RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C APL3P38065 1025 aa8.03□□□□□ -1.12
SEC61YLR378C YEL057CP39983 233 aa8.03□□□□□ -1.12
SEC61YLR378C PHB1P40961 287 aa8.03□□□□□ -1.12
SEC61YLR378C CIN2P46670 268 aa8.03□□□□□ -1.12
SEC61YLR378C VBA1Q04301 562 aa8.03□□□□□ -1.12
SEC61YLR378C MSL5Q12186 476 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
SEC61YLR378C IZH2Q12442 317 aa8.03□□□□□ -1.12
SEC61YLR378C PRM4Q12498 284 aa8.03□□□□□ -1.12
SEC61YLR378C RPL30P14120 105 aaKnown RBP8.02□□□□□ -1.13
SEC61YLR378C PCL1P24867 279 aa8.02□□□□□ -1.13
SEC61YLR378C VMA5P31412 392 aaKnown RBP8.02□□□□□ -1.13
SEC61YLR378C GTF1P53260 183 aaPredicted RBP8.02□□□□□ -1.13
SEC61YLR378C YNR040WP53736 256 aa8.02□□□□□ -1.13
SEC61YLR378C HHT1P61830 136 aa8.02□□□□□ -1.13
SEC61YLR378C YLR352WQ06479 807 aa8.02□□□□□ -1.13
SEC61YLR378C TMS1Q12116 473 aa8.02□□□□□ -1.13
SEC61YLR378C USB1Q12208 290 aaKnown RBP8.02□□□□□ -1.13
SEC61YLR378C ARG80P07249 177 aa8.01□□□□□ -1.13
SEC61YLR378C DSF1P0CX08 502 aa8.01□□□□□ -1.13
SEC61YLR378C YNR073CP0CX09 502 aa8.01□□□□□ -1.13
SEC61YLR378C MRP17P28778 131 aa8.01□□□□□ -1.13
SEC61YLR378C ARO4P32449 370 aaKnown RBP8.01□□□□□ -1.13
SEC61YLR378C MTC7P32633 139 aa8.01□□□□□ -1.13
SEC61YLR378C MRPL27P36526 146 aaPredicted RBP8.01□□□□□ -1.13
SEC61YLR378C RPS0BP46654 252 aaKnown RBP8.01□□□□□ -1.13
SEC61YLR378C TNA1P53322 534 aa8.01□□□□□ -1.13
SEC61YLR378C MRX9Q07349 420 aaKnown RBP8.01□□□□□ -1.13
SEC61YLR378C YER137CP40083 148 aaKnown RBP8□□□□□ -1.13
SEC61YLR378C GNA1P43577 159 aaPredicted RBP8□□□□□ -1.13
SEC61YLR378C PHB2P50085 310 aa8□□□□□ -1.13
SEC61YLR378C SKP1P52286 194 aa8□□□□□ -1.13
SEC61YLR378C ACS2P52910 683 aaKnown RBP8□□□□□ -1.13
SEC61YLR378C RPN14P53196 417 aa8□□□□□ -1.13
SEC61YLR378C SUR7P54003 302 aa8□□□□□ -1.13
SEC61YLR378C RCE1Q03530 315 aa8□□□□□ -1.13
SEC61YLR378C RAF1Q06891 181 aa8□□□□□ -1.13
SEC61YLR378C YNG1Q08465 219 aa8□□□□□ -1.13
SEC61YLR378C ERP4Q12450 207 aa8□□□□□ -1.13
SEC61YLR378C SPS4P09937 338 aa7.99□□□□□ -1.13
SEC61YLR378C HNM1P19807 563 aa7.99□□□□□ -1.13
SEC61YLR378C IFM1P25038 676 aa7.99□□□□□ -1.13
SEC61YLR378C YKL063CP35725 167 aa7.99□□□□□ -1.13
SEC61YLR378C PAN3P36102 679 aaPredicted RBP7.99□□□□□ -1.13
SEC61YLR378C SWM2P40342 146 aa7.99□□□□□ -1.13
SEC61YLR378C MOB2P43563 287 aa7.99□□□□□ -1.13
SEC61YLR378C ORM1P53224 222 aa7.99□□□□□ -1.13
SEC61YLR378C COA4Q05809 96 aa7.99□□□□□ -1.13
SEC61YLR378C PET20Q99373 253 aa7.99□□□□□ -1.13
SEC61YLR378C PHO2P07269 559 aa7.98□□□□□ -1.13
SEC61YLR378C RPL35AP0CX84 120 aaKnown RBP7.98□□□□□ -1.13
SEC61YLR378C RPL35BP0CX85 120 aaKnown RBP7.98□□□□□ -1.13
SEC61YLR378C CPR4P25334 318 aa7.98□□□□□ -1.13
SEC61YLR378C ACB1P31787 87 aa7.98□□□□□ -1.13
SEC61YLR378C VAM7P32912 316 aa7.98□□□□□ -1.13
SEC61YLR378C YGL015CP33199 130 aa7.98□□□□□ -1.13
SEC61YLR378C ATF1P40353 525 aa7.98□□□□□ -1.13
SEC61YLR378C QDR1P40475 563 aa7.98□□□□□ -1.13
SEC61YLR378C ECM27P47144 725 aa7.98□□□□□ -1.13
SEC61YLR378C TYW3P53177 273 aa7.98□□□□□ -1.13
SEC61YLR378C YML018CQ03730 393 aa7.98□□□□□ -1.13
SEC61YLR378C YLR224WQ05947 369 aa7.98□□□□□ -1.13
SEC61YLR378C RFU1Q08003 200 aa7.98□□□□□ -1.13
SEC61YLR378C IRA2P19158 3079 aa7.98□□□□□ -1.13
SEC61YLR378C FLO10P36170 1169 aa7.97□□□□□ -1.13
SEC61YLR378C YND1P40009 630 aa7.97□□□□□ -1.13
SEC61YLR378C XBP1P40489 647 aa7.97□□□□□ -1.13
SEC61YLR378C SYG1P40528 902 aa7.97□□□□□ -1.13
SEC61YLR378C GPP1P41277 250 aaKnown RBP7.97□□□□□ -1.13
SEC61YLR378C NSA1P53136 463 aaPredicted RBP7.97□□□□□ -1.13
SEC61YLR378C YDR248CQ03786 193 aa7.97□□□□□ -1.13
SEC61YLR378C SPR28Q04921 423 aa7.97□□□□□ -1.13
SEC61YLR378C RTR2Q12378 196 aa7.97□□□□□ -1.13
SEC61YLR378C PET122P10355 254 aa7.96□□□□□ -1.13
SEC61YLR378C MCM1P11746 286 aa7.96□□□□□ -1.13
SEC61YLR378C DEG1P31115 442 aaKnown RBP7.96□□□□□ -1.13
SEC61YLR378C ERG3P32353 365 aa7.96□□□□□ -1.13
SEC61YLR378C ARO9P38840 513 aaPredicted RBP7.96□□□□□ -1.13
SEC61YLR378C MTC6P38849 526 aa7.96□□□□□ -1.13
SEC61YLR378C ALG9P53868 555 aaKnown RBP7.96□□□□□ -1.13
SEC61YLR378C SMX3P54999 86 aaPredicted RBP7.96□□□□□ -1.13
SEC61YLR378C TFB5Q3E7C1 72 aaPredicted RBP7.96□□□□□ -1.13
SEC61YLR378C CDC28P00546 298 aaKnown RBP7.95□□□□□ -1.14
SEC61YLR378C AAC1P04710 309 aa7.95□□□□□ -1.14
SEC61YLR378C RPS31P05759 152 aaKnown RBP7.95□□□□□ -1.14
SEC61YLR378C ARO3P14843 370 aaKnown RBP7.95□□□□□ -1.14
SEC61YLR378C MAG1P22134 296 aaKnown RBP7.95□□□□□ -1.14
SEC61YLR378C RFA1P22336 621 aaKnown RBP7.95□□□□□ -1.14
SEC61YLR378C YCR016WP25617 290 aaKnown RBP7.95□□□□□ -1.14
SEC61YLR378C FMT1P32785 401 aa7.95□□□□□ -1.14
SEC61YLR378C MRPS5P33759 307 aa7.95□□□□□ -1.14
SEC61YLR378C YMR262WP38430 313 aa7.95□□□□□ -1.14
SEC61YLR378C BFR1P38934 470 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
SEC61YLR378C PHM8P40025 321 aa7.95□□□□□ -1.14
SEC61YLR378C YGR210CP42942 411 aa7.95□□□□□ -1.14
SEC61YLR378C UFD1P53044 361 aa7.95□□□□□ -1.14
SEC61YLR378C YGL260WP53056 76 aa7.95□□□□□ -1.14
SEC61YLR378C LAP3Q01532 483 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
SEC61YLR378C PRM15Q03262 622 aa7.95□□□□□ -1.14
SEC61YLR378C YDR391CQ04170 232 aa7.95□□□□□ -1.14
SEC61YLR378C SEC16P48415 2195 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 130.2 ms