RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	BBP1	Q12365	385 aa		0.45	□□□□□ -2.34
CSN9	YDR179C	SEC22	P22214	214 aa		0.44	□□□□□ -2.34
CSN9	YDR179C	VMA11	P32842	164 aa		0.44	□□□□□ -2.34
CSN9	YDR179C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.44	□□□□□ -2.34	not detected
CSN9	YDR179C	VPS45	P38932	577 aa		0.44	□□□□□ -2.34
CSN9	YDR179C	NBP35	P52920	328 aa		0.44	□□□□□ -2.34
CSN9	YDR179C	SML1	Q04964	104 aa		0.44	□□□□□ -2.34
CSN9	YDR179C	BCP1	Q06338	283 aa		0.44	□□□□□ -2.34
CSN9	YDR179C	VAC14	Q06708	880 aa		0.44	□□□□□ -2.34
CSN9	YDR179C	YBL008W-A	Q3E821	79 aa		0.44	□□□□□ -2.34
CSN9	YDR179C	YLR462W	O13556	202 aa		0.43	□□□□□ -2.34
CSN9	YDR179C	GCD2	P12754	651 aa	Predicted RBP	0.43	□□□□□ -2.34
CSN9	YDR179C	YEL075C	P39972	122 aa		0.43	□□□□□ -2.34
CSN9	YDR179C	AGE2	P40529	298 aa		0.43	□□□□□ -2.34
CSN9	YDR179C	MAL13	P53338	473 aa		0.43	□□□□□ -2.34
CSN9	YDR179C	SWS2	P53937	143 aa		0.43	□□□□□ -2.34
CSN9	YDR179C	YMR007W	Q03675	126 aa		0.43	□□□□□ -2.34
CSN9	YDR179C	YPR011C	Q12251	326 aa		0.43	□□□□□ -2.34
CSN9	YDR179C	UBR2	Q07963	1872 aa		0.43	□□□□□ -2.34
CSN9	YDR179C	FLO9	P39712	1322 aa		0.42	□□□□□ -2.34
CSN9	YDR179C	RPC40	P07703	335 aa	Known RBP	0.42	□□□□□ -2.34
CSN9	YDR179C	GPI12	P23797	304 aa		0.42	□□□□□ -2.34
CSN9	YDR179C	CSM1	P25651	190 aa		0.42	□□□□□ -2.34
CSN9	YDR179C	EBP2	P36049	427 aa	Known RBP	0.42	□□□□□ -2.34
CSN9	YDR179C	YER189W	P40104	122 aa		0.42	□□□□□ -2.34
CSN9	YDR179C	JHD2	P47156	728 aa	Predicted RBP	0.42	□□□□□ -2.34
CSN9	YDR179C	RPL37B	P51402	88 aa	Known RBP	0.42	□□□□□ -2.34
CSN9	YDR179C	SPP2	Q02521	185 aa		0.42	□□□□□ -2.34
CSN9	YDR179C	VBA1	Q04301	562 aa		0.42	□□□□□ -2.34
CSN9	YDR179C	FAR8	Q05040	523 aa		0.42	□□□□□ -2.34
CSN9	YDR179C	NEJ1	Q06148	342 aa		0.42	□□□□□ -2.34
CSN9	YDR179C	CTR3	Q06686	241 aa		0.42	□□□□□ -2.34
CSN9	YDR179C	COX5A	P00424	153 aa		0.41	□□□□□ -2.34
CSN9	YDR179C	MSW1	P04803	379 aa		0.41	□□□□□ -2.34
CSN9	YDR179C	UGA1	P17649	471 aa		0.41	□□□□□ -2.34
CSN9	YDR179C	FZO1	P38297	855 aa		0.41	□□□□□ -2.34
CSN9	YDR179C	PEX18	P38855	283 aa		0.41	□□□□□ -2.34
CSN9	YDR179C	CTR2	P38865	189 aa		0.41	□□□□□ -2.34
CSN9	YDR179C	HUA1	P40325	198 aa		0.41	□□□□□ -2.34
CSN9	YDR179C	YGL185C	P53100	379 aa		0.41	□□□□□ -2.34
CSN9	YDR179C	YDR124W	Q04608	324 aa		0.41	□□□□□ -2.34
CSN9	YDR179C	YPL162C	Q12042	273 aa		0.41	□□□□□ -2.34
CSN9	YDR179C	STH1	P32597	1359 aa		0.41	□□□□□ -2.34
CSN9	YDR179C	LOC1	P43586	204 aa	Predicted RBP	0.4	□□□□□ -2.35
CSN9	YDR179C	TOS8	P53147	276 aa		0.4	□□□□□ -2.35
CSN9	YDR179C	MPA43	P53583	542 aa	Predicted RBP	0.4	□□□□□ -2.35
CSN9	YDR179C	MNT4	P53745	580 aa		0.4	□□□□□ -2.35
CSN9	YDR179C	AIM36	Q03798	255 aa		0.4	□□□□□ -2.35
CSN9	YDR179C	RRS1	Q08746	203 aa	Known RBP	0.4	□□□□□ -2.35
CSN9	YDR179C	SME1	Q12330	94 aa	Predicted RBP	0.4	□□□□□ -2.35
CSN9	YDR179C	QCR8	P08525	94 aa		0.39	□□□□□ -2.35
CSN9	YDR179C	PET9	P18239	318 aa	Known RBP	0.39	□□□□□ -2.35
CSN9	YDR179C	TMA19	P35691	167 aa	Known RBP	0.39	□□□□□ -2.35
CSN9	YDR179C	ICE2	P40499	491 aa		0.39	□□□□□ -2.35
CSN9	YDR179C	YNL260C	P53846	198 aa		0.39	□□□□□ -2.35
CSN9	YDR179C	UBC7	Q02159	165 aa		0.39	□□□□□ -2.35
CSN9	YDR179C	SPT7	P35177	1332 aa		0.38	□□□□□ -2.35
CSN9	YDR179C	RPP0	P05317	312 aa	Known RBP	0.38	□□□□□ -2.35
CSN9	YDR179C	POF1	P25576	258 aa		0.38	□□□□□ -2.35
CSN9	YDR179C	HSM3	P38348	480 aa		0.38	□□□□□ -2.35
CSN9	YDR179C	RMR1	P53060	241 aa		0.38	□□□□□ -2.35
CSN9	YDR179C	CUR1	Q06469	252 aa		0.38	□□□□□ -2.35
CSN9	YDR179C	ARR2	Q06597	130 aa		0.38	□□□□□ -2.35
CSN9	YDR179C	TPO4	Q12256	659 aa		0.38	□□□□□ -2.35
CSN9	YDR179C	SIR4	P11978	1358 aa		0.37	□□□□□ -2.35
CSN9	YDR179C	FIS1	P40515	155 aa		0.37	□□□□□ -2.35
CSN9	YDR179C	MRX5	P47007	382 aa		0.37	□□□□□ -2.35
CSN9	YDR179C	MRH4	P53166	561 aa		0.37	□□□□□ -2.35
CSN9	YDR179C	MPP6	P53725	186 aa	Predicted RBP	0.37	□□□□□ -2.35
CSN9	YDR179C	SPO19	Q03029	223 aa		0.37	□□□□□ -2.35
CSN9	YDR179C	GOT1	Q03554	138 aa		0.37	□□□□□ -2.35
CSN9	YDR179C	SYC1	Q08553	188 aa	Predicted RBP	0.37	□□□□□ -2.35
CSN9	YDR179C	FRS2	P15625	503 aa	Known RBP	0.36	□□□□□ -2.35
CSN9	YDR179C	GRX2	P17695	143 aa	Known RBP	0.36	□□□□□ -2.35
CSN9	YDR179C	YSR3	P23501	404 aa		0.36	□□□□□ -2.35
CSN9	YDR179C	ERG24	P32462	438 aa	Known RBP	0.36	□□□□□ -2.35
CSN9	YDR179C	YHR180W	P38868	163 aa		0.36	□□□□□ -2.35
CSN9	YDR179C	YER076C	P40049	302 aa		0.36	□□□□□ -2.35
CSN9	YDR179C	GTR2	P53290	341 aa		0.36	□□□□□ -2.35
CSN9	YDR179C	HEM25	Q07534	307 aa		0.36	□□□□□ -2.35
CSN9	YDR179C	SNF8	Q12483	233 aa		0.36	□□□□□ -2.35
CSN9	YDR179C	TIR3	P40552	269 aa		0.35	□□□□□ -2.35
CSN9	YDR179C	DSN1	P40568	576 aa		0.35	□□□□□ -2.35
CSN9	YDR179C	RPL33B	P41056	107 aa	Known RBP	0.35	□□□□□ -2.35
CSN9	YDR179C	YLR179C	Q06252	201 aa	Known RBP	0.35	□□□□□ -2.35
CSN9	YDR179C	ARV1	Q06541	321 aa		0.35	□□□□□ -2.35
CSN9	YDR179C	YPL257W	Q08974	193 aa		0.35	□□□□□ -2.35
CSN9	YDR179C	YPL119C-A	Q3E751	87 aa		0.35	□□□□□ -2.35
CSN9	YDR179C	FKS1	P38631	1876 aa	Known RBP	0.35	□□□□□ -2.35
CSN9	YDR179C	SNA3	P14359	133 aa		0.34	□□□□□ -2.36
CSN9	YDR179C	MSA2	P36157	363 aa		0.34	□□□□□ -2.36
CSN9	YDR179C	BIG1	P38813	335 aa		0.34	□□□□□ -2.36
CSN9	YDR179C	RIO2	P40160	425 aa	Known RBP	0.34	□□□□□ -2.36
CSN9	YDR179C	RSM25	P40496	264 aa		0.34	□□□□□ -2.36
CSN9	YDR179C	YGL159W	P53110	370 aa		0.34	□□□□□ -2.36
CSN9	YDR179C	YGL034C	P53186	121 aa		0.34	□□□□□ -2.36
CSN9	YDR179C	PRO2	P54885	456 aa	Known RBP	0.34	□□□□□ -2.36
CSN9	YDR179C	ABZ2	Q03266	374 aa		0.34	□□□□□ -2.36
CSN9	YDR179C	ERV41	Q04651	352 aa		0.34	□□□□□ -2.36
CSN9	YDR179C	ATG39	Q06159	398 aa		0.34	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 104.3 ms