RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W TAF9Q05027 157 aa1.9□□□□□ -2.11
SSF2YDR312W ARC18Q05933 178 aaKnown RBP1.9□□□□□ -2.11
SSF2YDR312W GMC2Q06201 188 aa1.9□□□□□ -2.11
SSF2YDR312W ASR1Q06834 288 aa1.9□□□□□ -2.11
SSF2YDR312W ATG10Q07879 167 aa1.9□□□□□ -2.11
SSF2YDR312W YOR292CQ08743 309 aa1.9□□□□□ -2.11
SSF2YDR312W MRPL23Q12487 163 aaPredicted RBP1.9□□□□□ -2.11
SSF2YDR312W CUP2P15315 225 aa1.89□□□□□ -2.11
SSF2YDR312W POL30P15873 258 aaKnown RBP1.89□□□□□ -2.11
SSF2YDR312W DAL81P21657 970 aa1.89□□□□□ -2.11
SSF2YDR312W CDC13P32797 924 aaKnown RBP1.89□□□□□ -2.11
SSF2YDR312W AST1P35183 429 aa1.89□□□□□ -2.11
SSF2YDR312W MRPL3P36516 390 aa1.89□□□□□ -2.11
SSF2YDR312W YHL044WP38727 235 aa1.89□□□□□ -2.11
SSF2YDR312W EDC2P40023 145 aaPredicted RBP1.89□□□□□ -2.11
SSF2YDR312W MEP1P40260 492 aa1.89□□□□□ -2.11
SSF2YDR312W GDS1P41913 522 aa1.89□□□□□ -2.11
SSF2YDR312W NBP35P52920 328 aa1.89□□□□□ -2.11
SSF2YDR312W EMC4P53073 190 aa1.89□□□□□ -2.11
SSF2YDR312W YGL118CP53132 145 aa1.89□□□□□ -2.11
SSF2YDR312W SMD1Q02260 146 aaPredicted RBP1.89□□□□□ -2.11
SSF2YDR312W YMR209CQ03648 457 aa1.89□□□□□ -2.11
SSF2YDR312W YML018CQ03730 393 aa1.89□□□□□ -2.11
SSF2YDR312W YMR111CQ04461 462 aaPredicted RBP1.89□□□□□ -2.11
SSF2YDR312W FMP16Q12497 93 aa1.89□□□□□ -2.11
SSF2YDR312W OPY1P38271 328 aa1.88□□□□□ -2.11
SSF2YDR312W MED8P38304 223 aa1.88□□□□□ -2.11
SSF2YDR312W PET8P38921 284 aa1.88□□□□□ -2.11
SSF2YDR312W NPT1P39683 429 aaKnown RBP1.88□□□□□ -2.11
SSF2YDR312W KRE29P40026 464 aa1.88□□□□□ -2.11
SSF2YDR312W COS4P43542 379 aa1.88□□□□□ -2.11
SSF2YDR312W PRP24P49960 444 aaKnown RBP1.88□□□□□ -2.11
SSF2YDR312W RSM27P53305 110 aa1.88□□□□□ -2.11
SSF2YDR312W MZM1Q03429 123 aaPredicted RBP1.88□□□□□ -2.11
SSF2YDR312W SPG3Q04398 127 aaPredicted RBP1.88□□□□□ -2.11
SSF2YDR312W NKP2Q06162 153 aa1.88□□□□□ -2.11
SSF2YDR312W PEX30Q06169 523 aa1.88□□□□□ -2.11
SSF2YDR312W ABP140Q08641 628 aaKnown RBP1.88□□□□□ -2.11
SSF2YDR312W PRP46Q12417 451 aaPredicted RBP1.88□□□□□ -2.11
SSF2YDR312W CPT1P17898 393 aa1.87□□□□□ -2.11
SSF2YDR312W RRT12P25381 491 aa1.87□□□□□ -2.11
SSF2YDR312W PEX3P28795 441 aa1.87□□□□□ -2.11
SSF2YDR312W TAF14P35189 244 aa1.87□□□□□ -2.11
SSF2YDR312W YPC1P38298 316 aa1.87□□□□□ -2.11
SSF2YDR312W RCY1P39531 840 aa1.87□□□□□ -2.11
SSF2YDR312W PHB1P40961 287 aa1.87□□□□□ -2.11
SSF2YDR312W BUD13P46947 266 aaPredicted RBP1.87□□□□□ -2.11
SSF2YDR312W IBA57P47158 497 aa1.87□□□□□ -2.11
SSF2YDR312W YGL185CP53100 379 aa1.87□□□□□ -2.11
SSF2YDR312W CAX4P53223 239 aa1.87□□□□□ -2.11
SSF2YDR312W ACT1P60010 375 aaKnown RBP1.87□□□□□ -2.11
SSF2YDR312W SPP2Q02521 185 aa1.87□□□□□ -2.11
SSF2YDR312W YLR046CQ12253 270 aa1.87□□□□□ -2.11
SSF2YDR312W RRP36Q12481 300 aaPredicted RBP1.87□□□□□ -2.11
SSF2YDR312W YAL064W-BO13512 126 aa1.86□□□□□ -2.11
SSF2YDR312W YSR3P23501 404 aa1.86□□□□□ -2.11
SSF2YDR312W IME2P32581 645 aa1.86□□□□□ -2.11
SSF2YDR312W ALK2P32789 676 aaPredicted RBP1.86□□□□□ -2.11
SSF2YDR312W PPQ1P32945 549 aa1.86□□□□□ -2.11
SSF2YDR312W RIB7P33312 244 aa1.86□□□□□ -2.11
SSF2YDR312W GPX1P36014 167 aa1.86□□□□□ -2.11
SSF2YDR312W MBA1P38300 278 aa1.86□□□□□ -2.11
SSF2YDR312W AVT6P40074 448 aa1.86□□□□□ -2.11
SSF2YDR312W YIL059CP40520 121 aa1.86□□□□□ -2.11
SSF2YDR312W FMP33P46998 180 aa1.86□□□□□ -2.11
SSF2YDR312W TAD2P47058 250 aa1.86□□□□□ -2.11
SSF2YDR312W YJR079WP47126 109 aa1.86□□□□□ -2.11
SSF2YDR312W CPD1P53314 239 aa1.86□□□□□ -2.11
SSF2YDR312W YNL040WP53960 456 aaPredicted RBP1.86□□□□□ -2.11
SSF2YDR312W PIR1Q03178 341 aa1.86□□□□□ -2.11
SSF2YDR312W ATC1Q04005 294 aa1.86□□□□□ -2.11
SSF2YDR312W DPP1Q05521 289 aa1.86□□□□□ -2.11
SSF2YDR312W GIS3Q12418 502 aa1.86□□□□□ -2.11
SSF2YDR312W DYN1P36022 4092 aa1.86□□□□□ -2.11
SSF2YDR312W YKR104WP0CE69 306 aa1.85□□□□□ -2.11
SSF2YDR312W PHO80P20052 293 aa1.85□□□□□ -2.11
SSF2YDR312W KRE6P32486 720 aa1.85□□□□□ -2.11
SSF2YDR312W SPT4P32914 102 aaPredicted RBP1.85□□□□□ -2.11
SSF2YDR312W URA8P38627 578 aaPredicted RBP1.85□□□□□ -2.11
SSF2YDR312W GLG2P47011 380 aa1.85□□□□□ -2.11
SSF2YDR312W UFD1P53044 361 aa1.85□□□□□ -2.11
SSF2YDR312W TPN1P53099 579 aa1.85□□□□□ -2.11
SSF2YDR312W TIM21P53220 239 aa1.85□□□□□ -2.11
SSF2YDR312W MPP6P53725 186 aaPredicted RBP1.85□□□□□ -2.11
SSF2YDR312W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
SSF2YDR312W KAP95Q06142 861 aaKnown RBP1.85□□□□□ -2.11
SSF2YDR312W SEC10Q06245 871 aa1.85□□□□□ -2.11
SSF2YDR312W YPL264CQ08980 353 aa1.85□□□□□ -2.11
SSF2YDR312W POM33Q12164 279 aa1.85□□□□□ -2.11
SSF2YDR312W BCY1P07278 416 aaKnown RBP1.85□□□□□ -2.11
SSF2YDR312W YOL163WP0CF20 169 aa1.85□□□□□ -2.11
SSF2YDR312W RPS23AP0CX29 145 aaKnown RBP1.85□□□□□ -2.11
SSF2YDR312W RPS23BP0CX30 145 aa1.85□□□□□ -2.11
SSF2YDR312W MET16P18408 261 aaPredicted RBP1.85□□□□□ -2.11
SSF2YDR312W CDC42P19073 191 aa1.85□□□□□ -2.11
SSF2YDR312W IMP1P28627 190 aa1.85□□□□□ -2.11
SSF2YDR312W CAM1P29547 415 aaKnown RBP1.85□□□□□ -2.11
SSF2YDR312W ARO4P32449 370 aaKnown RBP1.85□□□□□ -2.11
SSF2YDR312W MRPL37P36532 105 aa1.85□□□□□ -2.11
SSF2YDR312W HSM3P38348 480 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms