RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W BOS1P25385 244 aa4.85□□□□□ -1.63
VMA16YHR026W PRE4P30657 266 aa4.85□□□□□ -1.63
VMA16YHR026W RNP1P32385 249 aa4.85□□□□□ -1.63
VMA16YHR026W YMR262WP38430 313 aa4.85□□□□□ -1.63
VMA16YHR026W HTD2P38790 280 aaKnown RBP4.85□□□□□ -1.63
VMA16YHR026W PTH1P38876 190 aaKnown RBP4.85□□□□□ -1.63
VMA16YHR026W SMB1P40018 196 aaKnown RBP4.85□□□□□ -1.63
VMA16YHR026W GPP2P40106 250 aaKnown RBP4.85□□□□□ -1.63
VMA16YHR026W GAT2P40209 560 aa4.85□□□□□ -1.63
VMA16YHR026W HXT9P40885 567 aa4.85□□□□□ -1.63
VMA16YHR026W YLR460CP54007 376 aa4.85□□□□□ -1.63
VMA16YHR026W HXT11P54862 567 aa4.85□□□□□ -1.63
VMA16YHR026W GIS1Q03833 894 aa4.85□□□□□ -1.63
VMA16YHR026W MRPL1Q04599 285 aa4.85□□□□□ -1.63
VMA16YHR026W YMR252CQ04814 134 aa4.85□□□□□ -1.63
VMA16YHR026W MRPL51Q06090 140 aaPredicted RBP4.85□□□□□ -1.63
VMA16YHR026W COQ10Q08058 207 aa4.85□□□□□ -1.63
VMA16YHR026W BTS1Q12051 335 aa4.85□□□□□ -1.63
VMA16YHR026W MCP1Q12106 302 aa4.85□□□□□ -1.63
VMA16YHR026W RTC5Q12108 567 aaKnown RBP4.85□□□□□ -1.63
VMA16YHR026W TIR4Q12218 487 aaPredicted RBP4.85□□□□□ -1.63
VMA16YHR026W BBP1Q12365 385 aa4.85□□□□□ -1.63
VMA16YHR026W BLM10P43583 2143 aa4.85□□□□□ -1.63
VMA16YHR026W RPI1P23250 407 aaKnown RBP4.84□□□□□ -1.63
VMA16YHR026W YCR016WP25617 290 aaKnown RBP4.84□□□□□ -1.63
VMA16YHR026W MDH3P32419 343 aaKnown RBP RIP-Chip data4.84□□□□□ -1.63not detected
VMA16YHR026W NSG1P38837 291 aa4.84□□□□□ -1.63
VMA16YHR026W FET3P38993 636 aa4.84□□□□□ -1.63
VMA16YHR026W SWM2P40342 146 aa4.84□□□□□ -1.63
VMA16YHR026W POP1P41812 875 aa4.84□□□□□ -1.63
VMA16YHR026W PGU1P47180 361 aa4.84□□□□□ -1.63
VMA16YHR026W TAF4P50105 388 aa4.84□□□□□ -1.63
VMA16YHR026W YGR151CP53287 111 aa4.84□□□□□ -1.63
VMA16YHR026W RHO5P53879 331 aaKnown RBP4.84□□□□□ -1.63
VMA16YHR026W DCR2Q05924 578 aa4.84□□□□□ -1.63
VMA16YHR026W KEI1Q06346 221 aa4.84□□□□□ -1.63
VMA16YHR026W HNT3Q08702 217 aa4.84□□□□□ -1.63
VMA16YHR026W RLM1Q12224 676 aa4.84□□□□□ -1.63
VMA16YHR026W FSH3Q99369 266 aa4.84□□□□□ -1.63
VMA16YHR026W TAD3Q9URQ3 322 aa4.84□□□□□ -1.63
VMA16YHR026W CDC43P18898 376 aa4.83□□□□□ -1.64
VMA16YHR026W AIM17P23180 465 aaKnown RBP4.83□□□□□ -1.64
VMA16YHR026W RNA14P25298 677 aaKnown RBP4.83□□□□□ -1.64
VMA16YHR026W CWH43P25618 953 aa4.83□□□□□ -1.64
VMA16YHR026W EMP70P32802 667 aa4.83□□□□□ -1.64
VMA16YHR026W APL3P38065 1025 aa4.83□□□□□ -1.64
VMA16YHR026W APD1P38281 316 aa4.83□□□□□ -1.64
VMA16YHR026W PEX32P38292 413 aa4.83□□□□□ -1.64
VMA16YHR026W RRF1P38771 230 aa4.83□□□□□ -1.64
VMA16YHR026W PAM16P42949 149 aa4.83□□□□□ -1.64
VMA16YHR026W NIT2P47016 307 aa4.83□□□□□ -1.64
VMA16YHR026W ECM27P47144 725 aa4.83□□□□□ -1.64
VMA16YHR026W MTM1P53320 366 aa4.83□□□□□ -1.64
VMA16YHR026W SAY1P53324 424 aa4.83□□□□□ -1.64
VMA16YHR026W MPA43P53583 542 aaPredicted RBP4.83□□□□□ -1.64
VMA16YHR026W APM1Q00776 475 aaPredicted RBP4.83□□□□□ -1.64
VMA16YHR026W NGL2Q03264 515 aaKnown RBP4.83□□□□□ -1.64
VMA16YHR026W SCS7Q03529 384 aa4.83□□□□□ -1.64
VMA16YHR026W EKI1Q03764 534 aa4.83□□□□□ -1.64
VMA16YHR026W HRI1Q05905 244 aaKnown RBP4.83□□□□□ -1.64
VMA16YHR026W YDL086WQ07505 273 aa4.83□□□□□ -1.64
VMA16YHR026W YOR378WQ08902 515 aa4.83□□□□□ -1.64
VMA16YHR026W FRE3Q08905 711 aa4.83□□□□□ -1.64
VMA16YHR026W INP53Q12271 1107 aa4.83□□□□□ -1.64
VMA16YHR026W URA3P03962 267 aa4.82□□□□□ -1.64
VMA16YHR026W ARG80P07249 177 aa4.82□□□□□ -1.64
VMA16YHR026W SEN2P16658 377 aa4.82□□□□□ -1.64
VMA16YHR026W ERG24P32462 438 aaKnown RBP4.82□□□□□ -1.64
VMA16YHR026W MSS1P32559 526 aaPredicted RBP4.82□□□□□ -1.64
VMA16YHR026W PAD1P33751 242 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
VMA16YHR026W SDS24P38314 527 aa4.82□□□□□ -1.64
VMA16YHR026W MTC4P38335 694 aaKnown RBP4.82□□□□□ -1.64
VMA16YHR026W YHR122WP38829 231 aa4.82□□□□□ -1.64
VMA16YHR026W VMA7P39111 118 aa4.82□□□□□ -1.64
VMA16YHR026W YJL193WP39542 402 aa4.82□□□□□ -1.64
VMA16YHR026W SEN34P39707 275 aa4.82□□□□□ -1.64
VMA16YHR026W PHM8P40025 321 aa4.82□□□□□ -1.64
VMA16YHR026W RFC4P40339 323 aaKnown RBP4.82□□□□□ -1.64
VMA16YHR026W SYS1P41544 203 aa4.82□□□□□ -1.64
VMA16YHR026W GIM3P53900 129 aa4.82□□□□□ -1.64
VMA16YHR026W UTP15Q04305 513 aaKnown RBP4.82□□□□□ -1.64
VMA16YHR026W MRX8Q05473 314 aa4.82□□□□□ -1.64
VMA16YHR026W RBS1Q05672 457 aaKnown RBP4.82□□□□□ -1.64
VMA16YHR026W SEI1Q06058 285 aa4.82□□□□□ -1.64
VMA16YHR026W RDR1Q08904 546 aa4.82□□□□□ -1.64
VMA16YHR026W ATG31Q12421 196 aa4.82□□□□□ -1.64
VMA16YHR026W ADK1P07170 222 aaKnown RBP4.81□□□□□ -1.64
VMA16YHR026W MATALPHA1P0CY06 175 aa4.81□□□□□ -1.64
VMA16YHR026W HMLALPHA1P0CY07 175 aa4.81□□□□□ -1.64
VMA16YHR026W ARF1P11076 181 aaKnown RBP4.81□□□□□ -1.64
VMA16YHR026W UTR1P21373 530 aa4.81□□□□□ -1.64
VMA16YHR026W STE50P25344 346 aa4.81□□□□□ -1.64
VMA16YHR026W CNE1P27825 502 aa4.81□□□□□ -1.64
VMA16YHR026W SPT10P35208 640 aa4.81□□□□□ -1.64
VMA16YHR026W ELF1P36053 145 aa4.81□□□□□ -1.64
VMA16YHR026W SRP102P36057 244 aaPredicted RBP4.81□□□□□ -1.64
VMA16YHR026W NAT2P37293 288 aa4.81□□□□□ -1.64
VMA16YHR026W YHR180WP38868 163 aa4.81□□□□□ -1.64
VMA16YHR026W CAT5P41735 233 aa4.81□□□□□ -1.64
VMA16YHR026W YGR210CP42942 411 aa4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms