RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W ATO3Q12359 275 aa1.21□□□□□ -2.22
BER1YLR412W SWI1P09547 1314 aa1.2□□□□□ -2.22
BER1YLR412W HIS1P00498 297 aaKnown RBP1.2□□□□□ -2.22
BER1YLR412W Q0255P03881 472 aa1.2□□□□□ -2.22
BER1YLR412W FBA1P14540 359 aaKnown RBP1.2□□□□□ -2.22
BER1YLR412W PEX4P29340 183 aa1.2□□□□□ -2.22
BER1YLR412W YHR125WP38831 101 aa1.2□□□□□ -2.22
BER1YLR412W PEX18P38855 283 aa1.2□□□□□ -2.22
BER1YLR412W DDI1P40087 428 aa1.2□□□□□ -2.22
BER1YLR412W EGD1Q02642 157 aaKnown RBP1.2□□□□□ -2.22
BER1YLR412W OST6Q03723 332 aa1.2□□□□□ -2.22
BER1YLR412W MRPS8Q03799 155 aa1.2□□□□□ -2.22
BER1YLR412W FKS1P38631 1876 aaKnown RBP1.2□□□□□ -2.22
BER1YLR412W SSK22P25390 1331 aaPredicted RBP1.19□□□□□ -2.22
BER1YLR412W SSA3P09435 649 aaKnown RBP1.19□□□□□ -2.22
BER1YLR412W DAL80P26343 269 aa1.19□□□□□ -2.22
BER1YLR412W QRI5P32344 111 aa1.19□□□□□ -2.22
BER1YLR412W DOG1P38774 246 aa1.19□□□□□ -2.22
BER1YLR412W DSN1P40568 576 aa1.19□□□□□ -2.22
BER1YLR412W CTF19Q02732 369 aa1.19□□□□□ -2.22
BER1YLR412W YOL162WP0CF19 215 aa1.18□□□□□ -2.22
BER1YLR412W MSA2P36157 363 aa1.18□□□□□ -2.22
BER1YLR412W CTR2P38865 189 aa1.18□□□□□ -2.22
BER1YLR412W YER189WP40104 122 aa1.18□□□□□ -2.22
BER1YLR412W YGR026WP53217 278 aa1.18□□□□□ -2.22
BER1YLR412W YDR124WQ04608 324 aa1.18□□□□□ -2.22
BER1YLR412W YPR147CQ06522 304 aaKnown RBP1.18□□□□□ -2.22
BER1YLR412W AKR2Q12013 749 aa1.18□□□□□ -2.22
BER1YLR412W YLR462WO13556 202 aa1.17□□□□□ -2.22
BER1YLR412W DSF1P0CX08 502 aa1.17□□□□□ -2.22
BER1YLR412W YNR073CP0CX09 502 aa1.17□□□□□ -2.22
BER1YLR412W VPS3P23643 1011 aa1.17□□□□□ -2.22
BER1YLR412W YEL075CP39972 122 aa1.17□□□□□ -2.22
BER1YLR412W YER135CP40082 130 aa1.17□□□□□ -2.22
BER1YLR412W BMT5P40493 336 aa1.17□□□□□ -2.22
BER1YLR412W SNZ3P43545 298 aa1.17□□□□□ -2.22
BER1YLR412W CIS3P47001 227 aa1.17□□□□□ -2.22
BER1YLR412W KAP114P53067 1004 aa1.17□□□□□ -2.22
BER1YLR412W CYT2Q00873 224 aa1.17□□□□□ -2.22
BER1YLR412W YMR279CQ03263 540 aa1.17□□□□□ -2.22
BER1YLR412W COX5AP00424 153 aa1.16□□□□□ -2.22
BER1YLR412W VMA11P32842 164 aa1.16□□□□□ -2.22
BER1YLR412W YKR045CP36138 183 aa1.16□□□□□ -2.22
BER1YLR412W PHO88P38264 188 aaPredicted RBP1.16□□□□□ -2.22
BER1YLR412W MRH4P53166 561 aa1.16□□□□□ -2.22
BER1YLR412W GOT1Q03554 138 aa1.16□□□□□ -2.22
BER1YLR412W SNF8Q12483 233 aa1.16□□□□□ -2.22
BER1YLR412W MDH3P32419 343 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
BER1YLR412W JEN1P36035 616 aa1.15□□□□□ -2.23
BER1YLR412W YHR022CP38763 256 aa1.15□□□□□ -2.23
BER1YLR412W PRM10P42946 383 aa1.15□□□□□ -2.23
BER1YLR412W ERG25P53045 309 aa1.15□□□□□ -2.23
BER1YLR412W YGL159WP53110 370 aa1.15□□□□□ -2.23
BER1YLR412W YGR219WP53307 113 aa1.15□□□□□ -2.23
BER1YLR412W ERV25P54837 211 aaKnown RBP1.15□□□□□ -2.23
BER1YLR412W ATG17Q06410 417 aa1.15□□□□□ -2.23
BER1YLR412W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
BER1YLR412W YLR030WQ07967 263 aa1.15□□□□□ -2.23
BER1YLR412W COQ10Q08058 207 aa1.15□□□□□ -2.23
BER1YLR412W SYC1Q08553 188 aaPredicted RBP1.15□□□□□ -2.23
BER1YLR412W DCN1Q12395 269 aa1.15□□□□□ -2.23
BER1YLR412W YKR104WP0CE69 306 aa1.14□□□□□ -2.23
BER1YLR412W MDH2P22133 377 aa1.14□□□□□ -2.23
BER1YLR412W EHD3P28817 500 aa1.14□□□□□ -2.23
BER1YLR412W ERG24P32462 438 aaKnown RBP1.14□□□□□ -2.23
BER1YLR412W PRS2P38620 318 aaKnown RBP1.14□□□□□ -2.23
BER1YLR412W VTC1P40046 129 aaRIP-Chip data1.14□□□□□ -2.23not detected
BER1YLR412W ALG11P53954 548 aaKnown RBP1.14□□□□□ -2.23
BER1YLR412W FAR8Q05040 523 aa1.14□□□□□ -2.23
BER1YLR412W INM2Q05533 292 aa1.14□□□□□ -2.23
BER1YLR412W COX2P00410 251 aa1.13□□□□□ -2.23
BER1YLR412W MRP1P10662 321 aaKnown RBP1.13□□□□□ -2.23
BER1YLR412W OAC1P32332 324 aa1.13□□□□□ -2.23
BER1YLR412W DSE2P38844 325 aa1.13□□□□□ -2.23
BER1YLR412W EMC2P47133 292 aaKnown RBP1.13□□□□□ -2.23
BER1YLR412W DDI2P0CH63 225 aa1.12□□□□□ -2.23
BER1YLR412W DDI3P0CH64 225 aa1.12□□□□□ -2.23
BER1YLR412W ERV15P38312 142 aa1.12□□□□□ -2.23
BER1YLR412W YBR219CP38317 127 aa1.12□□□□□ -2.23
BER1YLR412W RRF1P38771 230 aa1.12□□□□□ -2.23
BER1YLR412W SMB1P40018 196 aaKnown RBP1.12□□□□□ -2.23
BER1YLR412W THO1P40040 218 aaKnown RBP1.12□□□□□ -2.23
BER1YLR412W GLE2P40066 365 aa1.12□□□□□ -2.23
BER1YLR412W SNZ2P53824 298 aa1.12□□□□□ -2.23
BER1YLR412W COX20Q04935 205 aa1.12□□□□□ -2.23
BER1YLR412W RRP40Q08285 240 aaKnown RBP1.12□□□□□ -2.23
BER1YLR412W YOR186WQ08560 144 aa1.12□□□□□ -2.23
BER1YLR412W RPL24AP04449 155 aaKnown RBP1.11□□□□□ -2.23
BER1YLR412W RPL9AP05738 191 aaKnown RBP1.11□□□□□ -2.23
BER1YLR412W MRPL39P36533 70 aa1.11□□□□□ -2.23
BER1YLR412W FZO1P38297 855 aa1.11□□□□□ -2.23
BER1YLR412W YKE4P40544 346 aa1.11□□□□□ -2.23
BER1YLR412W RPL9BP51401 191 aaKnown RBP1.11□□□□□ -2.23
BER1YLR412W GTR2P53290 341 aa1.11□□□□□ -2.23
BER1YLR412W NUP49Q02199 472 aa1.11□□□□□ -2.23
BER1YLR412W SPG4Q04438 115 aa1.11□□□□□ -2.23
BER1YLR412W YPR098CQ06089 161 aa1.11□□□□□ -2.23
BER1YLR412W SIR4P11978 1358 aa1.1□□□□□ -2.23
BER1YLR412W SGE1P33335 543 aa1.1□□□□□ -2.23
BER1YLR412W MRPL37P36532 105 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms