RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C ILV5P06168 395 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C TIR1P10863 254 aa2.12□□□□□ -2.07
VPS13YLL040C PAD1P33751 242 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
VPS13YLL040C YJR011CP47086 261 aaPredicted RBP2.12□□□□□ -2.07
VPS13YLL040C TIM11P81449 96 aaPredicted RBP2.12□□□□□ -2.07
VPS13YLL040C YLR456WQ06199 204 aa2.12□□□□□ -2.07
VPS13YLL040C YOR387CQ08910 206 aa2.12□□□□□ -2.07
VPS13YLL040C RAD52P06778 471 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C ANS1P38832 159 aa2.12□□□□□ -2.07
VPS13YLL040C DAN1P47178 298 aa2.12□□□□□ -2.07
VPS13YLL040C SMM1P53720 384 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C RFU1Q08003 200 aa2.12□□□□□ -2.07
VPS13YLL040C UTP23Q12339 254 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C LSB5P25369 354 aa2.12□□□□□ -2.07
VPS13YLL040C RER1P25560 188 aa2.12□□□□□ -2.07
VPS13YLL040C CNE1P27825 502 aa2.12□□□□□ -2.07
VPS13YLL040C KAE1P36132 386 aa2.12□□□□□ -2.07
VPS13YLL040C AIM3P38266 947 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C AME1P38313 324 aa2.12□□□□□ -2.07
VPS13YLL040C GPI2P46961 280 aa2.12□□□□□ -2.07
VPS13YLL040C YBR298C-AQ8TGK4 73 aa2.12□□□□□ -2.07
VPS13YLL040C RAS1P01119 309 aa2.12□□□□□ -2.07
VPS13YLL040C SEC22P22214 214 aa2.12□□□□□ -2.07
VPS13YLL040C SUI1P32911 108 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C EDS1P38073 919 aa2.12□□□□□ -2.07
VPS13YLL040C LEM3P42838 414 aa2.12□□□□□ -2.07
VPS13YLL040C YDR248CQ03786 193 aa2.12□□□□□ -2.07
VPS13YLL040C ARX1Q03862 593 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C YMR31P19955 123 aa2.12□□□□□ -2.07
VPS13YLL040C QCR9P22289 66 aa2.12□□□□□ -2.07
VPS13YLL040C GSH1P32477 678 aa2.12□□□□□ -2.07
VPS13YLL040C TAE1P38340 232 aa2.12□□□□□ -2.07
VPS13YLL040C YHR122WP38829 231 aa2.12□□□□□ -2.07
VPS13YLL040C TAT2P38967 592 aa2.12□□□□□ -2.07
VPS13YLL040C RPS22BQ3E7Y3 130 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C RPS20P38701 121 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C MOB2P43563 287 aa2.11□□□□□ -2.07
VPS13YLL040C SLX9P53251 210 aaPredicted RBP2.11□□□□□ -2.07
VPS13YLL040C YVH1Q02256 364 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C ECM18Q04623 453 aa2.11□□□□□ -2.07
VPS13YLL040C RBK1P25332 333 aa2.11□□□□□ -2.07
VPS13YLL040C GPI14P47088 403 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C NUP42P49686 430 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C RIB4P50861 169 aaPredicted RBP2.11□□□□□ -2.07
VPS13YLL040C YGL114WP53134 725 aa2.11□□□□□ -2.07
VPS13YLL040C YNR062CP53748 327 aa2.11□□□□□ -2.07
VPS13YLL040C HRP1Q99383 534 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C RPB3P16370 318 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C SKN1P33336 771 aa2.11□□□□□ -2.07
VPS13YLL040C SDH3P33421 198 aa2.11□□□□□ -2.07
VPS13YLL040C MKS1P34072 584 aa2.11□□□□□ -2.07
VPS13YLL040C CYB5P40312 120 aa2.11□□□□□ -2.07
VPS13YLL040C YIF1P53845 314 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C HXT15P54854 567 aa2.11□□□□□ -2.07
VPS13YLL040C MET31Q03081 177 aa2.11□□□□□ -2.07
VPS13YLL040C HRD1Q08109 551 aa2.11□□□□□ -2.07
VPS13YLL040C TFB5Q3E7C1 72 aaPredicted RBP2.11□□□□□ -2.07
VPS13YLL040C MAG1P22134 296 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C DAL80P26343 269 aa2.11□□□□□ -2.07
VPS13YLL040C DCG1P32460 244 aa2.11□□□□□ -2.07
VPS13YLL040C AIM2P39721 246 aa2.11□□□□□ -2.07
VPS13YLL040C EMC5P40540 141 aa2.11□□□□□ -2.07
VPS13YLL040C TAD2P47058 250 aa2.11□□□□□ -2.07
VPS13YLL040C UFD1P53044 361 aa2.11□□□□□ -2.07
VPS13YLL040C PNG1Q02890 363 aa2.11□□□□□ -2.07
VPS13YLL040C GRX2P17695 143 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C YKL187CP34231 750 aa2.11□□□□□ -2.07
VPS13YLL040C PRY2P36110 329 aa2.11□□□□□ -2.07
VPS13YLL040C IRC24P40580 263 aa2.11□□□□□ -2.07
VPS13YLL040C OTU1P43558 301 aa2.11□□□□□ -2.07
VPS13YLL040C RAD28Q12021 506 aa2.11□□□□□ -2.07
VPS13YLL040C YPR145C-AQ2V2P0 78 aa2.11□□□□□ -2.07
VPS13YLL040C PHO2P07269 559 aa2.11□□□□□ -2.07
VPS13YLL040C RPS22AP0C0W1 130 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C HNM1P19807 563 aa2.11□□□□□ -2.07
VPS13YLL040C OLE1P21147 510 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C FMP10P40098 244 aa2.11□□□□□ -2.07
VPS13YLL040C PAU5P43575 122 aa2.11□□□□□ -2.07
VPS13YLL040C UBX6P47049 396 aa2.11□□□□□ -2.07
VPS13YLL040C YPR098CQ06089 161 aa2.11□□□□□ -2.07
VPS13YLL040C YHR138CP38841 114 aaPredicted RBP2.11□□□□□ -2.07
VPS13YLL040C GZF3P42944 551 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C ERJ5P43613 295 aaPredicted RBP2.11□□□□□ -2.07
VPS13YLL040C SNN1P48232 102 aa2.11□□□□□ -2.07
VPS13YLL040C MNN10P50108 393 aaKnown RBP2.11□□□□□ -2.07
VPS13YLL040C YNR064CP53750 290 aa2.11□□□□□ -2.07
VPS13YLL040C TVP18Q04767 167 aa2.11□□□□□ -2.07
VPS13YLL040C TMA10Q06177 86 aa2.11□□□□□ -2.07
VPS13YLL040C AIM6Q07716 390 aa2.11□□□□□ -2.07
VPS13YLL040C YPR108W-AQ3E7B3 70 aa2.11□□□□□ -2.07
VPS13YLL040C POP5P28005 173 aa2.1□□□□□ -2.07
VPS13YLL040C MTC4P38335 694 aaKnown RBP2.1□□□□□ -2.07
VPS13YLL040C SAS2P40963 338 aa2.1□□□□□ -2.07
VPS13YLL040C ARF3P40994 183 aaRIP-Chip data2.1□□□□□ -2.07 RIP-Chip
VPS13YLL040C IKS1P47042 667 aa2.1□□□□□ -2.07
VPS13YLL040C HMRA1P0CY11 126 aa2.1□□□□□ -2.07
VPS13YLL040C SOF1P33750 489 aaKnown RBP2.1□□□□□ -2.07
VPS13YLL040C YKL077WP36081 392 aa2.1□□□□□ -2.07
VPS13YLL040C WSC4P38739 605 aa2.1□□□□□ -2.07
VPS13YLL040C ASK10P48361 1146 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms