RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W RRS1Q08746 203 aaKnown RBP1.83□□□□□ -2.12
SHS1YDL225W MSH5Q12175 901 aa1.83□□□□□ -2.12
SHS1YDL225W YKR104WP0CE69 306 aa1.83□□□□□ -2.12
SHS1YDL225W DRE2P36152 348 aa1.83□□□□□ -2.12
SHS1YDL225W SSH1P38353 490 aaKnown RBP1.83□□□□□ -2.12
SHS1YDL225W YJR146WP47174 117 aa1.83□□□□□ -2.12
SHS1YDL225W DSK2P48510 373 aa1.83□□□□□ -2.12
SHS1YDL225W USE1P53146 245 aa1.83□□□□□ -2.12
SHS1YDL225W MRH4P53166 561 aa1.83□□□□□ -2.12
SHS1YDL225W CAB4P53332 305 aa1.83□□□□□ -2.12
SHS1YDL225W SNZ2P53824 298 aa1.83□□□□□ -2.12
SHS1YDL225W RGM1Q00453 211 aa1.83□□□□□ -2.12
SHS1YDL225W SPO77Q06134 477 aa1.83□□□□□ -2.12
SHS1YDL225W VPS68Q12016 184 aa1.83□□□□□ -2.12
SHS1YDL225W ATG31Q12421 196 aa1.83□□□□□ -2.12
SHS1YDL225W SNF6P18888 332 aa1.82□□□□□ -2.12
SHS1YDL225W CLB6P32943 380 aa1.82□□□□□ -2.12
SHS1YDL225W THO1P40040 218 aaKnown RBP1.82□□□□□ -2.12
SHS1YDL225W COG3P40094 801 aa1.82□□□□□ -2.12
SHS1YDL225W YJL016WP47072 561 aa1.82□□□□□ -2.12
SHS1YDL225W PAM18Q07914 168 aa1.82□□□□□ -2.12
SHS1YDL225W CSM4Q08955 156 aa1.82□□□□□ -2.12
SHS1YDL225W YCT1Q12235 531 aa1.82□□□□□ -2.12
SHS1YDL225W EMP46Q12396 444 aa1.82□□□□□ -2.12
SHS1YDL225W FZO1P38297 855 aa1.81□□□□□ -2.12
SHS1YDL225W YGP1P38616 354 aaKnown RBP1.81□□□□□ -2.12
SHS1YDL225W GOS1P38736 223 aa1.81□□□□□ -2.12
SHS1YDL225W SPG4Q04438 115 aa1.81□□□□□ -2.12
SHS1YDL225W YDR124WQ04608 324 aa1.81□□□□□ -2.12
SHS1YDL225W SYC1Q08553 188 aaPredicted RBP1.81□□□□□ -2.12
SHS1YDL225W MED4Q12343 284 aa1.81□□□□□ -2.12
SHS1YDL225W SGA1P08019 549 aa1.8□□□□□ -2.12
SHS1YDL225W SEC22P22214 214 aa1.8□□□□□ -2.12
SHS1YDL225W SGE1P33335 543 aa1.8□□□□□ -2.12
SHS1YDL225W TIF34P40217 347 aaKnown RBP1.8□□□□□ -2.12
SHS1YDL225W MRPL50P53724 139 aa1.8□□□□□ -2.12
SHS1YDL225W SLM2P53955 656 aa1.8□□□□□ -2.12
SHS1YDL225W RSM10Q03201 203 aa1.8□□□□□ -2.12
SHS1YDL225W GOT1Q03554 138 aa1.8□□□□□ -2.12
SHS1YDL225W YLR179CQ06252 201 aaKnown RBP1.8□□□□□ -2.12
SHS1YDL225W YOR186WQ08560 144 aa1.8□□□□□ -2.12
SHS1YDL225W SNU23Q12368 194 aaPredicted RBP1.8□□□□□ -2.12
SHS1YDL225W SWI1P09547 1314 aa1.8□□□□□ -2.12
SHS1YDL225W TCP1P12612 559 aaKnown RBP1.8□□□□□ -2.12
SHS1YDL225W RCN1P36054 211 aa1.8□□□□□ -2.12
SHS1YDL225W MRPL39P36533 70 aa1.8□□□□□ -2.12
SHS1YDL225W YHB1P39676 399 aaKnown RBP1.8□□□□□ -2.12
SHS1YDL225W YER189WP40104 122 aa1.8□□□□□ -2.12
SHS1YDL225W OST2P46964 130 aa1.8□□□□□ -2.12
SHS1YDL225W JHD2P47156 728 aaPredicted RBP1.8□□□□□ -2.12
SHS1YDL225W SRL4Q03085 281 aa1.8□□□□□ -2.12
SHS1YDL225W PEX12Q04370 399 aa1.8□□□□□ -2.12
SHS1YDL225W TY3A-GQ12173 290 aa1.8□□□□□ -2.12
SHS1YDL225W TY3A-IQ99219 290 aa1.8□□□□□ -2.12
SHS1YDL225W SAS5Q99314 248 aa1.8□□□□□ -2.12
SHS1YDL225W BFR1P38934 470 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12 RIP-Chip
SHS1YDL225W YJR079WP47126 109 aa1.79□□□□□ -2.12
SHS1YDL225W COS6P53344 381 aa1.79□□□□□ -2.12
SHS1YDL225W RRP40Q08285 240 aaKnown RBP1.79□□□□□ -2.12
SHS1YDL225W YLR462WO13556 202 aa1.78□□□□□ -2.12
SHS1YDL225W COS8P38723 381 aa1.78□□□□□ -2.12
SHS1YDL225W YEL075CP39972 122 aa1.78□□□□□ -2.12
SHS1YDL225W MRPL49P40858 161 aaPredicted RBP1.78□□□□□ -2.12
SHS1YDL225W HOC1P47124 396 aa1.78□□□□□ -2.12
SHS1YDL225W RHO3Q00245 231 aaKnown RBP1.78□□□□□ -2.12
SHS1YDL225W KRE28Q04431 385 aa1.78□□□□□ -2.12
SHS1YDL225W MSA2P36157 363 aa1.77□□□□□ -2.13
SHS1YDL225W YHL026CP38740 315 aa1.77□□□□□ -2.13
SHS1YDL225W FMC1P40491 155 aa1.77□□□□□ -2.13
SHS1YDL225W MNN5P46982 586 aa1.77□□□□□ -2.13
SHS1YDL225W BBP1Q12365 385 aa1.77□□□□□ -2.13
SHS1YDL225W CCA1P21269 546 aa1.77□□□□□ -2.13
SHS1YDL225W SCM4P32564 187 aa1.77□□□□□ -2.13
SHS1YDL225W YHR127WP38833 243 aaKnown RBP1.77□□□□□ -2.13
SHS1YDL225W YGL159WP53110 370 aa1.77□□□□□ -2.13
SHS1YDL225W PET117Q02771 107 aa1.77□□□□□ -2.13
SHS1YDL225W YCR016WP25617 290 aaKnown RBP1.76□□□□□ -2.13
SHS1YDL225W SRB4P32569 687 aa1.76□□□□□ -2.13
SHS1YDL225W YKL075CP36083 450 aa1.76□□□□□ -2.13
SHS1YDL225W LDB7P38210 180 aa1.76□□□□□ -2.13
SHS1YDL225W YNL046WP53956 172 aa1.76□□□□□ -2.13
SHS1YDL225W CGI121Q03705 181 aaKnown RBP1.76□□□□□ -2.13
SHS1YDL225W FAR8Q05040 523 aa1.76□□□□□ -2.13
SHS1YDL225W SEI1Q06058 285 aa1.76□□□□□ -2.13
SHS1YDL225W YLR126CQ12288 251 aa1.76□□□□□ -2.13
SHS1YDL225W FKS1P38631 1876 aaKnown RBP1.75□□□□□ -2.13
SHS1YDL225W Q0255P03881 472 aa1.75□□□□□ -2.13
SHS1YDL225W ERG24P32462 438 aaKnown RBP1.75□□□□□ -2.13
SHS1YDL225W ARC15P40518 154 aaRIP-Chip data1.75□□□□□ -2.13not detected
SHS1YDL225W YLR030WQ07967 263 aa1.75□□□□□ -2.13
SHS1YDL225W YOR283WQ12040 230 aaKnown RBP1.75□□□□□ -2.13
SHS1YDL225W EMC6Q12431 108 aa1.75□□□□□ -2.13
SHS1YDL225W BEM2P39960 2167 aaKnown RBP1.74□□□□□ -2.13
SHS1YDL225W CFT1Q06632 1357 aaKnown RBP1.74□□□□□ -2.13
SHS1YDL225W YHR032W-AP0C5N6 59 aa1.74□□□□□ -2.13
SHS1YDL225W SCO1P23833 295 aa1.74□□□□□ -2.13
SHS1YDL225W YCR102CP25608 368 aa1.74□□□□□ -2.13
SHS1YDL225W SNX4P47057 423 aa1.74□□□□□ -2.13
SHS1YDL225W INM2Q05533 292 aa1.74□□□□□ -2.13
SHS1YDL225W YLR283WQ05867 314 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms