RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	ECM13	P38195	257 aa		3.1	□□□□□ -1.91
YPK3	YBR028C	GOS1	P38736	223 aa		3.1	□□□□□ -1.91
YPK3	YBR028C	SNZ3	P43545	298 aa		3.1	□□□□□ -1.91
YPK3	YBR028C	MDM34	P53083	459 aa		3.1	□□□□□ -1.91
YPK3	YBR028C	HOP2	P53187	214 aa		3.1	□□□□□ -1.91
YPK3	YBR028C	YPR098C	Q06089	161 aa		3.1	□□□□□ -1.91
YPK3	YBR028C	ATG17	Q06410	417 aa		3.1	□□□□□ -1.91
YPK3	YBR028C	YKR104W	P0CE69	306 aa		3.09	□□□□□ -1.91
YPK3	YBR028C	DPB2	P24482	689 aa	Predicted RBP	3.09	□□□□□ -1.91
YPK3	YBR028C	MSN4	P33749	630 aa		3.09	□□□□□ -1.91
YPK3	YBR028C	TEM1	P38987	245 aa		3.09	□□□□□ -1.91
YPK3	YBR028C	FMC1	P40491	155 aa		3.09	□□□□□ -1.91
YPK3	YBR028C	HOC1	P47124	396 aa		3.09	□□□□□ -1.91
YPK3	YBR028C	YPR011C	Q12251	326 aa		3.09	□□□□□ -1.91
YPK3	YBR028C	CFT1	Q06632	1357 aa	Known RBP	3.09	□□□□□ -1.92
YPK3	YBR028C	KSS1	P14681	368 aa		3.08	□□□□□ -1.92
YPK3	YBR028C	PPH21	P23594	369 aa		3.08	□□□□□ -1.92
YPK3	YBR028C	SNZ1	Q03148	297 aa		3.08	□□□□□ -1.92
YPK3	YBR028C	SMD2	Q06217	110 aa	Known RBP	3.08	□□□□□ -1.92
YPK3	YBR028C	YPR147C	Q06522	304 aa	Known RBP	3.08	□□□□□ -1.92
YPK3	YBR028C	YOR268C	Q08734	132 aa		3.08	□□□□□ -1.92
YPK3	YBR028C	YCT1	Q12235	531 aa		3.08	□□□□□ -1.92
YPK3	YBR028C	YPR096C	O13587	100 aa		3.08	□□□□□ -1.92
YPK3	YBR028C	RAD10	P06838	210 aa		3.08	□□□□□ -1.92
YPK3	YBR028C	RSA4	P25382	515 aa	Known RBP	3.08	□□□□□ -1.92
YPK3	YBR028C	ASF2	P32448	525 aa	Predicted RBP	3.08	□□□□□ -1.92
YPK3	YBR028C	YJR079W	P47126	109 aa		3.08	□□□□□ -1.92
YPK3	YBR028C	MRH4	P53166	561 aa		3.08	□□□□□ -1.92
YPK3	YBR028C	YBL008W-A	Q3E821	79 aa		3.08	□□□□□ -1.92
YPK3	YBR028C	MAL32	P38158	584 aa		3.07	□□□□□ -1.92
YPK3	YBR028C	LDB7	P38210	180 aa		3.07	□□□□□ -1.92
YPK3	YBR028C	SIP3	P38717	1229 aa		3.07	□□□□□ -1.92
YPK3	YBR028C	THO1	P40040	218 aa	Known RBP	3.07	□□□□□ -1.92
YPK3	YBR028C	EFM5	P53200	248 aa	Known RBP	3.07	□□□□□ -1.92
YPK3	YBR028C	MAL12	P53341	584 aa		3.07	□□□□□ -1.92
YPK3	YBR028C	SNZ2	P53824	298 aa		3.07	□□□□□ -1.92
YPK3	YBR028C	MYO5	Q04439	1219 aa	Known RBP	3.07	□□□□□ -1.92
YPK3	YBR028C	RPO26	P20435	155 aa		3.06	□□□□□ -1.92
YPK3	YBR028C	MGM101	P32787	269 aa	Known RBP	3.06	□□□□□ -1.92
YPK3	YBR028C	YER188W	P40103	239 aa		3.06	□□□□□ -1.92
YPK3	YBR028C	SSU72	P53538	206 aa	Predicted RBP	3.06	□□□□□ -1.92
YPK3	YBR028C	MRPL50	P53724	139 aa		3.06	□□□□□ -1.92
YPK3	YBR028C	SPG4	Q04438	115 aa		3.06	□□□□□ -1.92
YPK3	YBR028C	SSQ1	Q05931	657 aa	Predicted RBP	3.06	□□□□□ -1.92
YPK3	YBR028C	GEP5	Q12393	293 aa		3.06	□□□□□ -1.92
YPK3	YBR028C	YCR016W	P25617	290 aa	Known RBP	3.05	□□□□□ -1.92
YPK3	YBR028C	RPS5	P26783	225 aa	Known RBP	3.05	□□□□□ -1.92
YPK3	YBR028C	RME1	P32338	300 aa	Known RBP	3.05	□□□□□ -1.92
YPK3	YBR028C	RNP1	P32385	249 aa		3.05	□□□□□ -1.92
YPK3	YBR028C	BMH2	P34730	273 aa	Known RBP	3.05	□□□□□ -1.92
YPK3	YBR028C	ECM4	P36156	370 aa		3.05	□□□□□ -1.92
YPK3	YBR028C	RTR1	P40084	226 aa	Predicted RBP	3.05	□□□□□ -1.92
YPK3	YBR028C	MSS2	P40990	351 aa		3.05	□□□□□ -1.92
YPK3	YBR028C	SYF2	P53277	215 aa	Predicted RBP	3.05	□□□□□ -1.92
YPK3	YBR028C	PGA2	P53903	129 aa		3.05	□□□□□ -1.92
YPK3	YBR028C	KRE28	Q04431	385 aa		3.05	□□□□□ -1.92
YPK3	YBR028C	RRP40	Q08285	240 aa	Known RBP	3.05	□□□□□ -1.92
YPK3	YBR028C	SWI1	P09547	1314 aa		3.05	□□□□□ -1.92
YPK3	YBR028C	MATALPHA1	P0CY06	175 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	HMLALPHA1	P0CY07	175 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	SGE1	P33335	543 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	FZO1	P38297	855 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	YMR114C	Q04471	368 aa	Known RBP	3.04	□□□□□ -1.92
YPK3	YBR028C	YLR283W	Q05867	314 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	RRS1	Q08746	203 aa	Known RBP	3.04	□□□□□ -1.92
YPK3	YBR028C	PST1	Q12355	444 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	EMP46	Q12396	444 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	GIS3	Q12418	502 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	ARG80	P07249	177 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	YKL075C	P36083	450 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	GON7	P46984	123 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	CAB4	P53332	305 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	YNL247W	P53852	767 aa	Known RBP	3.04	□□□□□ -1.92
YPK3	YBR028C	MRPS17	Q03246	237 aa	Predicted RBP	3.04	□□□□□ -1.92
YPK3	YBR028C	YDR124W	Q04608	324 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	YLR179C	Q06252	201 aa	Known RBP	3.04	□□□□□ -1.92
YPK3	YBR028C	SLD7	Q08457	257 aa		3.04	□□□□□ -1.92
YPK3	YBR028C	SYC1	Q08553	188 aa	Predicted RBP	3.04	□□□□□ -1.92
YPK3	YBR028C	SNU23	Q12368	194 aa	Predicted RBP	3.04	□□□□□ -1.92
YPK3	YBR028C	CDC36	P06100	191 aa	Predicted RBP	3.03	□□□□□ -1.92
YPK3	YBR028C	SEC22	P22214	214 aa		3.03	□□□□□ -1.92
YPK3	YBR028C	YKR032W	P36127	104 aa		3.03	□□□□□ -1.92
YPK3	YBR028C	DRE2	P36152	348 aa		3.03	□□□□□ -1.92
YPK3	YBR028C	YHB1	P39676	399 aa	Known RBP	3.03	□□□□□ -1.92
YPK3	YBR028C	YER085C	P40058	173 aa		3.03	□□□□□ -1.92
YPK3	YBR028C	YRB2	P40517	327 aa		3.03	□□□□□ -1.92
YPK3	YBR028C	DIA1	P54005	336 aa		3.03	□□□□□ -1.92
YPK3	YBR028C	RHO3	Q00245	231 aa	Known RBP	3.03	□□□□□ -1.92
YPK3	YBR028C	GOT1	Q03554	138 aa		3.03	□□□□□ -1.92
YPK3	YBR028C	YOR186W	Q08560	144 aa		3.03	□□□□□ -1.92
YPK3	YBR028C	IKI3	Q06706	1349 aa	Known RBP	3.02	□□□□□ -1.93
YPK3	YBR028C	SGA1	P08019	549 aa		3.02	□□□□□ -1.93
YPK3	YBR028C	DPM1	P14020	267 aa	Known RBP	3.02	□□□□□ -1.93
YPK3	YBR028C	YCR102C	P25608	368 aa		3.02	□□□□□ -1.93
YPK3	YBR028C	SRB4	P32569	687 aa		3.02	□□□□□ -1.93
YPK3	YBR028C	YJR141W	P47172	347 aa	Predicted RBP	3.02	□□□□□ -1.93
YPK3	YBR028C	RSM10	Q03201	203 aa		3.02	□□□□□ -1.93
YPK3	YBR028C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
YPK3	YBR028C	MIX17	Q03667	156 aa		3.01	□□□□□ -1.93
YPK3	YBR028C	SEI1	Q06058	285 aa		3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms