RNA–Protein interactions for RNA: YGR215W

RSM27, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM27, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM27	YGR215W	LSM4	P40070	187 aa	Known RBP	1.82	□□□□□ -2.12
RSM27	YGR215W	YPR147C	Q06522	304 aa	Known RBP	1.82	□□□□□ -2.12
RSM27	YGR215W	COX2	P00410	251 aa		1.81	□□□□□ -2.12
RSM27	YGR215W	RPL24A	P04449	155 aa	Known RBP	1.81	□□□□□ -2.12
RSM27	YGR215W	ADH3	P07246	375 aa	Known RBP	1.81	□□□□□ -2.12
RSM27	YGR215W	RPL10	P41805	221 aa	Known RBP	1.81	□□□□□ -2.12
RSM27	YGR215W	ALG11	P53954	548 aa	Known RBP	1.81	□□□□□ -2.12
RSM27	YGR215W	VPS3	P23643	1011 aa		1.8	□□□□□ -2.12
RSM27	YGR215W	JEN1	P36035	616 aa		1.8	□□□□□ -2.12
RSM27	YGR215W	PRS2	P38620	318 aa	Known RBP	1.8	□□□□□ -2.12
RSM27	YGR215W	SNZ3	P43545	298 aa		1.8	□□□□□ -2.12
RSM27	YGR215W	EMP46	Q12396	444 aa		1.8	□□□□□ -2.12
RSM27	YGR215W	OM45	P16547	393 aa		1.79	□□□□□ -2.12
RSM27	YGR215W	YDR209C	Q03480	137 aa		1.79	□□□□□ -2.12
RSM27	YGR215W	GOT1	Q03554	138 aa		1.79	□□□□□ -2.12
RSM27	YGR215W	YDR124W	Q04608	324 aa		1.79	□□□□□ -2.12
RSM27	YGR215W	ADH6	Q04894	360 aa	Known RBP	1.79	□□□□□ -2.12
RSM27	YGR215W	CCA1	P21269	546 aa		1.78	□□□□□ -2.12
RSM27	YGR215W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	1.78	□□□□□ -2.12	not detected
RSM27	YGR215W	MSA2	P36157	363 aa		1.78	□□□□□ -2.12
RSM27	YGR215W	SMB1	P40018	196 aa	Known RBP	1.78	□□□□□ -2.12
RSM27	YGR215W	SMD3	P43321	101 aa	Known RBP	1.78	□□□□□ -2.12
RSM27	YGR215W	CTF19	Q02732	369 aa		1.78	□□□□□ -2.12
RSM27	YGR215W	ATG17	Q06410	417 aa		1.78	□□□□□ -2.12
RSM27	YGR215W	YKR104W	P0CE69	306 aa		1.77	□□□□□ -2.13
RSM27	YGR215W	POL30	P15873	258 aa	Known RBP	1.77	□□□□□ -2.13
RSM27	YGR215W	DAL82	P21705	255 aa		1.77	□□□□□ -2.13
RSM27	YGR215W	EBP2	P36049	427 aa	Known RBP	1.77	□□□□□ -2.13
RSM27	YGR215W	COS8	P38723	381 aa		1.77	□□□□□ -2.13
RSM27	YGR215W	ARC15	P40518	154 aa	RIP-Chip data	1.77	□□□□□ -2.13	not detected
RSM27	YGR215W	MPP6	P53725	186 aa	Predicted RBP	1.77	□□□□□ -2.13
RSM27	YGR215W	ASI3	P53983	676 aa		1.77	□□□□□ -2.13
RSM27	YGR215W	RAS2	P01120	322 aa	Known RBP	1.76	□□□□□ -2.13
RSM27	YGR215W	EHD3	P28817	500 aa		1.76	□□□□□ -2.13
RSM27	YGR215W	YHR125W	P38831	101 aa		1.76	□□□□□ -2.13
RSM27	YGR215W	YHB1	P39676	399 aa	Known RBP	1.76	□□□□□ -2.13
RSM27	YGR215W	RTT105	P40063	208 aa		1.76	□□□□□ -2.13
RSM27	YGR215W	MEP1	P40260	492 aa		1.76	□□□□□ -2.13
RSM27	YGR215W	MRH4	P53166	561 aa		1.76	□□□□□ -2.13
RSM27	YGR215W	PRM15	Q03262	622 aa		1.76	□□□□□ -2.13
RSM27	YGR215W	YPR098C	Q06089	161 aa		1.76	□□□□□ -2.13
RSM27	YGR215W	COQ10	Q08058	207 aa		1.76	□□□□□ -2.13
RSM27	YGR215W	RRP40	Q08285	240 aa	Known RBP	1.76	□□□□□ -2.13
RSM27	YGR215W	SNF8	Q12483	233 aa		1.76	□□□□□ -2.13
RSM27	YGR215W	Q0255	P03881	472 aa		1.75	□□□□□ -2.13
RSM27	YGR215W	SGE1	P33335	543 aa		1.75	□□□□□ -2.13
RSM27	YGR215W	YER189W	P40104	122 aa		1.75	□□□□□ -2.13
RSM27	YGR215W	YAR1	P46683	200 aa		1.75	□□□□□ -2.13
RSM27	YGR215W	YGL159W	P53110	370 aa		1.75	□□□□□ -2.13
RSM27	YGR215W	SNZ2	P53824	298 aa		1.75	□□□□□ -2.13
RSM27	YGR215W	SYC1	Q08553	188 aa	Predicted RBP	1.75	□□□□□ -2.13
RSM27	YGR215W	BTS1	Q12051	335 aa		1.75	□□□□□ -2.13
RSM27	YGR215W	ATO3	Q12359	275 aa		1.75	□□□□□ -2.13
RSM27	YGR215W	BOL1	Q3E793	110 aa		1.75	□□□□□ -2.13
RSM27	YGR215W	YLR462W	O13556	202 aa		1.74	□□□□□ -2.13
RSM27	YGR215W	MRPL39	P36533	70 aa		1.74	□□□□□ -2.13
RSM27	YGR215W	YBR096W	P38256	230 aa		1.74	□□□□□ -2.13
RSM27	YGR215W	BIG1	P38813	335 aa		1.74	□□□□□ -2.13
RSM27	YGR215W	YEL075C	P39972	122 aa		1.74	□□□□□ -2.13
RSM27	YGR215W	SPG4	Q04438	115 aa		1.74	□□□□□ -2.13
RSM27	YGR215W	YLR030W	Q07967	263 aa		1.74	□□□□□ -2.13
RSM27	YGR215W	ERG24	P32462	438 aa	Known RBP	1.73	□□□□□ -2.13
RSM27	YGR215W	RIB7	P33312	244 aa		1.73	□□□□□ -2.13
RSM27	YGR215W	GOS1	P38736	223 aa		1.73	□□□□□ -2.13
RSM27	YGR215W	AYR1	P40471	297 aa		1.73	□□□□□ -2.13
RSM27	YGR215W	GLG2	P47011	380 aa		1.73	□□□□□ -2.13
RSM27	YGR215W	AKR2	Q12013	749 aa		1.73	□□□□□ -2.13
RSM27	YGR215W	YOL107W	Q12239	342 aa		1.73	□□□□□ -2.13
RSM27	YGR215W	HOM6	P31116	359 aa	Known RBP	1.72	□□□□□ -2.13
RSM27	YGR215W	VMA11	P32842	164 aa		1.72	□□□□□ -2.13
RSM27	YGR215W	CTR2	P38865	189 aa		1.72	□□□□□ -2.13
RSM27	YGR215W	PET100	P38958	111 aa		1.72	□□□□□ -2.13
RSM27	YGR215W	GPI8	P49018	411 aa		1.72	□□□□□ -2.13
RSM27	YGR215W	USE1	P53146	245 aa		1.72	□□□□□ -2.13
RSM27	YGR215W	RHO3	Q00245	231 aa	Known RBP	1.72	□□□□□ -2.13
RSM27	YGR215W	RRS1	Q08746	203 aa	Known RBP	1.72	□□□□□ -2.13
RSM27	YGR215W	COX5A	P00424	153 aa		1.71	□□□□□ -2.14
RSM27	YGR215W	PEX4	P29340	183 aa		1.71	□□□□□ -2.14
RSM27	YGR215W	YGR026W	P53217	278 aa		1.71	□□□□□ -2.14
RSM27	YGR215W	DAD3	P69850	94 aa		1.71	□□□□□ -2.14
RSM27	YGR215W	MRPS8	Q03799	155 aa		1.71	□□□□□ -2.14
RSM27	YGR215W	SDO1	Q07953	250 aa	Known RBP	1.71	□□□□□ -2.14
RSM27	YGR215W	YOR186W	Q08560	144 aa		1.71	□□□□□ -2.14
RSM27	YGR215W	DSF1	P0CX08	502 aa		1.7	□□□□□ -2.14
RSM27	YGR215W	YNR073C	P0CX09	502 aa		1.7	□□□□□ -2.14
RSM27	YGR215W	FBA1	P14540	359 aa	Known RBP	1.7	□□□□□ -2.14
RSM27	YGR215W	SCL1	P21243	252 aa	Known RBP	1.7	□□□□□ -2.14
RSM27	YGR215W	RNA15	P25299	296 aa	Predicted RBP	1.7	□□□□□ -2.14
RSM27	YGR215W	MRX3	P38172	270 aa		1.7	□□□□□ -2.14
RSM27	YGR215W	FZO1	P38297	855 aa		1.7	□□□□□ -2.14
RSM27	YGR215W	CIS3	P47001	227 aa		1.7	□□□□□ -2.14
RSM27	YGR215W	YMR279C	Q03263	540 aa		1.7	□□□□□ -2.14
RSM27	YGR215W	FAR8	Q05040	523 aa		1.7	□□□□□ -2.14
RSM27	YGR215W	THO1	P40040	218 aa	Known RBP	1.69	□□□□□ -2.14
RSM27	YGR215W	PEP8	P40335	379 aa		1.69	□□□□□ -2.14
RSM27	YGR215W	IPP1	P00817	287 aa	Known RBP	1.68	□□□□□ -2.14
RSM27	YGR215W	MSF1	P08425	469 aa		1.68	□□□□□ -2.14
RSM27	YGR215W	GTR2	P53290	341 aa		1.68	□□□□□ -2.14
RSM27	YGR215W	INM2	Q05533	292 aa		1.68	□□□□□ -2.14
RSM27	YGR215W	YPL257W	Q08974	193 aa		1.68	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms