RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C CNL1Q06333 122 aa2.85□□□□□ -1.95
RPN1YHR027C YTM1Q12024 460 aaPredicted RBP2.85□□□□□ -1.95
RPN1YHR027C NBP2Q12163 236 aa2.85□□□□□ -1.95
RPN1YHR027C PRS5Q12265 496 aaKnown RBP2.85□□□□□ -1.95
RPN1YHR027C HAA1Q12753 694 aaKnown RBP2.85□□□□□ -1.95
RPN1YHR027C COX19Q3E731 98 aa2.85□□□□□ -1.95
RPN1YHR027C YCR075W-AQ3E830 75 aa2.85□□□□□ -1.95
RPN1YHR027C STT4P37297 1900 aa2.85□□□□□ -1.95
RPN1YHR027C MSF1P08425 469 aa2.85□□□□□ -1.95
RPN1YHR027C SPT15P13393 240 aaKnown RBP2.85□□□□□ -1.95
RPN1YHR027C MNS1P32906 549 aa2.85□□□□□ -1.95
RPN1YHR027C AGP2P38090 596 aa2.85□□□□□ -1.95
RPN1YHR027C WSS1P38838 269 aa2.85□□□□□ -1.95
RPN1YHR027C SEC72P39742 193 aaKnown RBP2.85□□□□□ -1.95
RPN1YHR027C AYR1P40471 297 aa2.85□□□□□ -1.95
RPN1YHR027C CAT5P41735 233 aa2.85□□□□□ -1.95
RPN1YHR027C GPI14P47088 403 aaKnown RBP2.85□□□□□ -1.95
RPN1YHR027C RIB4P50861 169 aaPredicted RBP2.85□□□□□ -1.95
RPN1YHR027C SPP2Q02521 185 aa2.85□□□□□ -1.95
RPN1YHR027C KEI1Q06346 221 aa2.85□□□□□ -1.95
RPN1YHR027C IRC10Q08118 586 aa2.85□□□□□ -1.95
RPN1YHR027C ALG6Q12001 544 aaKnown RBP2.85□□□□□ -1.95
RPN1YHR027C TY1A-NL1Q12391 440 aaKnown RBP2.85□□□□□ -1.95
RPN1YHR027C QCR2P07257 368 aa2.85□□□□□ -1.95
RPN1YHR027C COT1P32798 439 aa2.85□□□□□ -1.95
RPN1YHR027C MRPS9P38120 278 aa2.85□□□□□ -1.95
RPN1YHR027C CUE1P38428 203 aa2.85□□□□□ -1.95
RPN1YHR027C NDT80P38830 627 aa2.85□□□□□ -1.95
RPN1YHR027C YHR210CP38893 341 aa2.85□□□□□ -1.95
RPN1YHR027C VAC8P39968 578 aa2.85□□□□□ -1.95
RPN1YHR027C AVT7P40501 490 aa2.85□□□□□ -1.95
RPN1YHR027C MTO1P53070 669 aa2.85□□□□□ -1.95
RPN1YHR027C PUS6P53294 404 aa2.85□□□□□ -1.95
RPN1YHR027C SMM1P53720 384 aaKnown RBP2.85□□□□□ -1.95
RPN1YHR027C HPT1Q04178 221 aaKnown RBP2.85□□□□□ -1.95
RPN1YHR027C CRF1Q04930 467 aa2.85□□□□□ -1.95
RPN1YHR027C TDA6Q06466 467 aa2.85□□□□□ -1.95
RPN1YHR027C NOC4Q06512 552 aaPredicted RBP2.85□□□□□ -1.95
RPN1YHR027C GUD1Q07729 489 aa2.85□□□□□ -1.95
RPN1YHR027C THI72Q08579 599 aa2.85□□□□□ -1.95
RPN1YHR027C IRC13Q08630 104 aa2.85□□□□□ -1.95
RPN1YHR027C BTS1Q12051 335 aa2.85□□□□□ -1.95
RPN1YHR027C YPR027CQ12079 277 aa2.85□□□□□ -1.95
RPN1YHR027C COX3P00420 269 aa2.84□□□□□ -1.95
RPN1YHR027C RAS2P01120 322 aaKnown RBP2.84□□□□□ -1.95
RPN1YHR027C YER190C-BP0CX94 160 aa2.84□□□□□ -1.95
RPN1YHR027C YEL077W-AP0CX95 160 aa2.84□□□□□ -1.95
RPN1YHR027C YGR296C-BP0CX96 160 aa2.84□□□□□ -1.95
RPN1YHR027C YPL283W-BP0CX97 160 aa2.84□□□□□ -1.95
RPN1YHR027C YPR204C-AP0CX98 160 aa2.84□□□□□ -1.95
RPN1YHR027C APE1P14904 514 aa2.84□□□□□ -1.95
RPN1YHR027C COX13P32799 129 aa2.84□□□□□ -1.95
RPN1YHR027C CDC40P40968 455 aaPredicted RBP2.84□□□□□ -1.95
RPN1YHR027C NIF3P53081 288 aa2.84□□□□□ -1.95
RPN1YHR027C AGE1Q04412 482 aa2.84□□□□□ -1.95
RPN1YHR027C ADH6Q04894 360 aaKnown RBP2.84□□□□□ -1.95
RPN1YHR027C SHS1Q07657 551 aa2.84□□□□□ -1.95
RPN1YHR027C AIM7Q12156 149 aa2.84□□□□□ -1.95
RPN1YHR027C RRG1Q12167 365 aaPredicted RBP2.84□□□□□ -1.95
RPN1YHR027C TRM13Q12383 476 aa2.84□□□□□ -1.95
RPN1YHR027C YPR015CQ12531 247 aa2.84□□□□□ -1.95
RPN1YHR027C IZH4Q99393 312 aa2.84□□□□□ -1.95
RPN1YHR027C GAL7P08431 366 aa2.84□□□□□ -1.96
RPN1YHR027C SAG1P20840 650 aa2.84□□□□□ -1.96
RPN1YHR027C OLE1P21147 510 aaKnown RBP2.84□□□□□ -1.96
RPN1YHR027C FEN2P25621 512 aaKnown RBP2.84□□□□□ -1.96
RPN1YHR027C TIP20P33891 701 aa2.84□□□□□ -1.96
RPN1YHR027C YKL102CP34249 101 aa2.84□□□□□ -1.96
RPN1YHR027C PTK1P36002 662 aaPredicted RBP2.84□□□□□ -1.96
RPN1YHR027C WSC4P38739 605 aa2.84□□□□□ -1.96
RPN1YHR027C AXL2P38928 823 aa2.84□□□□□ -1.96
RPN1YHR027C SPC25P40014 221 aa2.84□□□□□ -1.96
RPN1YHR027C YER121WP40076 114 aa2.84□□□□□ -1.96
RPN1YHR027C MOB1P40484 314 aa2.84□□□□□ -1.96
RPN1YHR027C MAF1P41910 395 aa2.84□□□□□ -1.96
RPN1YHR027C SPG5P42933 373 aa2.84□□□□□ -1.96
RPN1YHR027C AVT1P47082 602 aa2.84□□□□□ -1.96
RPN1YHR027C YJR015WP47090 510 aa2.84□□□□□ -1.96
RPN1YHR027C STE24P47154 453 aa2.84□□□□□ -1.96
RPN1YHR027C MSB3P48566 633 aaPredicted RBP2.84□□□□□ -1.96
RPN1YHR027C SGF73P53165 657 aa2.84□□□□□ -1.96
RPN1YHR027C THG1P53215 237 aaKnown RBP2.84□□□□□ -1.96
RPN1YHR027C YNR014WP53719 212 aa2.84□□□□□ -1.96
RPN1YHR027C SMX3P54999 86 aaPredicted RBP2.84□□□□□ -1.96
RPN1YHR027C GIS1Q03833 894 aa2.84□□□□□ -1.96
RPN1YHR027C TY1A-DR2Q03964 440 aaKnown RBP2.84□□□□□ -1.96
RPN1YHR027C TY1A-MR1Q04215 440 aa2.84□□□□□ -1.96
RPN1YHR027C YML053CQ04978 212 aa2.84□□□□□ -1.96
RPN1YHR027C MCH1Q07376 486 aa2.84□□□□□ -1.96
RPN1YHR027C DCI1Q08558 271 aa2.84□□□□□ -1.96
RPN1YHR027C FCF2Q12035 217 aaPredicted RBP2.84□□□□□ -1.96
RPN1YHR027C WTM2Q12206 467 aa2.84□□□□□ -1.96
RPN1YHR027C TY1A-BLQ12266 440 aa2.84□□□□□ -1.96
RPN1YHR027C HUT1Q12520 339 aa2.84□□□□□ -1.96
RPN1YHR027C FOL3Q12676 427 aaPredicted RBP2.84□□□□□ -1.96
RPN1YHR027C CDC9P04819 755 aa2.83□□□□□ -1.96
RPN1YHR027C SRD1P09007 221 aa2.83□□□□□ -1.96
RPN1YHR027C YIH1P25637 258 aa2.83□□□□□ -1.96
RPN1YHR027C URK1P27515 501 aa2.83□□□□□ -1.96
RPN1YHR027C HOG1P32485 435 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms