RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PAAF1Q9BRP4 392 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 BACH2Q9BYV9 841 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CDT1Q9H211 546 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 MAN1C1Q9NR34 630 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TOPORSQ9NS56 1045 aaPredicted RBP18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ODF2LQ9ULJ1 636 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 MORC2Q9Y6X9 1032 aaPredicted RBP18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 H0YCG3 227 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 PLA2G4BP0C869 781 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 LIG1P18858 919 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 SMTNP53814 917 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TMC5Q6UXY8 1006 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ZPBP2Q6X784 338 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TDRD5Q8NAT2 981 aaKnown RBP18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ASIC4Q96FT7 647 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CDK5RAP3Q96JB5 506 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TTPALQ9BTX7 342 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CXCL16Q9H2A7 254 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ZDHHC7Q9NXF8 308 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 SORCS3Q9UPU3 1222 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 WDFY4Q6ZS81 3184 aa18.75■□□□□ 0.59
MAP1LC3B-208ENST00000570189 MYH15Q9Y2K3 1946 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CASTOR2A6NHX0 329 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TOM1L1O75674 476 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 MAPTP10636 758 aaKnown RBP18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 KCNE1P15382 129 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 NCKAP1LP55160 1127 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ZNF568Q3ZCX4 644 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ARSHQ5FYA8 562 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 RTP2Q5QGT7 225 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 KANK3Q6NY19 840 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 MPZL3Q6UWV2 235 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CCDC149Q6ZUS6 474 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 OTOP3Q7RTS5 596 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 RIN2Q8WYP3 895 aaPredicted RBP18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 FAM122AQ96E09 287 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CALML4Q96GE6 196 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CCDC94Q9BW85 323 aaPredicted RBP18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TARS2Q9BW92 718 aaKnown RBP18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 SLC38A7Q9NVC3 462 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 LARSQ9P2J5 1176 aaKnown RBP18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 GDAQ9Y2T3 454 aa18.74■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ZDBF2Q9HCK1 2354 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 SMIM28A0A1B0GU29 152 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 SLC16A4O15374 487 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TGM5O43548 720 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 WEE2P0C1S8 567 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 UBA7P41226 1012 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ZNF131P52739 623 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 YARSP54577 528 aaKnown RBP18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 MTMR3Q13615 1198 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 UPP1Q16831 310 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 DCLRE1AQ6PJP8 1040 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 LNX1Q8TBB1 728 aaPredicted RBP18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 B3GALT6Q96L58 329 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 SNX27Q96L92 541 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CCSER1Q9C0I3 900 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 WDR6Q9NNW5 1121 aaKnown RBP18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 BLOC1S4Q9NUP1 217 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CNTN3Q9P232 1028 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CACNG4Q9UBN1 327 aa18.73■□□□□ 0.59
MAP1LC3B-208ENST00000570189 POU2F2P09086 479 aa18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 FGFR3P22607 806 aa18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 STRN3Q13033 797 aa18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 SF3A1Q15459 793 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 FAM171A1Q5VUB5 890 aa18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CD300LGQ6UXG3 332 aa18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 RTL10Q7L3V2 364 aa18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CEP120Q8N960 986 aa18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 RABGGTAQ92696 567 aa18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ZNF707Q96C28 371 aaPredicted RBP18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ACSF2Q96CM8 615 aaPredicted RBP18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 DDX27Q96GQ7 796 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CLSTN3Q9BQT9 956 aa18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TSHZ2Q9NRE2 1034 aa18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 FBXW11Q9UKB1 542 aa18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.72■□□□□ 0.59
MAP1LC3B-208ENST00000570189 CCDC195A0A1B0GUA6 201 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 SPDYE4A6NLX3 237 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 SFI1A8K8P3 1242 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 HOXA9P31269 272 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ABCD1P33897 745 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 MCL1Q07820 350 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 NOLC1Q14978 699 aaKnown RBP eCLIP18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 PTPAQ15257 358 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ZRSR1Q15695 479 aaKnown RBP18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 PSMD5Q16401 504 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 FBXL6Q8N531 539 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 KREMEN2Q8NCW0 462 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 FEZF2Q8TBJ5 459 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 LRRC15Q8TF66 581 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 STAMQ92783 540 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 PBXIP1Q96AQ6 731 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 ACAP3Q96P50 834 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 DOCK6Q96HP0 2047 aa18.71■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TRAPPC3O43617 180 aa18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 PIGRP01833 764 aa18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SP100P23497 879 aaPredicted RBP18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 CLCNKBP51801 687 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms