RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-DYDR034C-D BBP1Q12365 385 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D YOR304C-AO14468 76 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D MCK1P21965 375 aaKnown RBP2.48□□□□□ -2.01
YDR034C-DYDR034C-D PRM5P40476 318 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D YIA6P40556 373 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D SSU72P53538 206 aaPredicted RBP2.48□□□□□ -2.01
YDR034C-DYDR034C-D ADD37Q03233 198 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D FCF2Q12035 217 aaPredicted RBP2.48□□□□□ -2.01
YDR034C-DYDR034C-D AGC1Q12482 902 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D GCY1P14065 312 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
YDR034C-DYDR034C-D ISY1P21374 235 aaPredicted RBP2.48□□□□□ -2.01
YDR034C-DYDR034C-D INO2P26798 304 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D ARO7P32178 256 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D KTI12P34253 313 aaKnown RBP2.48□□□□□ -2.01
YDR034C-DYDR034C-D MRPL28P36527 147 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D HTZ1Q12692 134 aaKnown RBP2.48□□□□□ -2.01
YDR034C-DYDR034C-D ERD1P16151 362 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D SHE1P38200 338 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D ARC40P38328 384 aaKnown RBP2.48□□□□□ -2.01
YDR034C-DYDR034C-D GVP36P40531 326 aaKnown RBP2.48□□□□□ -2.01
YDR034C-DYDR034C-D YGL082WP53155 381 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D SPG4Q04438 115 aa2.48□□□□□ -2.01
YDR034C-DYDR034C-D RPL4AP10664 362 aaKnown RBP2.47□□□□□ -2.01
YDR034C-DYDR034C-D PPH21P23594 369 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D RGI1P40043 161 aaPredicted RBP2.47□□□□□ -2.01
YDR034C-DYDR034C-D ICE2P40499 491 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D RPL4BP49626 362 aaKnown RBP2.47□□□□□ -2.01
YDR034C-DYDR034C-D STE7P06784 515 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D PUT1P09368 476 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D RPB5P20434 215 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D YCR043CP25361 127 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D CAF4P36130 643 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D YJL016WP47072 561 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D MMS2P53152 137 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D CRZ1P53968 678 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D ERV2Q12284 196 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D EAF3Q12432 401 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D MSI1P13712 422 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D ILV6P25605 309 aaKnown RBP2.47□□□□□ -2.01
YDR034C-DYDR034C-D HEK2P38199 381 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
YDR034C-DYDR034C-D UBC12P52491 188 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D DXO1Q06349 442 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D YOR186WQ08560 144 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D RRG9P40156 214 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D WSC2P53832 503 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D PRM15Q03262 622 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D NHP10Q03435 203 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D DML1Q03652 475 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D RIF2Q06208 395 aa2.47□□□□□ -2.01
YDR034C-DYDR034C-D RRP42Q12277 265 aaPredicted RBP2.47□□□□□ -2.01
YDR034C-DYDR034C-D CAT2P32796 670 aaKnown RBP2.46□□□□□ -2.02
YDR034C-DYDR034C-D CSE2P33308 149 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D MRPL3P36516 390 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D FIG1P38224 298 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D RFS1P38234 210 aaKnown RBP2.46□□□□□ -2.02
YDR034C-DYDR034C-D PEX17P40155 199 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D AVT7P40501 490 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D ACT1P60010 375 aaKnown RBP2.46□□□□□ -2.02
YDR034C-DYDR034C-D ORM2Q06144 216 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D YPL257WQ08974 193 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D NSL1Q12143 216 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D YBL010CP32788 280 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D YJL213WP40896 331 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D YPL113CQ02961 396 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D RPL28P02406 149 aaKnown RBP2.46□□□□□ -2.02
YDR034C-DYDR034C-D LSM12P38828 187 aaKnown RBP2.46□□□□□ -2.02
YDR034C-DYDR034C-D PGU1P47180 361 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D YGR015CP53208 328 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D DYN3Q04949 312 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D DTD1Q07648 150 aaKnown RBP2.46□□□□□ -2.02
YDR034C-DYDR034C-D YPL150WQ12152 901 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D YCL021W-AQ96VH3 125 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D TRR1P29509 319 aaKnown RBP2.46□□□□□ -2.02
YDR034C-DYDR034C-D LSM2P38203 95 aaKnown RBP2.46□□□□□ -2.02
YDR034C-DYDR034C-D SHG1P38337 142 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D WSC4P38739 605 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D YIL067CP40514 678 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D RPA43P46669 326 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D YLR031WQ07978 186 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D RAX2Q12465 1220 aa2.46□□□□□ -2.02
YDR034C-DYDR034C-D CPR5P35176 225 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D TRM5P38793 499 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D MRH4P53166 561 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D NUP49Q02199 472 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D RRS1Q08746 203 aaKnown RBP2.45□□□□□ -2.02
YDR034C-DYDR034C-D YPL245WQ12179 454 aaKnown RBP2.45□□□□□ -2.02
YDR034C-DYDR034C-D YGL041W-AP0C5N3 154 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D OAC1P32332 324 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D MRS1P07266 363 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D CPR4P25334 318 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D HMT1P38074 348 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D YHR127WP38833 243 aaKnown RBP2.45□□□□□ -2.02
YDR034C-DYDR034C-D NCA3P46955 337 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D DID2P69771 204 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D SNU23Q12368 194 aaPredicted RBP2.45□□□□□ -2.02
YDR034C-DYDR034C-D CPR1P14832 162 aaKnown RBP2.45□□□□□ -2.02
YDR034C-DYDR034C-D COS8P38723 381 aa2.45□□□□□ -2.02
YDR034C-DYDR034C-D TMA20P89886 181 aaPredicted RBP2.45□□□□□ -2.02
YDR034C-DYDR034C-D YDR415CQ04033 374 aaPredicted RBP2.45□□□□□ -2.02
YDR034C-DYDR034C-D SML1Q04964 104 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms