RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W YLR049CQ12110 428 aa3.09□□□□□ -1.92
CAF130YGR134W YLR046CQ12253 270 aa3.09□□□□□ -1.92
CAF130YGR134W TRM10Q12400 293 aa3.09□□□□□ -1.92
CAF130YGR134W YBL112CQ3E7Y4 105 aa3.09□□□□□ -1.92
CAF130YGR134W YAL064W-BO13512 126 aa3.08□□□□□ -1.92
CAF130YGR134W YCR090CP25654 182 aaKnown RBP3.08□□□□□ -1.92
CAF130YGR134W FUN26P31381 517 aa3.08□□□□□ -1.92
CAF130YGR134W MUD1P32605 298 aaKnown RBP3.08□□□□□ -1.92
CAF130YGR134W SDS24P38314 527 aa3.08□□□□□ -1.92
CAF130YGR134W SLM6P38343 150 aa3.08□□□□□ -1.92
CAF130YGR134W SRP14P38985 146 aa3.08□□□□□ -1.92
CAF130YGR134W POM152P39685 1337 aa3.08□□□□□ -1.92
CAF130YGR134W PRE6P40303 254 aaKnown RBP3.08□□□□□ -1.92
CAF130YGR134W PRM8P53174 237 aa3.08□□□□□ -1.92
CAF130YGR134W YGR042WP53227 271 aa3.08□□□□□ -1.92
CAF130YGR134W SPR6Q01684 191 aa3.08□□□□□ -1.92
CAF130YGR134W YHC1Q05900 231 aaKnown RBP3.08□□□□□ -1.92
CAF130YGR134W YPR127WQ06494 345 aa3.08□□□□□ -1.92
CAF130YGR134W ISY1P21374 235 aaPredicted RBP3.08□□□□□ -1.92
CAF130YGR134W VPS25P47142 202 aa3.08□□□□□ -1.92
CAF130YGR134W YGL235WP53071 178 aa3.08□□□□□ -1.92
CAF130YGR134W YNL234WP53857 426 aa3.08□□□□□ -1.92
CAF130YGR134W ERG13P54839 491 aaKnown RBP3.08□□□□□ -1.92
CAF130YGR134W OSW1Q08692 278 aa3.08□□□□□ -1.92
CAF130YGR134W TIM18Q08749 192 aa3.08□□□□□ -1.92
CAF130YGR134W POM33Q12164 279 aa3.08□□□□□ -1.92
CAF130YGR134W CUP2P15315 225 aa3.08□□□□□ -1.92
CAF130YGR134W SIP2P34164 415 aaKnown RBP3.08□□□□□ -1.92
CAF130YGR134W GEP4P38812 185 aa3.08□□□□□ -1.92
CAF130YGR134W PTI1P39927 425 aaPredicted RBP3.08□□□□□ -1.92
CAF130YGR134W GIM4P40005 111 aaKnown RBP3.08□□□□□ -1.92
CAF130YGR134W YJR030CP47101 745 aa3.08□□□□□ -1.92
CAF130YGR134W SWC4P53201 476 aa3.08□□□□□ -1.92
CAF130YGR134W STP1Q00947 519 aa3.08□□□□□ -1.92
CAF130YGR134W YER190C-BP0CX94 160 aa3.07□□□□□ -1.92
CAF130YGR134W YEL077W-AP0CX95 160 aa3.07□□□□□ -1.92
CAF130YGR134W YGR296C-BP0CX96 160 aa3.07□□□□□ -1.92
CAF130YGR134W YPL283W-BP0CX97 160 aa3.07□□□□□ -1.92
CAF130YGR134W YPR204C-AP0CX98 160 aa3.07□□□□□ -1.92
CAF130YGR134W MRP1P10662 321 aaKnown RBP3.07□□□□□ -1.92
CAF130YGR134W GLN3P18494 730 aa3.07□□□□□ -1.92
CAF130YGR134W DBF2P22204 572 aa3.07□□□□□ -1.92
CAF130YGR134W ILV6P25605 309 aaKnown RBP3.07□□□□□ -1.92
CAF130YGR134W KAR9P32526 644 aa3.07□□□□□ -1.92
CAF130YGR134W GLC7P32598 312 aaKnown RBP3.07□□□□□ -1.92
CAF130YGR134W LHP1P33399 275 aaKnown RBP3.07□□□□□ -1.92
CAF130YGR134W MIX23P38162 196 aa3.07□□□□□ -1.92
CAF130YGR134W ECM33P38248 429 aaKnown RBP3.07□□□□□ -1.92
CAF130YGR134W SHE3P38272 425 aaKnown RBP3.07□□□□□ -1.92
CAF130YGR134W SUL1P38359 859 aa3.07□□□□□ -1.92
CAF130YGR134W DOG1P38774 246 aa3.07□□□□□ -1.92
CAF130YGR134W PCL5P38794 229 aa3.07□□□□□ -1.92
CAF130YGR134W SEO1P39709 593 aa3.07□□□□□ -1.92
CAF130YGR134W APS3P47064 194 aa3.07□□□□□ -1.92
CAF130YGR134W AVT4P50944 713 aa3.07□□□□□ -1.92
CAF130YGR134W ORM2Q06144 216 aa3.07□□□□□ -1.92
CAF130YGR134W DDC1Q08949 612 aa3.07□□□□□ -1.92
CAF130YGR134W YLR050CQ12155 161 aaKnown RBP3.07□□□□□ -1.92
CAF130YGR134W ERP3Q12403 225 aa3.07□□□□□ -1.92
CAF130YGR134W CYC3P06182 269 aa3.07□□□□□ -1.92
CAF130YGR134W RPL16BP26785 198 aaKnown RBP3.07□□□□□ -1.92
CAF130YGR134W TCA17P32613 152 aa3.07□□□□□ -1.92
CAF130YGR134W KRE29P40026 464 aa3.07□□□□□ -1.92
CAF130YGR134W COX15P40086 486 aa3.07□□□□□ -1.92
CAF130YGR134W PEX17P40155 199 aa3.07□□□□□ -1.92
CAF130YGR134W TIM8P57744 87 aa3.07□□□□□ -1.92
CAF130YGR134W CTL1Q03220 320 aaKnown RBP3.07□□□□□ -1.92
CAF130YGR134W YOL019WQ08157 551 aa3.07□□□□□ -1.92
CAF130YGR134W HKR1P41809 1802 aa3.07□□□□□ -1.92
CAF130YGR134W ILV1P00927 576 aaKnown RBP3.06□□□□□ -1.92
CAF130YGR134W ADK1P07170 222 aaKnown RBP3.06□□□□□ -1.92
CAF130YGR134W PHO13P19881 312 aa3.06□□□□□ -1.92
CAF130YGR134W SSH1P38353 490 aaKnown RBP3.06□□□□□ -1.92
CAF130YGR134W YHL049CP38722 271 aa3.06□□□□□ -1.92
CAF130YGR134W YPD1Q07688 167 aa3.06□□□□□ -1.92
CAF130YGR134W RFU1Q08003 200 aa3.06□□□□□ -1.92
CAF130YGR134W PET54P10834 293 aa3.06□□□□□ -1.92
CAF130YGR134W ATS1P31386 333 aa3.06□□□□□ -1.92
CAF130YGR134W UGX2P32772 223 aa3.06□□□□□ -1.92
CAF130YGR134W COX13P32799 129 aa3.06□□□□□ -1.92
CAF130YGR134W ECM14P38836 430 aa3.06□□□□□ -1.92
CAF130YGR134W RTS2P40962 232 aa3.06□□□□□ -1.92
CAF130YGR134W YJR012CP47087 207 aa3.06□□□□□ -1.92
CAF130YGR134W COS6P53344 381 aa3.06□□□□□ -1.92
CAF130YGR134W ABF2Q02486 183 aa3.06□□□□□ -1.92
CAF130YGR134W BSP1Q06604 576 aa3.06□□□□□ -1.92
CAF130YGR134W THI72Q08579 599 aa3.06□□□□□ -1.92
CAF130YGR134W MEX67Q99257 599 aaKnown RBP3.06□□□□□ -1.92
CAF130YGR134W RPL20AP0CX23 172 aaKnown RBP3.06□□□□□ -1.92
CAF130YGR134W RPL20BP0CX24 172 aaPredicted RBP3.06□□□□□ -1.92
CAF130YGR134W VPH2P32341 215 aa3.06□□□□□ -1.92
CAF130YGR134W KTI12P34253 313 aaKnown RBP3.06□□□□□ -1.92
CAF130YGR134W GTR2P53290 341 aa3.06□□□□□ -1.92
CAF130YGR134W RPL15BP54780 204 aaPredicted RBP3.06□□□□□ -1.92
CAF130YGR134W TDA1Q03533 586 aa3.06□□□□□ -1.92
CAF130YGR134W GRX8Q05926 109 aa3.06□□□□□ -1.92
CAF130YGR134W DAP1Q12091 152 aa3.06□□□□□ -1.92
CAF130YGR134W YLR126CQ12288 251 aa3.06□□□□□ -1.92
CAF130YGR134W BI3Q9ZZW7 517 aa3.06□□□□□ -1.92
CAF130YGR134W YFL068WP0CX99 160 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms