RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C PEX12Q04370 399 aa2.54□□□□□ -2
RRI1YDL216C ADH6Q04894 360 aaKnown RBP2.54□□□□□ -2
RRI1YDL216C COX20Q04935 205 aa2.54□□□□□ -2
RRI1YDL216C TAF2P23255 1407 aa2.54□□□□□ -2
RRI1YDL216C SSK2P53599 1579 aa2.54□□□□□ -2
RRI1YDL216C DAL82P21705 255 aa2.53□□□□□ -2
RRI1YDL216C VPS3P23643 1011 aa2.53□□□□□ -2
RRI1YDL216C MPP6P53725 186 aaPredicted RBP2.53□□□□□ -2
RRI1YDL216C EBS1Q03466 884 aaKnown RBP2.53□□□□□ -2
RRI1YDL216C EMC6Q12431 108 aa2.53□□□□□ -2
RRI1YDL216C YPL119C-AQ3E751 87 aa2.53□□□□□ -2
RRI1YDL216C LTE1P07866 1435 aa2.52□□□□□ -2.01
RRI1YDL216C MMS1Q06211 1407 aa2.52□□□□□ -2.01
RRI1YDL216C PRS2P38620 318 aaKnown RBP2.52□□□□□ -2.01
RRI1YDL216C ATG17Q06410 417 aa2.52□□□□□ -2.01
RRI1YDL216C YBL008W-AQ3E821 79 aa2.52□□□□□ -2.01
RRI1YDL216C GEA2P39993 1459 aaKnown RBP2.51□□□□□ -2.01
RRI1YDL216C QRI5P32344 111 aa2.51□□□□□ -2.01
RRI1YDL216C SSH1P38353 490 aaKnown RBP2.51□□□□□ -2.01
RRI1YDL216C YJL118WP47022 219 aa2.51□□□□□ -2.01
RRI1YDL216C SAS5Q99314 248 aa2.51□□□□□ -2.01
RRI1YDL216C SGA1P08019 549 aa2.5□□□□□ -2.01
RRI1YDL216C SCM4P32564 187 aa2.5□□□□□ -2.01
RRI1YDL216C NBP1P52919 319 aaPredicted RBP2.5□□□□□ -2.01
RRI1YDL216C EMP46Q12396 444 aa2.5□□□□□ -2.01
RRI1YDL216C POL30P15873 258 aaKnown RBP2.49□□□□□ -2.01
RRI1YDL216C CCA1P21269 546 aa2.49□□□□□ -2.01
RRI1YDL216C RIB7P33312 244 aa2.49□□□□□ -2.01
RRI1YDL216C GRE3P38715 327 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
RRI1YDL216C OST2P46964 130 aa2.49□□□□□ -2.01
RRI1YDL216C DAN1P47178 298 aa2.49□□□□□ -2.01
RRI1YDL216C YDR124WQ04608 324 aa2.49□□□□□ -2.01
RRI1YDL216C YPR011CQ12251 326 aa2.49□□□□□ -2.01
RRI1YDL216C RPO31P04051 1460 aa2.49□□□□□ -2.01
RRI1YDL216C RKR1Q04781 1562 aa2.48□□□□□ -2.01
RRI1YDL216C NTE1Q04958 1679 aa2.48□□□□□ -2.01
RRI1YDL216C NRG2P38082 220 aa2.48□□□□□ -2.01
RRI1YDL216C YDR209CQ03480 137 aa2.48□□□□□ -2.01
RRI1YDL216C YPR147CQ06522 304 aaKnown RBP2.48□□□□□ -2.01
RRI1YDL216C MRX3P38172 270 aa2.47□□□□□ -2.01
RRI1YDL216C MEP1P40260 492 aa2.47□□□□□ -2.01
RRI1YDL216C MRH4P53166 561 aa2.47□□□□□ -2.01
RRI1YDL216C KAP95Q06142 861 aaKnown RBP2.47□□□□□ -2.01
RRI1YDL216C BTS1Q12051 335 aa2.47□□□□□ -2.01
RRI1YDL216C SEC22P22214 214 aa2.46□□□□□ -2.02
RRI1YDL216C YOR062CP36025 268 aa2.46□□□□□ -2.02
RRI1YDL216C JEN1P36035 616 aa2.46□□□□□ -2.02
RRI1YDL216C RCN1P36054 211 aa2.46□□□□□ -2.02
RRI1YDL216C PRS4P38063 326 aaPredicted RBP2.46□□□□□ -2.02
RRI1YDL216C COS8P38723 381 aa2.46□□□□□ -2.02
RRI1YDL216C SMB1P40018 196 aaKnown RBP2.46□□□□□ -2.02
RRI1YDL216C RSM10Q03201 203 aa2.46□□□□□ -2.02
RRI1YDL216C GOT1Q03554 138 aa2.46□□□□□ -2.02
RRI1YDL216C SYC1Q08553 188 aaPredicted RBP2.46□□□□□ -2.02
RRI1YDL216C RRP36Q12481 300 aaPredicted RBP2.46□□□□□ -2.02
RRI1YDL216C MSF1P08425 469 aa2.45□□□□□ -2.02
RRI1YDL216C YKR104WP0CE69 306 aa2.45□□□□□ -2.02
RRI1YDL216C RNA15P25299 296 aaPredicted RBP2.45□□□□□ -2.02
RRI1YDL216C HOM6P31116 359 aaKnown RBP2.45□□□□□ -2.02
RRI1YDL216C FZO1P38297 855 aa2.45□□□□□ -2.02
RRI1YDL216C YER189WP40104 122 aa2.45□□□□□ -2.02
RRI1YDL216C SNX4P47057 423 aa2.45□□□□□ -2.02
RRI1YDL216C DOP1Q03921 1698 aa2.45□□□□□ -2.02
RRI1YDL216C YPR098CQ06089 161 aa2.45□□□□□ -2.02
RRI1YDL216C COQ10Q08058 207 aa2.45□□□□□ -2.02
RRI1YDL216C PUT1P09368 476 aa2.44□□□□□ -2.02
RRI1YDL216C YHB1P39676 399 aaKnown RBP2.44□□□□□ -2.02
RRI1YDL216C THO1P40040 218 aaKnown RBP2.44□□□□□ -2.02
RRI1YDL216C YGL034CP53186 121 aa2.44□□□□□ -2.02
RRI1YDL216C SDO1Q07953 250 aaKnown RBP2.44□□□□□ -2.02
RRI1YDL216C RRP40Q08285 240 aaKnown RBP2.44□□□□□ -2.02
RRI1YDL216C MET5P47169 1442 aa2.44□□□□□ -2.02
RRI1YDL216C YLR462WO13556 202 aa2.43□□□□□ -2.02
RRI1YDL216C YCR102CP25608 368 aa2.43□□□□□ -2.02
RRI1YDL216C MRPL39P36533 70 aa2.43□□□□□ -2.02
RRI1YDL216C YEL075CP39972 122 aa2.43□□□□□ -2.02
RRI1YDL216C ARC15P40518 154 aaRIP-Chip data2.43□□□□□ -2.02not detected
RRI1YDL216C SNZ3P43545 298 aa2.43□□□□□ -2.02
RRI1YDL216C CTF19Q02732 369 aa2.43□□□□□ -2.02
RRI1YDL216C DCR2Q05924 578 aa2.43□□□□□ -2.02
RRI1YDL216C CSM4Q08955 156 aa2.43□□□□□ -2.02
RRI1YDL216C BBP1Q12365 385 aa2.43□□□□□ -2.02
RRI1YDL216C TY1B-BRQ12193 1756 aa2.43□□□□□ -2.02
RRI1YDL216C TY1B-GR3Q12316 1755 aa2.43□□□□□ -2.02
RRI1YDL216C TY1B-ORQ92393 1755 aa2.43□□□□□ -2.02
RRI1YDL216C RSR1P13856 272 aa2.42□□□□□ -2.02
RRI1YDL216C SGE1P33335 543 aa2.42□□□□□ -2.02
RRI1YDL216C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
RRI1YDL216C BIG1P38813 335 aa2.42□□□□□ -2.02
RRI1YDL216C GLG2P47011 380 aa2.42□□□□□ -2.02
RRI1YDL216C USE1P53146 245 aa2.42□□□□□ -2.02
RRI1YDL216C SPG4Q04438 115 aa2.42□□□□□ -2.02
RRI1YDL216C MHT1Q12525 324 aa2.42□□□□□ -2.02
RRI1YDL216C YRF1-1P0CX20 1796 aa2.42□□□□□ -2.02
RRI1YDL216C YRF1-5P0CX21 1796 aa2.42□□□□□ -2.02
RRI1YDL216C YRF1-8P0CX22 1796 aa2.42□□□□□ -2.02
RRI1YDL216C EHD3P28817 500 aa2.42□□□□□ -2.02
RRI1YDL216C YJL027CP47063 138 aaPredicted RBP2.42□□□□□ -2.02
RRI1YDL216C FAR8Q05040 523 aa2.42□□□□□ -2.02
RRI1YDL216C YLR179CQ06252 201 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms