RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W SPO73P40031 143 aa1.95□□□□□ -2.1
NUP170YBL079W AAH1P53909 347 aa1.95□□□□□ -2.1
NUP170YBL079W ISU1Q03020 165 aa1.95□□□□□ -2.1
NUP170YBL079W GEP3Q08622 556 aa1.95□□□□□ -2.1
NUP170YBL079W ALG6Q12001 544 aaKnown RBP1.95□□□□□ -2.1
NUP170YBL079W PWP1P21304 576 aaKnown RBP1.95□□□□□ -2.1
NUP170YBL079W IFM1P25038 676 aa1.95□□□□□ -2.1
NUP170YBL079W FUN26P31381 517 aa1.95□□□□□ -2.1
NUP170YBL079W MRP20P32387 263 aa1.95□□□□□ -2.1
NUP170YBL079W MSS1P32559 526 aaPredicted RBP1.95□□□□□ -2.1
NUP170YBL079W PTR2P32901 601 aa1.95□□□□□ -2.1
NUP170YBL079W YUH1P35127 236 aa1.95□□□□□ -2.1
NUP170YBL079W VMA22P38784 181 aa1.95□□□□□ -2.1
NUP170YBL079W GZF3P42944 551 aaKnown RBP1.95□□□□□ -2.1
NUP170YBL079W CDH1P53197 566 aa1.95□□□□□ -2.1
NUP170YBL079W BUD9P53226 547 aa1.95□□□□□ -2.1
NUP170YBL079W YAP1802P53309 568 aa1.95□□□□□ -2.1
NUP170YBL079W HBN1Q96VH4 193 aa1.95□□□□□ -2.1
NUP170YBL079W RPL25P04456 142 aaKnown RBP1.95□□□□□ -2.1
NUP170YBL079W CDC23P16522 626 aa1.95□□□□□ -2.1
NUP170YBL079W MRPL6P32904 214 aa1.95□□□□□ -2.1
NUP170YBL079W NTC20P38302 140 aaPredicted RBP1.95□□□□□ -2.1
NUP170YBL079W CUE1P38428 203 aa1.95□□□□□ -2.1
NUP170YBL079W SDP1P40479 209 aa1.95□□□□□ -2.1
NUP170YBL079W GLR1P41921 483 aaKnown RBP1.95□□□□□ -2.1
NUP170YBL079W TAX4P47030 604 aa1.95□□□□□ -2.1
NUP170YBL079W NSA1P53136 463 aaPredicted RBP1.95□□□□□ -2.1
NUP170YBL079W USE1P53146 245 aa1.95□□□□□ -2.1
NUP170YBL079W YNL033WP53964 284 aa1.95□□□□□ -2.1
NUP170YBL079W YNL019CP53975 284 aa1.95□□□□□ -2.1
NUP170YBL079W HFD1Q04458 532 aa1.95□□□□□ -2.1
NUP170YBL079W RTT103Q05543 409 aa1.95□□□□□ -2.1
NUP170YBL079W HOR7Q05827 59 aa1.95□□□□□ -2.1
NUP170YBL079W YLR281CQ05863 155 aa1.95□□□□□ -2.1
NUP170YBL079W CTS2Q06350 511 aa1.95□□□□□ -2.1
NUP170YBL079W BRE4Q07660 1125 aa1.95□□□□□ -2.1
NUP170YBL079W RFM1Q12192 310 aa1.95□□□□□ -2.1
NUP170YBL079W NPC2Q12408 173 aa1.95□□□□□ -2.1
NUP170YBL079W YCR100CP25606 316 aa1.94□□□□□ -2.1
NUP170YBL079W PRP21P32524 280 aaPredicted RBP1.94□□□□□ -2.1
NUP170YBL079W YBR285WP38354 144 aa1.94□□□□□ -2.1
NUP170YBL079W ECM34P38728 170 aa1.94□□□□□ -2.1
NUP170YBL079W PIC2P40035 300 aa1.94□□□□□ -2.1
NUP170YBL079W YFL066CP43538 392 aa1.94□□□□□ -2.1
NUP170YBL079W SUT1P53032 299 aaKnown RBP1.94□□□□□ -2.1
NUP170YBL079W RNH202Q05635 350 aa1.94□□□□□ -2.1
NUP170YBL079W ADK1P07170 222 aaKnown RBP1.94□□□□□ -2.1
NUP170YBL079W SDS22P36047 338 aa1.94□□□□□ -2.1
NUP170YBL079W CWC23P52868 283 aaPredicted RBP1.94□□□□□ -2.1
NUP170YBL079W BUD17P53727 317 aa1.94□□□□□ -2.1
NUP170YBL079W TPS1Q00764 495 aaKnown RBP1.94□□□□□ -2.1
NUP170YBL079W GPN3Q06543 272 aa1.94□□□□□ -2.1
NUP170YBL079W YPD1Q07688 167 aa1.94□□□□□ -2.1
NUP170YBL079W APC9Q12107 265 aa1.94□□□□□ -2.1
NUP170YBL079W MCT1Q12283 360 aa1.94□□□□□ -2.1
NUP170YBL079W MRPL23Q12487 163 aaPredicted RBP1.94□□□□□ -2.1
NUP170YBL079W YPR010C-AA5Z2X5 72 aa1.94□□□□□ -2.1
NUP170YBL079W MES1P00958 751 aaKnown RBP1.94□□□□□ -2.1
NUP170YBL079W NFT1P0CE68 1218 aa1.94□□□□□ -2.1
NUP170YBL079W OLE1P21147 510 aaKnown RBP1.94□□□□□ -2.1
NUP170YBL079W YCR061WP25639 631 aa1.94□□□□□ -2.1
NUP170YBL079W FUN19P28003 413 aaPredicted RBP1.94□□□□□ -2.1
NUP170YBL079W PDB1P32473 366 aaKnown RBP1.94□□□□□ -2.1
NUP170YBL079W RPC34P32910 317 aa1.94□□□□□ -2.1
NUP170YBL079W SHE2P36068 246 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
NUP170YBL079W YHR035WP38769 630 aa1.94□□□□□ -2.1
NUP170YBL079W YHR138CP38841 114 aaPredicted RBP1.94□□□□□ -2.1
NUP170YBL079W LSM4P40070 187 aaKnown RBP1.94□□□□□ -2.1
NUP170YBL079W MSS11Q03825 758 aa1.94□□□□□ -2.1
NUP170YBL079W YDR179W-AQ03983 463 aa1.94□□□□□ -2.1
NUP170YBL079W TPO3Q06451 622 aa1.94□□□□□ -2.1
NUP170YBL079W YOR289WQ12012 251 aaPredicted RBP1.94□□□□□ -2.1
NUP170YBL079W RKI1Q12189 258 aa1.94□□□□□ -2.1
NUP170YBL079W PRM4Q12498 284 aa1.94□□□□□ -2.1
NUP170YBL079W DCP1Q12517 231 aaPredicted RBP1.94□□□□□ -2.1
NUP170YBL079W PHO4P07270 312 aaKnown RBP1.94□□□□□ -2.1
NUP170YBL079W MATALPHA1P0CY06 175 aa1.94□□□□□ -2.1
NUP170YBL079W HMLALPHA1P0CY07 175 aa1.94□□□□□ -2.1
NUP170YBL079W YMR31P19955 123 aa1.94□□□□□ -2.1
NUP170YBL079W GSH1P32477 678 aa1.94□□□□□ -2.1
NUP170YBL079W RIB7P33312 244 aa1.94□□□□□ -2.1
NUP170YBL079W MRPL16P38064 232 aa1.94□□□□□ -2.1
NUP170YBL079W SWM2P40342 146 aa1.94□□□□□ -2.1
NUP170YBL079W NUP49Q02199 472 aa1.94□□□□□ -2.1
NUP170YBL079W MEH1Q02205 184 aa1.94□□□□□ -2.1
NUP170YBL079W BTS1Q12051 335 aa1.94□□□□□ -2.1
NUP170YBL079W FRE8Q12209 686 aa1.94□□□□□ -2.1
NUP170YBL079W MED4Q12343 284 aa1.94□□□□□ -2.1
NUP170YBL079W GAL1P04385 528 aa1.93□□□□□ -2.1
NUP170YBL079W HXT2P23585 541 aa1.93□□□□□ -2.1
NUP170YBL079W YOX1P34161 385 aa1.93□□□□□ -2.1
NUP170YBL079W RTC2P38279 296 aa1.93□□□□□ -2.1
NUP170YBL079W YIL169CP40442 995 aa1.93□□□□□ -2.1
NUP170YBL079W ERJ5P43613 295 aaPredicted RBP1.93□□□□□ -2.1
NUP170YBL079W GPI11Q06636 219 aa1.93□□□□□ -2.1
NUP170YBL079W MSH5Q12175 901 aa1.93□□□□□ -2.1
NUP170YBL079W RTN2Q12443 393 aa1.93□□□□□ -2.1
NUP170YBL079W VMA6P32366 345 aaKnown RBP1.93□□□□□ -2.1
NUP170YBL079W MID1P41821 548 aa1.93□□□□□ -2.1
NUP170YBL079W RPL9BP51401 191 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms