RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 ACER1Q8TDN7 264 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 RMDN1Q96DB5 314 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 SPATC1LQ9H0A9 340 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 MUC3BQ9H195 1237 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 MYPNQ86TC9 1320 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 PP2D1A8MPX8 630 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 HMBSP08397 361 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 HARS2P49590 506 aaKnown RBP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 CTCFP49711 727 aaPredicted RBP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 TAF6P49848 677 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 SNRPFP62306 86 aaKnown RBP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 FKBP1AP62942 108 aaKnown RBP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 AP1B1Q10567 949 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 NOGQ13253 232 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 LMBRD2Q68DH5 695 aaPredicted RBP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 CYP4F22Q6NT55 531 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 TAS2R42Q7RTR8 314 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 SCFD1Q8WVM8 642 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 PHF20Q9BVI0 1012 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 XPNPEP3Q9NQH7 507 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 TMX2Q9Y320 296 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 GOLGA8KD6RF30 607 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 NCAM2O15394 837 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 ZRANB2O95218 330 aaKnown RBP eCLIP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 MT-ND3P03897 115 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 DDX5P17844 614 aaKnown RBP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 ACOT2P49753 483 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 TPI1P60174 286 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 STARD3Q14849 445 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 LLGL1Q15334 1064 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 TRIP13Q15645 432 aaPredicted RBP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 ELF2Q15723 593 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 TTC19Q6DKK2 380 aaPredicted RBP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 CENPKQ9BS16 269 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 TRAIPQ9BWF2 469 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 PCSK1NQ9UHG2 260 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 UBQLN1Q9UMX0 589 aaKnown RBP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 PPFIA2O75334 1257 aa9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 TMCC1O94876 653 aa9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 CLTAP09496 248 aa9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 PRCPP42785 496 aa9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 MNAT1P51948 309 aa9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 IRX4P78413 519 aa9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 IFNLR1Q8IU57 520 aaPredicted RBP9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 DNERQ8NFT8 737 aa9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 AKT1S1Q96B36 256 aa9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 SDCCAG3Q96C92 435 aa9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 PARVAQ9NVD7 372 aa9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 ADAMTS1Q9UHI8 967 aa9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.9□□□□□ -0.83
CACNA1D-230ENST00000640483 TRIM49BA6NDI0 452 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 PPP1R12AO14974 1030 aaPredicted RBP9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 EIF3DO15371 548 aaKnown RBP eCLIP9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 MSCO60682 206 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 YWHAHQ04917 246 aaPredicted RBP9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 DRAP1Q14919 205 aaPredicted RBP9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 TSGA10IPQ3SY00 556 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 TRIM67Q6ZTA4 783 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 EXT2Q93063 718 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 DRC3Q9H069 523 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 EPB41L4AQ9HCS5 686 aaPredicted RBP9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 SPTLC3Q9NUV7 552 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 FAM47E-STBD1D6RA91 191 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 DSG3P32926 999 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 ACADSBP45954 432 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 SLC26A2P50443 739 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 PLTPP55058 493 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 NFIAQ12857 509 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 HVCN1Q96D96 273 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 NUP85Q9BW27 656 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 TRIM54Q9BYV2 358 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 BCL9O00512 1426 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 ARHGAP42A6NI28 874 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 WNT10BO00744 389 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 PDGFRBP09619 1106 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 U2AF2P26368 475 aaKnown RBP eCLIP9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 IL9RQ01113 521 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 APBA1Q02410 837 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 PPIL2Q13356 520 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 NCOA4Q13772 614 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 SLMAPQ14BN4 828 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 SLC35F6Q8N357 371 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 ZNF564Q8TBZ8 553 aaPredicted RBP9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 PYROXD1Q8WU10 500 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 CABS1Q96KC9 395 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 FBXO28Q9NVF7 368 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 NPHP3-ACAD11A0A0J9YXS1 232 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 LGALS16A8MUM7 142 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 RGMBQ6NW40 437 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 VSTM4Q8IW00 320 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 TMCO5AQ8N6Q1 288 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 ASAP3Q8TDY4 903 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 SPATA17Q96L03 361 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 LRGUKQ96M69 825 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 GDAP1L1Q96MZ0 367 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 PANX2Q96RD6 677 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 OLFML3Q9NRN5 406 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 TTC36A6NLP5 189 aa9.89□□□□□ -0.83
CACNA1D-230ENST00000640483 TRIM49P0CI25 452 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms