RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A SCS7Q03529 384 aa2.58□□□□□ -2
EFG1YGR271C-A YPL245WQ12179 454 aaKnown RBP2.58□□□□□ -2
EFG1YGR271C-A YDR018CQ12185 396 aa2.58□□□□□ -2
EFG1YGR271C-A HMS1Q12398 434 aa2.58□□□□□ -2
EFG1YGR271C-A COX4P04037 155 aa2.57□□□□□ -2
EFG1YGR271C-A PHO80P20052 293 aa2.57□□□□□ -2
EFG1YGR271C-A HMT1P38074 348 aa2.57□□□□□ -2
EFG1YGR271C-A DER1P38307 211 aa2.57□□□□□ -2
EFG1YGR271C-A OM14P38325 134 aa2.57□□□□□ -2
EFG1YGR271C-A LSM12P38828 187 aaKnown RBP2.57□□□□□ -2
EFG1YGR271C-A CHL4P38907 458 aa2.57□□□□□ -2
EFG1YGR271C-A PEX22P39718 180 aa2.57□□□□□ -2
EFG1YGR271C-A GIM4P40005 111 aaKnown RBP2.57□□□□□ -2
EFG1YGR271C-A SOK1P40317 901 aa2.57□□□□□ -2
EFG1YGR271C-A HAC1P41546 238 aa2.57□□□□□ -2
EFG1YGR271C-A PGU1P47180 361 aa2.57□□□□□ -2
EFG1YGR271C-A BNS1P50084 137 aa2.57□□□□□ -2
EFG1YGR271C-A JAC1P53193 184 aa2.57□□□□□ -2
EFG1YGR271C-A COG7P53195 279 aa2.57□□□□□ -2
EFG1YGR271C-A YGR018CP53211 109 aa2.57□□□□□ -2
EFG1YGR271C-A PDR17P53844 350 aa2.57□□□□□ -2
EFG1YGR271C-A MRPS16Q02608 121 aa2.57□□□□□ -2
EFG1YGR271C-A YDC1Q02896 317 aa2.57□□□□□ -2
EFG1YGR271C-A YMR279CQ03263 540 aa2.57□□□□□ -2
EFG1YGR271C-A INM2Q05533 292 aa2.57□□□□□ -2
EFG1YGR271C-A SEI1Q06058 285 aa2.57□□□□□ -2
EFG1YGR271C-A GAS2Q06135 555 aa2.57□□□□□ -2
EFG1YGR271C-A RPN8Q08723 338 aaKnown RBP2.57□□□□□ -2
EFG1YGR271C-A NSL1Q12143 216 aa2.57□□□□□ -2
EFG1YGR271C-A LSO2Q3E772 92 aaKnown RBP2.57□□□□□ -2
EFG1YGR271C-A PET20Q99373 253 aa2.57□□□□□ -2
EFG1YGR271C-A MHP1P43638 1398 aa2.57□□□□□ -2
EFG1YGR271C-A MET2P08465 486 aa2.56□□□□□ -2
EFG1YGR271C-A YKR104WP0CE69 306 aa2.56□□□□□ -2
EFG1YGR271C-A ASP3-2P0CX77 362 aa2.56□□□□□ -2
EFG1YGR271C-A ASP3-3P0CX78 362 aa2.56□□□□□ -2
EFG1YGR271C-A ASP3-4P0CX79 362 aa2.56□□□□□ -2
EFG1YGR271C-A ASP3-1P0CZ17 362 aa2.56□□□□□ -2
EFG1YGR271C-A RPL4AP10664 362 aaKnown RBP2.56□□□□□ -2
EFG1YGR271C-A CPT1P17898 393 aa2.56□□□□□ -2
EFG1YGR271C-A URA10P30402 227 aa2.56□□□□□ -2
EFG1YGR271C-A LDS1P31379 325 aa2.56□□□□□ -2
EFG1YGR271C-A MRPL28P36527 147 aa2.56□□□□□ -2
EFG1YGR271C-A TIM17P39515 158 aa2.56□□□□□ -2
EFG1YGR271C-A HEM14P40012 539 aa2.56□□□□□ -2
EFG1YGR271C-A YMR144WP40214 342 aaKnown RBP2.56□□□□□ -2
EFG1YGR271C-A ICE2P40499 491 aa2.56□□□□□ -2
EFG1YGR271C-A ATG18P43601 500 aa2.56□□□□□ -2
EFG1YGR271C-A RPL4BP49626 362 aaKnown RBP2.56□□□□□ -2
EFG1YGR271C-A TPC1P53257 314 aa2.56□□□□□ -2
EFG1YGR271C-A CLD1P53264 445 aa2.56□□□□□ -2
EFG1YGR271C-A NRM1P53718 249 aa2.56□□□□□ -2
EFG1YGR271C-A NUP49Q02199 472 aa2.56□□□□□ -2
EFG1YGR271C-A ABF2Q02486 183 aa2.56□□□□□ -2
EFG1YGR271C-A SPG4Q04438 115 aa2.56□□□□□ -2
EFG1YGR271C-A NOC4Q06512 552 aaPredicted RBP2.56□□□□□ -2
EFG1YGR271C-A ATP16Q12165 160 aa2.56□□□□□ -2
EFG1YGR271C-A USB1Q12208 290 aaKnown RBP2.56□□□□□ -2
EFG1YGR271C-A MRX4Q12467 430 aa2.56□□□□□ -2
EFG1YGR271C-A AGC1Q12482 902 aa2.56□□□□□ -2
EFG1YGR271C-A YMR316C-AI2HB70 103 aa2.55□□□□□ -2
EFG1YGR271C-A RPS14AP06367 137 aaKnown RBP2.55□□□□□ -2
EFG1YGR271C-A STE7P06784 515 aa2.55□□□□□ -2
EFG1YGR271C-A YOL163WP0CF20 169 aa2.55□□□□□ -2
EFG1YGR271C-A DPM1P14020 267 aaKnown RBP2.55□□□□□ -2
EFG1YGR271C-A GIT1P25346 518 aa2.55□□□□□ -2
EFG1YGR271C-A MGT1P26188 188 aa2.55□□□□□ -2
EFG1YGR271C-A GPX1P36014 167 aa2.55□□□□□ -2
EFG1YGR271C-A MRPL39P36533 70 aa2.55□□□□□ -2
EFG1YGR271C-A ECM13P38195 257 aa2.55□□□□□ -2
EFG1YGR271C-A HEK2P38199 381 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
EFG1YGR271C-A YBR062CP38239 180 aa2.55□□□□□ -2
EFG1YGR271C-A RPS14BP39516 138 aaKnown RBP2.55□□□□□ -2
EFG1YGR271C-A RSM25P40496 264 aa2.55□□□□□ -2
EFG1YGR271C-A BIR1P47134 954 aa2.55□□□□□ -2
EFG1YGR271C-A BXI1P48558 297 aa2.55□□□□□ -2
EFG1YGR271C-A SBH2P52871 88 aa2.55□□□□□ -2
EFG1YGR271C-A YGL235WP53071 178 aa2.55□□□□□ -2
EFG1YGR271C-A YGR042WP53227 271 aa2.55□□□□□ -2
EFG1YGR271C-A YNR066CP53752 436 aa2.55□□□□□ -2
EFG1YGR271C-A SDC1Q03323 175 aa2.55□□□□□ -2
EFG1YGR271C-A UTP15Q04305 513 aaKnown RBP2.55□□□□□ -2
EFG1YGR271C-A FSH2Q05015 223 aa2.55□□□□□ -2
EFG1YGR271C-A YHC1Q05900 231 aaKnown RBP2.55□□□□□ -2
EFG1YGR271C-A GRX8Q05926 109 aa2.55□□□□□ -2
EFG1YGR271C-A LOA1Q06508 300 aa2.55□□□□□ -2
EFG1YGR271C-A YPR147CQ06522 304 aaKnown RBP2.55□□□□□ -2
EFG1YGR271C-A RRP40Q08285 240 aaKnown RBP2.55□□□□□ -2
EFG1YGR271C-A YLR050CQ12155 161 aaKnown RBP2.55□□□□□ -2
EFG1YGR271C-A SFM1Q12314 213 aa2.55□□□□□ -2
EFG1YGR271C-A EMP46Q12396 444 aa2.55□□□□□ -2
EFG1YGR271C-A ADH1P00330 348 aaKnown RBP2.54□□□□□ -2
EFG1YGR271C-A COX5AP00424 153 aa2.54□□□□□ -2
EFG1YGR271C-A RPS28BP0C0X0 67 aaKnown RBP2.54□□□□□ -2
EFG1YGR271C-A GCN3P14741 305 aa2.54□□□□□ -2
EFG1YGR271C-A DBF2P22204 572 aa2.54□□□□□ -2
EFG1YGR271C-A ATG15P25641 520 aa2.54□□□□□ -2
EFG1YGR271C-A CAM1P29547 415 aaKnown RBP2.54□□□□□ -2
EFG1YGR271C-A SRY1P36007 326 aa2.54□□□□□ -2
EFG1YGR271C-A ECM33P38248 429 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms