RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR048C	YDR048C	FLO9	P39712	1322 aa		0.25	□□□□□ -2.37
YDR048C	YDR048C	RPP0	P05317	312 aa	Known RBP	0.25	□□□□□ -2.37
YDR048C	YDR048C	ICL1	P28240	557 aa	Predicted RBP	0.25	□□□□□ -2.37
YDR048C	YDR048C	SSH1	P38353	490 aa	Known RBP	0.25	□□□□□ -2.37
YDR048C	YDR048C	PEX18	P38855	283 aa		0.25	□□□□□ -2.37
YDR048C	YDR048C	VPS45	P38932	577 aa		0.25	□□□□□ -2.37
YDR048C	YDR048C	VBA1	Q04301	562 aa		0.25	□□□□□ -2.37
YDR048C	YDR048C	YPR011C	Q12251	326 aa		0.25	□□□□□ -2.37
YDR048C	YDR048C	BBP1	Q12365	385 aa		0.25	□□□□□ -2.37
YDR048C	YDR048C	RPC40	P07703	335 aa	Known RBP	0.24	□□□□□ -2.37
YDR048C	YDR048C	SAR1	P20606	190 aa	Known RBP	0.24	□□□□□ -2.37
YDR048C	YDR048C	RPC25	P35718	212 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	HIS2	P38635	335 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	YHR180W	P38868	163 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	ICE2	P40499	491 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	YIL001W	P40560	513 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	LOC1	P43586	204 aa	Predicted RBP	0.24	□□□□□ -2.37
YDR048C	YDR048C	TOS8	P53147	276 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	VOA1	P53262	265 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	CPD1	P53314	239 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	ERV29	P53337	310 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	UBC7	Q02159	165 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	RRG8	Q06109	277 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	VAC14	Q06708	880 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	YPL119C-A	Q3E751	87 aa		0.24	□□□□□ -2.37
YDR048C	YDR048C	YLR462W	O13556	202 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	GPI12	P23797	304 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	SMI1	P32566	505 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.23	□□□□□ -2.37	not detected
YDR048C	YDR048C	APE4	P38821	490 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	MNN9	P39107	395 aa	Known RBP	0.23	□□□□□ -2.37
YDR048C	YDR048C	YEL075C	P39972	122 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	YER076C	P40049	302 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	YER189W	P40104	122 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	YGL034C	P53186	121 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	TIM21	P53220	239 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	CDC14	Q00684	551 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	ARR2	Q06597	130 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	YBL008W-A	Q3E821	79 aa		0.23	□□□□□ -2.37
YDR048C	YDR048C	SIR4	P11978	1358 aa		0.22	□□□□□ -2.37
YDR048C	YDR048C	RPL9A	P05738	191 aa	Known RBP	0.22	□□□□□ -2.37
YDR048C	YDR048C	PET9	P18239	318 aa	Known RBP	0.22	□□□□□ -2.37
YDR048C	YDR048C	RPL9B	P51401	191 aa	Known RBP	0.22	□□□□□ -2.37
YDR048C	YDR048C	MNT4	P53745	580 aa		0.22	□□□□□ -2.37
YDR048C	YDR048C	YMR007W	Q03675	126 aa		0.22	□□□□□ -2.37
YDR048C	YDR048C	MGR3	Q04472	501 aa		0.22	□□□□□ -2.37
YDR048C	YDR048C	GRX2	P17695	143 aa	Known RBP	0.21	□□□□□ -2.38
YDR048C	YDR048C	POF1	P25576	258 aa		0.21	□□□□□ -2.38
YDR048C	YDR048C	YEL067C	P39978	195 aa		0.21	□□□□□ -2.38
YDR048C	YDR048C	MAL13	P53338	473 aa		0.21	□□□□□ -2.38
YDR048C	YDR048C	FAR8	Q05040	523 aa		0.21	□□□□□ -2.38
YDR048C	YDR048C	BCP1	Q06338	283 aa		0.21	□□□□□ -2.38
YDR048C	YDR048C	PER33	Q12144	273 aa		0.21	□□□□□ -2.38
YDR048C	YDR048C	MSW1	P04803	379 aa		0.2	□□□□□ -2.38
YDR048C	YDR048C	QCR8	P08525	94 aa		0.2	□□□□□ -2.38
YDR048C	YDR048C	AQY2	P0CD90	149 aa		0.2	□□□□□ -2.38
YDR048C	YDR048C	FRS2	P15625	503 aa	Known RBP	0.2	□□□□□ -2.38
YDR048C	YDR048C	VMA11	P32842	164 aa		0.2	□□□□□ -2.38
YDR048C	YDR048C	JHD2	P47156	728 aa	Predicted RBP	0.2	□□□□□ -2.38
YDR048C	YDR048C	PRO2	P54885	456 aa	Known RBP	0.2	□□□□□ -2.38
YDR048C	YDR048C	CUR1	Q06469	252 aa		0.2	□□□□□ -2.38
YDR048C	YDR048C	ARV1	Q06541	321 aa		0.2	□□□□□ -2.38
YDR048C	YDR048C	YPL162C	Q12042	273 aa		0.2	□□□□□ -2.38
YDR048C	YDR048C	SME1	Q12330	94 aa	Predicted RBP	0.2	□□□□□ -2.38
YDR048C	YDR048C	STH1	P32597	1359 aa		0.19	□□□□□ -2.38
YDR048C	YDR048C	NSP1	P14907	823 aa	Known RBP	0.19	□□□□□ -2.38
YDR048C	YDR048C	TMA19	P35691	167 aa	Known RBP	0.19	□□□□□ -2.38
YDR048C	YDR048C	HEM25	Q07534	307 aa		0.19	□□□□□ -2.38
YDR048C	YDR048C	CYR1	P08678	2026 aa	Known RBP	0.18	□□□□□ -2.38
YDR048C	YDR048C	MSA2	P36157	363 aa		0.18	□□□□□ -2.38
YDR048C	YDR048C	LSB1	P53281	241 aa		0.18	□□□□□ -2.38
YDR048C	YDR048C	GTR2	P53290	341 aa		0.18	□□□□□ -2.38
YDR048C	YDR048C	SPP2	Q02521	185 aa		0.18	□□□□□ -2.38
YDR048C	YDR048C	YLR179C	Q06252	201 aa	Known RBP	0.18	□□□□□ -2.38
YDR048C	YDR048C	YLR030W	Q07967	263 aa		0.18	□□□□□ -2.38
YDR048C	YDR048C	RRS1	Q08746	203 aa	Known RBP	0.18	□□□□□ -2.38
YDR048C	YDR048C	TPO4	Q12256	659 aa		0.18	□□□□□ -2.38
YDR048C	YDR048C	GCD2	P12754	651 aa	Predicted RBP	0.17	□□□□□ -2.38
YDR048C	YDR048C	SNA3	P14359	133 aa		0.17	□□□□□ -2.38
YDR048C	YDR048C	CSM1	P25651	190 aa		0.17	□□□□□ -2.38
YDR048C	YDR048C	ERG24	P32462	438 aa	Known RBP	0.17	□□□□□ -2.38
YDR048C	YDR048C	HSM3	P38348	480 aa		0.17	□□□□□ -2.38
YDR048C	YDR048C	MRH4	P53166	561 aa		0.17	□□□□□ -2.38
YDR048C	YDR048C	YDR124W	Q04608	324 aa		0.17	□□□□□ -2.38
YDR048C	YDR048C	SNF8	Q12483	233 aa		0.17	□□□□□ -2.38
YDR048C	YDR048C	SWI1	P09547	1314 aa		0.16	□□□□□ -2.38
YDR048C	YDR048C	MEI4	P29467	408 aa		0.16	□□□□□ -2.38
YDR048C	YDR048C	FZF1	P32805	299 aa		0.16	□□□□□ -2.38
YDR048C	YDR048C	FZO1	P38297	855 aa		0.16	□□□□□ -2.38
YDR048C	YDR048C	BIG1	P38813	335 aa		0.16	□□□□□ -2.38
YDR048C	YDR048C	RIO2	P40160	425 aa	Known RBP	0.16	□□□□□ -2.38
YDR048C	YDR048C	DSN1	P40568	576 aa		0.16	□□□□□ -2.38
YDR048C	YDR048C	YGL159W	P53110	370 aa		0.16	□□□□□ -2.38
YDR048C	YDR048C	YNL260C	P53846	198 aa		0.16	□□□□□ -2.38
YDR048C	YDR048C	ABZ2	Q03266	374 aa		0.16	□□□□□ -2.38
YDR048C	YDR048C	RSR1	P13856	272 aa		0.15	□□□□□ -2.39
YDR048C	YDR048C	PBN1	P25580	416 aa		0.15	□□□□□ -2.39
YDR048C	YDR048C	THO1	P40040	218 aa	Known RBP	0.15	□□□□□ -2.39
YDR048C	YDR048C	FIS1	P40515	155 aa		0.15	□□□□□ -2.39
YDR048C	YDR048C	TIR3	P40552	269 aa		0.15	□□□□□ -2.39

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