RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C YGL185CP53100 379 aa-1.3□□□□□ -2.62
SPG3YDR504C YNL050CP53952 270 aa-1.3□□□□□ -2.62
SPG3YDR504C DIG2Q03373 323 aaKnown RBP-1.3□□□□□ -2.62
SPG3YDR504C RRS1Q08746 203 aaKnown RBP-1.3□□□□□ -2.62
SPG3YDR504C NBL1Q3E7Y6 73 aa-1.3□□□□□ -2.62
SPG3YDR504C GRX2P17695 143 aaKnown RBP-1.31□□□□□ -2.62
SPG3YDR504C RPL33BP41056 107 aaKnown RBP-1.31□□□□□ -2.62
SPG3YDR504C BOL2P53082 120 aa-1.31□□□□□ -2.62
SPG3YDR504C YPL077CQ02831 240 aa-1.31□□□□□ -2.62
SPG3YDR504C YDL180WQ12301 547 aa-1.31□□□□□ -2.62
SPG3YDR504C RPL4AP10664 362 aaKnown RBP-1.32□□□□□ -2.62
SPG3YDR504C PEX3P28795 441 aa-1.32□□□□□ -2.62
SPG3YDR504C SWD2P36104 329 aaPredicted RBP-1.32□□□□□ -2.62
SPG3YDR504C YHL049CP38722 271 aa-1.32□□□□□ -2.62
SPG3YDR504C GAA1P39012 614 aa-1.32□□□□□ -2.62
SPG3YDR504C EDC3P39998 551 aaKnown RBP-1.32□□□□□ -2.62
SPG3YDR504C SER33P40510 469 aa-1.32□□□□□ -2.62
SPG3YDR504C YAE1P47118 141 aaPredicted RBP-1.32□□□□□ -2.62
SPG3YDR504C RPL4BP49626 362 aaKnown RBP-1.32□□□□□ -2.62
SPG3YDR504C SXM1Q04175 944 aaKnown RBP-1.32□□□□□ -2.62
SPG3YDR504C YMR111CQ04461 462 aaPredicted RBP-1.32□□□□□ -2.62
SPG3YDR504C HEM25Q07534 307 aa-1.32□□□□□ -2.62
SPG3YDR504C VMA8P32610 256 aaKnown RBP-1.33□□□□□ -2.62
SPG3YDR504C CUS2P53830 285 aaPredicted RBP-1.33□□□□□ -2.62
SPG3YDR504C YLR179CQ06252 201 aaKnown RBP-1.33□□□□□ -2.62
SPG3YDR504C DAD2P36162 133 aa-1.34□□□□□ -2.62
SPG3YDR504C YNL217WP40152 326 aa-1.34□□□□□ -2.62
SPG3YDR504C SEC28P40509 296 aaKnown RBP-1.34□□□□□ -2.62
SPG3YDR504C CUE3P53137 624 aaKnown RBP-1.34□□□□□ -2.62
SPG3YDR504C SEC10Q06245 871 aa-1.34□□□□□ -2.62
SPG3YDR504C ASR1Q06834 288 aa-1.34□□□□□ -2.62
SPG3YDR504C YLR462WO13556 202 aa-1.35□□□□□ -2.63
SPG3YDR504C YHL042WP38729 150 aa-1.35□□□□□ -2.63
SPG3YDR504C YEL075CP39972 122 aa-1.35□□□□□ -2.63
SPG3YDR504C YIA6P40556 373 aa-1.35□□□□□ -2.63
SPG3YDR504C RNR2P09938 399 aaKnown RBP-1.36□□□□□ -2.63
SPG3YDR504C FLX1P40464 311 aa-1.36□□□□□ -2.63
SPG3YDR504C YNL247WP53852 767 aaKnown RBP-1.36□□□□□ -2.63
SPG3YDR504C TPO4Q12256 659 aa-1.36□□□□□ -2.63
SPG3YDR504C GTO1P48239 356 aa-1.37□□□□□ -2.63
SPG3YDR504C ARO8P53090 500 aaKnown RBP-1.37□□□□□ -2.63
SPG3YDR504C RCE1Q03530 315 aa-1.37□□□□□ -2.63
SPG3YDR504C VBA1Q04301 562 aa-1.37□□□□□ -2.63
SPG3YDR504C POM33Q12164 279 aa-1.37□□□□□ -2.63
SPG3YDR504C YOS9Q99220 542 aa-1.37□□□□□ -2.63
SPG3YDR504C ATP6P00854 259 aa-1.38□□□□□ -2.63
SPG3YDR504C MEI4P29467 408 aa-1.38□□□□□ -2.63
SPG3YDR504C MSA2P36157 363 aa-1.38□□□□□ -2.63
SPG3YDR504C SIP3P38717 1229 aa-1.38□□□□□ -2.63
SPG3YDR504C RRF1P38771 230 aa-1.38□□□□□ -2.63
SPG3YDR504C PEX17P40155 199 aa-1.38□□□□□ -2.63
SPG3YDR504C COX16P47081 118 aa-1.38□□□□□ -2.63
SPG3YDR504C SAY1P53324 424 aa-1.38□□□□□ -2.63
SPG3YDR504C DBP9Q06218 594 aaKnown RBP-1.38□□□□□ -2.63
SPG3YDR504C YBL008W-AQ3E821 79 aa-1.38□□□□□ -2.63
SPG3YDR504C SSA3P09435 649 aaKnown RBP-1.39□□□□□ -2.63
SPG3YDR504C RPL27BP0C2H7 136 aaKnown RBP-1.39□□□□□ -2.63
SPG3YDR504C HEK2P38199 381 aaKnown RBP RIP-Chip data-1.39□□□□□ -2.63 RIP-Chip
SPG3YDR504C LRP1P38801 184 aaKnown RBP-1.39□□□□□ -2.63
SPG3YDR504C LIN1P38852 340 aaPredicted RBP-1.39□□□□□ -2.63
SPG3YDR504C YER189WP40104 122 aa-1.39□□□□□ -2.63
SPG3YDR504C PGD1P40356 397 aa-1.39□□□□□ -2.63
SPG3YDR504C AIF1P52923 378 aa-1.39□□□□□ -2.63
SPG3YDR504C YGL034CP53186 121 aa-1.39□□□□□ -2.63
SPG3YDR504C FAR8Q05040 523 aa-1.39□□□□□ -2.63
SPG3YDR504C SKS1Q12505 502 aa-1.39□□□□□ -2.63
SPG3YDR504C GAL3P13045 520 aa-1.4□□□□□ -2.63
SPG3YDR504C VPS45P38932 577 aa-1.4□□□□□ -2.63
SPG3YDR504C NBP35P52920 328 aa-1.4□□□□□ -2.63
SPG3YDR504C CWC27Q02770 301 aa-1.4□□□□□ -2.63
SPG3YDR504C MET5P47169 1442 aa-1.4□□□□□ -2.63
SPG3YDR504C PRX1P34227 261 aaKnown RBP-1.41□□□□□ -2.64
SPG3YDR504C APE4P38821 490 aa-1.41□□□□□ -2.64
SPG3YDR504C PRM3Q08931 133 aa-1.41□□□□□ -2.64
SPG3YDR504C MSH5Q12175 901 aa-1.41□□□□□ -2.64
SPG3YDR504C TAL1P15019 335 aaKnown RBP-1.42□□□□□ -2.64
SPG3YDR504C SWC5P38326 303 aa-1.42□□□□□ -2.64
SPG3YDR504C ERJ5P43613 295 aaPredicted RBP-1.42□□□□□ -2.64
SPG3YDR504C POP3P53833 195 aaPredicted RBP-1.42□□□□□ -2.64
SPG3YDR504C PAA1Q12447 191 aaKnown RBP-1.42□□□□□ -2.64
SPG3YDR504C TFC1P32367 649 aa-1.43□□□□□ -2.64
SPG3YDR504C YRB2P40517 327 aa-1.43□□□□□ -2.64
SPG3YDR504C GPI8P49018 411 aa-1.43□□□□□ -2.64
SPG3YDR504C SWS2P53937 143 aa-1.43□□□□□ -2.64
SPG3YDR504C SIA1Q12212 622 aa-1.43□□□□□ -2.64
SPG3YDR504C SWI1P09547 1314 aa-1.43□□□□□ -2.64
SPG3YDR504C ICL1P28240 557 aaPredicted RBP-1.44□□□□□ -2.64
SPG3YDR504C GTR2P53290 341 aa-1.44□□□□□ -2.64
SPG3YDR504C FRE6Q12473 712 aa-1.44□□□□□ -2.64
SPG3YDR504C SNA3P14359 133 aa-1.45□□□□□ -2.64
SPG3YDR504C ERG24P32462 438 aaKnown RBP-1.45□□□□□ -2.64
SPG3YDR504C FIS1P40515 155 aa-1.45□□□□□ -2.64
SPG3YDR504C RPL5P26321 297 aaKnown RBP-1.46□□□□□ -2.64
SPG3YDR504C FZO1P38297 855 aa-1.46□□□□□ -2.64
SPG3YDR504C YGL159WP53110 370 aa-1.46□□□□□ -2.64
SPG3YDR504C MNT4P53745 580 aa-1.46□□□□□ -2.64
SPG3YDR504C EOS1P53938 366 aa-1.46□□□□□ -2.64
SPG3YDR504C ATG39Q06159 398 aa-1.46□□□□□ -2.64
SPG3YDR504C SFH1Q06168 426 aa-1.46□□□□□ -2.64
SPG3YDR504C YCT1Q12235 531 aa-1.46□□□□□ -2.64
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms