RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 PRPF4O43172 522 aaKnown RBP eCLIP17.93■□□□□ 0.46
LITAF-209ENST00000571688 SPOPO43791 374 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 SESN3P58005 492 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 RPS8P62241 208 aaKnown RBP17.93■□□□□ 0.46
LITAF-209ENST00000571688 DYNC1I2Q13409 638 aaKnown RBP17.93■□□□□ 0.46
LITAF-209ENST00000571688 SPARCL1Q14515 664 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 PDK4Q16654 411 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 SLC45A4Q5BKX6 768 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 SCG3Q8WXD2 468 aaKnown RBP17.93■□□□□ 0.46
LITAF-209ENST00000571688 PSPC1Q8WXF1 523 aaKnown RBP17.93■□□□□ 0.46
LITAF-209ENST00000571688 CCDC77Q9BR77 488 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 PSTPIP2Q9H939 334 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 UBN1Q9NPG3 1134 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 CYLDQ9NQC7 956 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 TAF1LQ8IZX4 1826 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 EIF3DO15371 548 aaKnown RBP eCLIP17.92■□□□□ 0.46
LITAF-209ENST00000571688 TBCAO75347 108 aaKnown RBP17.92■□□□□ 0.46
LITAF-209ENST00000571688 TRIM49P0CI25 452 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 TRIM49CP0CI26 452 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 SLC18A1P54219 525 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 MYL7Q01449 175 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 TMED2Q15363 201 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 CCDC6Q16204 474 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 TRABD2AQ86V40 505 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 CCDC125Q86Z20 511 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 RPUSD2Q8IZ73 545 aaKnown RBP17.92■□□□□ 0.46
LITAF-209ENST00000571688 LRRC47Q8N1G4 583 aaKnown RBP17.92■□□□□ 0.46
LITAF-209ENST00000571688 WDR66Q8TBY9 1149 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 GATA6Q92908 595 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 PWWP2AQ96N64 755 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 RTFDC1Q9BY42 306 aaPredicted RBP17.92■□□□□ 0.46
LITAF-209ENST00000571688 GRID1Q9ULK0 1009 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 PLIN4Q96Q06 1357 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 A0A1W2PRG0 241 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 KCNA3P22001 575 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 CDR2Q01850 454 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 RELL1Q8IUW5 271 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 ERMNQ8TAM6 284 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 LMO3Q8TAP4 145 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 CHST7Q9NS84 486 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 ZFP69BQ9UJL9 534 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 ANAPC5Q9UJX4 755 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 ZNF652Q9Y2D9 606 aa17.92■□□□□ 0.46
LITAF-209ENST00000571688 SBF2Q86WG5 1849 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 ATMINO43313 823 aaPredicted RBP17.91■□□□□ 0.46
LITAF-209ENST00000571688 SPAG7O75391 227 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 TJP3O95049 919 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 CACNA2D1P54289 1103 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 RCN1Q15293 331 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 ZNF804AQ7Z570 1209 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 SESTD1Q86VW0 696 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 ETNPPLQ8TBG4 499 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 ZNF564Q8TBZ8 553 aaPredicted RBP17.91■□□□□ 0.46
LITAF-209ENST00000571688 BTBD6Q96KE9 485 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 CADM1Q9BY67 442 aaKnown RBP17.91■□□□□ 0.46
LITAF-209ENST00000571688 MTMR4Q9NYA4 1195 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 MAGEA13PA6NCF6 341 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 C2CD2LO14523 706 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 ATF2P15336 505 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 MAN1A1P33908 653 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 NR1H3Q13133 447 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 ZNF746Q6NUN9 644 aaPredicted RBP17.91■□□□□ 0.46
LITAF-209ENST00000571688 DSTYKQ6XUX3 929 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 PRUNE1Q86TP1 453 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 RBM41Q96IZ5 413 aaKnown RBP17.91■□□□□ 0.46
LITAF-209ENST00000571688 FAM192AQ9GZU8 254 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 ZCWPW1Q9H0M4 648 aa17.91■□□□□ 0.46
LITAF-209ENST00000571688 BCRP11274 1271 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 GAP43P17677 238 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 ZNF543Q08ER8 600 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 COG2Q14746 738 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 RBM26Q5T8P6 1007 aaKnown RBP17.9■□□□□ 0.46
LITAF-209ENST00000571688 LRRC74BQ6ZQY2 392 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 NLRP9Q7RTR0 991 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 AZIN2Q96A70 460 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 PCDHB18PQ96TA0 734 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 LDHCP07864 332 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 ABHD2P08910 425 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 POLD1P28340 1107 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 GCAP28676 217 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 SLC34A1Q06495 639 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 TRIP13Q15645 432 aaPredicted RBP17.9■□□□□ 0.46
LITAF-209ENST00000571688 ZC3H12AQ5D1E8 599 aaKnown RBP17.9■□□□□ 0.46
LITAF-209ENST00000571688 BRINP3Q76B58 766 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 CLNKQ7Z7G1 428 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 ZC3H18Q86VM9 953 aaKnown RBP17.9■□□□□ 0.46
LITAF-209ENST00000571688 GRK7Q8WTQ7 553 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 NUP85Q9BW27 656 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 BHMT2Q9H2M3 363 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 DMAC2Q9NW81 257 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 SPATA31A5Q5VU36 1347 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 SPATA31A6Q5VVP1 1343 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 SPATA31A7Q8IWB4 1347 aa17.9■□□□□ 0.46
LITAF-209ENST00000571688 FAM196BA6NMK8 535 aa17.89■□□□□ 0.46
LITAF-209ENST00000571688 TOM1O60784 492 aa17.89■□□□□ 0.46
LITAF-209ENST00000571688 KRT36O76013 467 aa17.89■□□□□ 0.46
LITAF-209ENST00000571688 CYP1A2P05177 515 aa17.89■□□□□ 0.46
LITAF-209ENST00000571688 PYGLP06737 847 aa17.89■□□□□ 0.46
LITAF-209ENST00000571688 NMT1P30419 496 aaKnown RBP17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms