RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W SEC16P48415 2195 aaKnown RBP8.32□□□□□ -1.08
SED1YDR077W URA3P03962 267 aa8.32□□□□□ -1.08
SED1YDR077W DSF1P0CX08 502 aa8.32□□□□□ -1.08
SED1YDR077W YNR073CP0CX09 502 aa8.32□□□□□ -1.08
SED1YDR077W STF2P16965 84 aa8.32□□□□□ -1.08
SED1YDR077W YBL010CP32788 280 aa8.32□□□□□ -1.08
SED1YDR077W UMP1P38293 148 aa8.32□□□□□ -1.08
SED1YDR077W YGL159WP53110 370 aa8.32□□□□□ -1.08
SED1YDR077W RSM27P53305 110 aa8.32□□□□□ -1.08
SED1YDR077W THI72Q08579 599 aa8.32□□□□□ -1.08
SED1YDR077W YOR385WQ08909 290 aa8.32□□□□□ -1.08
SED1YDR077W TMS1Q12116 473 aa8.32□□□□□ -1.08
SED1YDR077W IZH2Q12442 317 aa8.32□□□□□ -1.08
SED1YDR077W TDH3P00359 332 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
SED1YDR077W COX5BP00425 151 aa8.31□□□□□ -1.08
SED1YDR077W RFA3P26755 122 aaKnown RBP8.31□□□□□ -1.08
SED1YDR077W PPZ2P33329 710 aa8.31□□□□□ -1.08
SED1YDR077W ATF1P40353 525 aa8.31□□□□□ -1.08
SED1YDR077W AVT4P50944 713 aa8.31□□□□□ -1.08
SED1YDR077W GTF1P53260 183 aaPredicted RBP8.31□□□□□ -1.08
SED1YDR077W TNA1P53322 534 aa8.31□□□□□ -1.08
SED1YDR077W YNR040WP53736 256 aa8.31□□□□□ -1.08
SED1YDR077W MRX9Q07349 420 aaKnown RBP8.31□□□□□ -1.08
SED1YDR077W USB1Q12208 290 aaKnown RBP8.31□□□□□ -1.08
SED1YDR077W MRP17P28778 131 aa8.3□□□□□ -1.08
SED1YDR077W VMA5P31412 392 aaKnown RBP8.3□□□□□ -1.08
SED1YDR077W ARO4P32449 370 aaKnown RBP8.3□□□□□ -1.08
SED1YDR077W MTC7P32633 139 aa8.3□□□□□ -1.08
SED1YDR077W RPN14P53196 417 aa8.3□□□□□ -1.08
SED1YDR077W HHT1P61830 136 aa8.3□□□□□ -1.08
SED1YDR077W YAP6Q03935 383 aa8.3□□□□□ -1.08
SED1YDR077W PLP1Q04004 230 aa8.3□□□□□ -1.08
SED1YDR077W YLR352WQ06479 807 aa8.3□□□□□ -1.08
SED1YDR077W ERP4Q12450 207 aa8.3□□□□□ -1.08
SED1YDR077W RPL30P14120 105 aaKnown RBP8.29□□□□□ -1.08
SED1YDR077W MRPL27P36526 146 aaPredicted RBP8.29□□□□□ -1.08
SED1YDR077W RRF1P38771 230 aa8.29□□□□□ -1.08
SED1YDR077W YER137CP40083 148 aaKnown RBP8.29□□□□□ -1.08
SED1YDR077W SKP1P52286 194 aa8.29□□□□□ -1.08
SED1YDR077W SUR7P54003 302 aa8.29□□□□□ -1.08
SED1YDR077W RAF1Q06891 181 aa8.29□□□□□ -1.08
SED1YDR077W PRM4Q12498 284 aa8.29□□□□□ -1.08
SED1YDR077W ARG80P07249 177 aa8.28□□□□□ -1.08
SED1YDR077W FMT1P32785 401 aa8.28□□□□□ -1.08
SED1YDR077W PAN3P36102 679 aaPredicted RBP8.28□□□□□ -1.08
SED1YDR077W FLO10P36170 1169 aa8.28□□□□□ -1.08
SED1YDR077W GNA1P43577 159 aaPredicted RBP8.28□□□□□ -1.08
SED1YDR077W RPS0BP46654 252 aaKnown RBP8.28□□□□□ -1.08
SED1YDR077W PHB2P50085 310 aa8.28□□□□□ -1.08
SED1YDR077W YGL260WP53056 76 aa8.28□□□□□ -1.08
SED1YDR077W NSA1P53136 463 aaPredicted RBP8.28□□□□□ -1.08
SED1YDR077W RCE1Q03530 315 aa8.28□□□□□ -1.08
SED1YDR077W RFU1Q08003 200 aa8.28□□□□□ -1.08
SED1YDR077W PET20Q99373 253 aa8.28□□□□□ -1.08
SED1YDR077W PHO2P07269 559 aa8.27□□□□□ -1.09
SED1YDR077W HNM1P19807 563 aa8.27□□□□□ -1.09
SED1YDR077W DEG1P31115 442 aaKnown RBP8.27□□□□□ -1.09
SED1YDR077W YKL063CP35725 167 aa8.27□□□□□ -1.09
SED1YDR077W YND1P40009 630 aa8.27□□□□□ -1.09
SED1YDR077W ECM27P47144 725 aa8.27□□□□□ -1.09
SED1YDR077W ACS2P52910 683 aaKnown RBP8.27□□□□□ -1.09
SED1YDR077W TYW3P53177 273 aa8.27□□□□□ -1.09
SED1YDR077W YML018CQ03730 393 aa8.27□□□□□ -1.09
SED1YDR077W COA4Q05809 96 aa8.27□□□□□ -1.09
SED1YDR077W YNG1Q08465 219 aa8.27□□□□□ -1.09
SED1YDR077W SPS4P09937 338 aa8.26□□□□□ -1.09
SED1YDR077W MCM1P11746 286 aa8.26□□□□□ -1.09
SED1YDR077W ACB1P31787 87 aa8.26□□□□□ -1.09
SED1YDR077W ERG3P32353 365 aa8.26□□□□□ -1.09
SED1YDR077W MRPS5P33759 307 aa8.26□□□□□ -1.09
SED1YDR077W MRPL36P36531 177 aa8.26□□□□□ -1.09
SED1YDR077W YMR262WP38430 313 aa8.26□□□□□ -1.09
SED1YDR077W MTC6P38849 526 aa8.26□□□□□ -1.09
SED1YDR077W SWM2P40342 146 aa8.26□□□□□ -1.09
SED1YDR077W QDR1P40475 563 aa8.26□□□□□ -1.09
SED1YDR077W XBP1P40489 647 aa8.26□□□□□ -1.09
SED1YDR077W GPP1P41277 250 aaKnown RBP8.26□□□□□ -1.09
SED1YDR077W MOB2P43563 287 aa8.26□□□□□ -1.09
SED1YDR077W ORM1P53224 222 aa8.26□□□□□ -1.09
SED1YDR077W SRP1Q02821 542 aaKnown RBP8.26□□□□□ -1.09
SED1YDR077W YDR391CQ04170 232 aa8.26□□□□□ -1.09
SED1YDR077W YDL218WQ07629 317 aa8.26□□□□□ -1.09
SED1YDR077W HUT1Q12520 339 aa8.26□□□□□ -1.09
SED1YDR077W RPL35AP0CX84 120 aaKnown RBP8.25□□□□□ -1.09
SED1YDR077W RPL35BP0CX85 120 aaKnown RBP8.25□□□□□ -1.09
SED1YDR077W PET122P10355 254 aa8.25□□□□□ -1.09
SED1YDR077W CPR4P25334 318 aa8.25□□□□□ -1.09
SED1YDR077W SUA5P32579 426 aa8.25□□□□□ -1.09
SED1YDR077W VAM7P32912 316 aa8.25□□□□□ -1.09
SED1YDR077W ARC40P38328 384 aaKnown RBP8.25□□□□□ -1.09
SED1YDR077W YER084WP40057 128 aa8.25□□□□□ -1.09
SED1YDR077W ALG9P53868 555 aaKnown RBP8.25□□□□□ -1.09
SED1YDR077W SMX3P54999 86 aaPredicted RBP8.25□□□□□ -1.09
SED1YDR077W YDR248CQ03786 193 aa8.25□□□□□ -1.09
SED1YDR077W SPR28Q04921 423 aa8.25□□□□□ -1.09
SED1YDR077W YLR224WQ05947 369 aa8.25□□□□□ -1.09
SED1YDR077W TFB5Q3E7C1 72 aaPredicted RBP8.25□□□□□ -1.09
SED1YDR077W CDC39P25655 2108 aaKnown RBP8.24□□□□□ -1.09
SED1YDR077W AAC1P04710 309 aa8.24□□□□□ -1.09
SED1YDR077W RPS31P05759 152 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms