RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C ADH6Q04894 360 aaKnown RBP1.26□□□□□ -2.21
SMB1YER029C KAP95Q06142 861 aaKnown RBP1.26□□□□□ -2.21
SMB1YER029C YLR179CQ06252 201 aaKnown RBP1.26□□□□□ -2.21
SMB1YER029C YOL107WQ12239 342 aa1.26□□□□□ -2.21
SMB1YER029C PST1Q12355 444 aa1.26□□□□□ -2.21
SMB1YER029C SAS5Q99314 248 aa1.26□□□□□ -2.21
SMB1YER029C RAS2P01120 322 aaKnown RBP1.25□□□□□ -2.21
SMB1YER029C CCA1P21269 546 aa1.25□□□□□ -2.21
SMB1YER029C EHD3P28817 500 aa1.25□□□□□ -2.21
SMB1YER029C PRS4P38063 326 aaPredicted RBP1.25□□□□□ -2.21
SMB1YER029C BIG1P38813 335 aa1.25□□□□□ -2.21
SMB1YER029C RPL10P41805 221 aaKnown RBP1.25□□□□□ -2.21
SMB1YER029C YAR1P46683 200 aa1.25□□□□□ -2.21
SMB1YER029C SNX4P47057 423 aa1.25□□□□□ -2.21
SMB1YER029C YDR209CQ03480 137 aa1.25□□□□□ -2.21
SMB1YER029C RRT8Q08219 342 aa1.25□□□□□ -2.21
SMB1YER029C SLD7Q08457 257 aa1.25□□□□□ -2.21
SMB1YER029C BTS1Q12051 335 aa1.25□□□□□ -2.21
SMB1YER029C YBL008W-AQ3E821 79 aa1.25□□□□□ -2.21
SMB1YER029C SWI1P09547 1314 aa1.24□□□□□ -2.21
SMB1YER029C DAL82P21705 255 aa1.24□□□□□ -2.21
SMB1YER029C SEC22P22214 214 aa1.24□□□□□ -2.21
SMB1YER029C CWP1P28319 239 aa1.24□□□□□ -2.21
SMB1YER029C RPT5P33297 434 aaKnown RBP1.24□□□□□ -2.21
SMB1YER029C JEN1P36035 616 aa1.24□□□□□ -2.21
SMB1YER029C PET100P38958 111 aa1.24□□□□□ -2.21
SMB1YER029C SMB1P40018 196 aaKnown RBP1.24□□□□□ -2.21
SMB1YER029C AYR1P40471 297 aa1.24□□□□□ -2.21
SMB1YER029C YFR054CP43622 192 aa1.24□□□□□ -2.21
SMB1YER029C OST2P46964 130 aa1.24□□□□□ -2.21
SMB1YER029C DAD3P69850 94 aa1.24□□□□□ -2.21
SMB1YER029C CTF19Q02732 369 aa1.24□□□□□ -2.21
SMB1YER029C MSF1P08425 469 aa1.23□□□□□ -2.21
SMB1YER029C PUT1P09368 476 aa1.23□□□□□ -2.21
SMB1YER029C RSR1P13856 272 aa1.23□□□□□ -2.21
SMB1YER029C VPS3P23643 1011 aa1.23□□□□□ -2.21
SMB1YER029C YUH1P35127 236 aa1.23□□□□□ -2.21
SMB1YER029C DOG1P38774 246 aa1.23□□□□□ -2.21
SMB1YER029C CTR2P38865 189 aa1.23□□□□□ -2.21
SMB1YER029C LSM4P40070 187 aaKnown RBP1.23□□□□□ -2.21
SMB1YER029C ASI3P53983 676 aa1.23□□□□□ -2.21
SMB1YER029C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
SMB1YER029C YPR147CQ06522 304 aaKnown RBP1.23□□□□□ -2.21
SMB1YER029C YOR029WQ12243 111 aa1.23□□□□□ -2.21
SMB1YER029C CYR1P08678 2026 aaKnown RBP1.22□□□□□ -2.21
SMB1YER029C YKR104WP0CE69 306 aa1.22□□□□□ -2.21
SMB1YER029C YBR096WP38256 230 aa1.22□□□□□ -2.21
SMB1YER029C SSH1P38353 490 aaKnown RBP1.22□□□□□ -2.21
SMB1YER029C SNZ3P43545 298 aa1.22□□□□□ -2.21
SMB1YER029C GLG2P47011 380 aa1.22□□□□□ -2.21
SMB1YER029C YNL134CP53912 376 aaKnown RBP1.22□□□□□ -2.21
SMB1YER029C ATG17Q06410 417 aa1.22□□□□□ -2.21
SMB1YER029C SDO1Q07953 250 aaKnown RBP1.22□□□□□ -2.21
SMB1YER029C COQ10Q08058 207 aa1.22□□□□□ -2.21
SMB1YER029C BBP1Q12365 385 aa1.22□□□□□ -2.21
SMB1YER029C SNF8Q12483 233 aa1.22□□□□□ -2.21
SMB1YER029C TCP1P12612 559 aaKnown RBP1.21□□□□□ -2.22
SMB1YER029C HOM6P31116 359 aaKnown RBP1.21□□□□□ -2.22
SMB1YER029C SGE1P33335 543 aa1.21□□□□□ -2.22
SMB1YER029C MRX3P38172 270 aa1.21□□□□□ -2.22
SMB1YER029C GOS1P38736 223 aa1.21□□□□□ -2.22
SMB1YER029C BNA6P43619 295 aa1.21□□□□□ -2.22
SMB1YER029C USE1P53146 245 aa1.21□□□□□ -2.22
SMB1YER029C GOT1Q03554 138 aa1.21□□□□□ -2.22
SMB1YER029C YPR098CQ06089 161 aa1.21□□□□□ -2.22
SMB1YER029C RRP40Q08285 240 aaKnown RBP1.21□□□□□ -2.22
SMB1YER029C MSH5Q12175 901 aa1.21□□□□□ -2.22
SMB1YER029C BOL1Q3E793 110 aa1.21□□□□□ -2.22
SMB1YER029C COX5AP00424 153 aa1.2□□□□□ -2.22
SMB1YER029C Q0255P03881 472 aa1.2□□□□□ -2.22
SMB1YER029C YHR032W-AP0C5N6 59 aa1.2□□□□□ -2.22
SMB1YER029C RNA15P25299 296 aaPredicted RBP1.2□□□□□ -2.22
SMB1YER029C RCN1P36054 211 aa1.2□□□□□ -2.22
SMB1YER029C MSA2P36157 363 aa1.2□□□□□ -2.22
SMB1YER029C MRH4P53166 561 aa1.2□□□□□ -2.22
SMB1YER029C SNZ2P53824 298 aa1.2□□□□□ -2.22
SMB1YER029C RHO3Q00245 231 aaKnown RBP1.2□□□□□ -2.22
SMB1YER029C SPG4Q04438 115 aa1.2□□□□□ -2.22
SMB1YER029C YDR124WQ04608 324 aa1.2□□□□□ -2.22
SMB1YER029C SCL1P21243 252 aaKnown RBP1.19□□□□□ -2.22
SMB1YER029C MRPL39P36533 70 aa1.19□□□□□ -2.22
SMB1YER029C COS8P38723 381 aa1.19□□□□□ -2.22
SMB1YER029C YHB1P39676 399 aaKnown RBP1.19□□□□□ -2.22
SMB1YER029C YER135CP40082 130 aa1.19□□□□□ -2.22
SMB1YER029C ARC15P40518 154 aaRIP-Chip data1.19□□□□□ -2.22not detected
SMB1YER029C JHD2P47156 728 aaPredicted RBP1.19□□□□□ -2.22
SMB1YER029C YLR173WQ06247 608 aa1.19□□□□□ -2.22
SMB1YER029C SYC1Q08553 188 aaPredicted RBP1.19□□□□□ -2.22
SMB1YER029C RRS1Q08746 203 aaKnown RBP1.19□□□□□ -2.22
SMB1YER029C YCT1Q12235 531 aa1.19□□□□□ -2.22
SMB1YER029C MHT1Q12525 324 aa1.19□□□□□ -2.22
SMB1YER029C CDC7P06243 507 aa1.18□□□□□ -2.22
SMB1YER029C PEX4P29340 183 aa1.18□□□□□ -2.22
SMB1YER029C FZO1P38297 855 aa1.18□□□□□ -2.22
SMB1YER029C YHR125WP38831 101 aa1.18□□□□□ -2.22
SMB1YER029C BFR1P38934 470 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
SMB1YER029C THO1P40040 218 aaKnown RBP1.18□□□□□ -2.22
SMB1YER029C YJR079WP47126 109 aa1.18□□□□□ -2.22
SMB1YER029C YLR030WQ07967 263 aa1.18□□□□□ -2.22
SMB1YER029C CSM4Q08955 156 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms