RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 HIC1Q14526 733 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 MEA1Q16626 185 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 FOXR1Q6PIV2 292 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 CYP26C1Q6V0L0 522 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 PPP1R16BQ96T49 567 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 CHP1Q99653 195 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 GANQ9H2C0 597 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 SPC25Q9HBM1 224 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 NLRC4Q9NPP4 1024 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 PLAGL2Q9UPG8 496 aa19.11■□□□□ 0.65
GDE1-203ENST00000564172 KPNA6O60684 536 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 SEC31AO94979 1220 aaKnown RBP19.1■□□□□ 0.65
GDE1-203ENST00000564172 LDHAP00338 332 aaKnown RBP19.1■□□□□ 0.65
GDE1-203ENST00000564172 GNRH1P01148 92 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 IQCF3P0C7M6 154 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 NLRP11P59045 1033 aaKnown RBP19.1■□□□□ 0.65
GDE1-203ENST00000564172 MTF1Q14872 753 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 LRRC31Q6UY01 552 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 RAD9BQ6WBX8 426 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 RRAGAQ7L523 313 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 TMC2Q8TDI7 906 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 CCDC127Q96BQ5 260 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 MSTO1Q9BUK6 570 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 TRIM6Q9C030 488 aaPredicted RBP19.1■□□□□ 0.65
GDE1-203ENST00000564172 HNRNPH3P31942 346 aaKnown RBP19.1■□□□□ 0.65
GDE1-203ENST00000564172 MATR3P43243 847 aaKnown RBP eCLIP19.1■□□□□ 0.65
GDE1-203ENST00000564172 GCLMP48507 274 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 ACOT2P49753 483 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 NKX3-2P78367 333 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 KLHDC7AQ5VTJ3 777 aa19.1■□□□□ 0.65
GDE1-203ENST00000564172 CRELD2Q6UXH1 353 aaPredicted RBP19.1■□□□□ 0.65
GDE1-203ENST00000564172 TRMT1Q9NXH9 659 aaKnown RBP19.1■□□□□ 0.65
GDE1-203ENST00000564172 LRRC53A6NM62 1247 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 HMGCRP04035 888 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 UCHL3P15374 230 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 GPC3P51654 580 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 RWDD2BP57060 319 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 MYL7Q01449 175 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 RAET1EQ8TD07 263 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 TCHPQ9BT92 498 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 SIX2Q9NPC8 291 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 ZNHIT6Q9NWK9 470 aaKnown RBP19.09■□□□□ 0.65
GDE1-203ENST00000564172 SMIM35A0A1B0GVV1 85 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 LRRIQ3A6PVS8 624 aaPredicted RBP19.09■□□□□ 0.65
GDE1-203ENST00000564172 P4HA2O15460 535 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 B4GALT5O43286 388 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 FKTNO75072 461 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 N4BP1O75113 896 aaKnown RBP19.09■□□□□ 0.65
GDE1-203ENST00000564172 ADAMTS4O75173 837 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 CSDE1O75534 798 aaKnown RBP19.09■□□□□ 0.65
GDE1-203ENST00000564172 ENPEPQ07075 957 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 PRPF4BQ13523 1007 aaKnown RBP19.09■□□□□ 0.65
GDE1-203ENST00000564172 FAM187BQ17R55 369 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 MAP3K21Q5TCX8 1036 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 TTC19Q6DKK2 380 aaPredicted RBP19.09■□□□□ 0.65
GDE1-203ENST00000564172 PDXDC1Q6P996 788 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 TRIM65Q6PJ69 517 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 TSHZ1Q6ZSZ6 1077 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 TOGARAM2Q6ZUX3 1019 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 USP37Q86T82 979 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 ZNF296Q8WUU4 475 aaPredicted RBP19.09■□□□□ 0.65
GDE1-203ENST00000564172 NLRP7Q8WX94 980 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 POP1Q99575 1024 aaKnown RBP19.09■□□□□ 0.65
GDE1-203ENST00000564172 XPNPEP3Q9NQH7 507 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 PRMT7Q9NVM4 692 aaPredicted RBP19.09■□□□□ 0.65
GDE1-203ENST00000564172 HDAC6Q9UBN7 1215 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 RPS6KL1Q9Y6S9 549 aa19.09■□□□□ 0.65
GDE1-203ENST00000564172 ABLIM1O14639 778 aa19.08■□□□□ 0.65
GDE1-203ENST00000564172 CXCL17Q6UXB2 119 aa19.08■□□□□ 0.65
GDE1-203ENST00000564172 ZNF410Q86VK4 478 aa19.08■□□□□ 0.65
GDE1-203ENST00000564172 ZNF513Q8N8E2 541 aaPredicted RBP19.08■□□□□ 0.65
GDE1-203ENST00000564172 PXYLP1Q8TE99 480 aa19.08■□□□□ 0.65
GDE1-203ENST00000564172 MTG1Q9BT17 334 aaPredicted RBP19.08■□□□□ 0.65
GDE1-203ENST00000564172 TMEM117Q9H0C3 514 aa19.08■□□□□ 0.65
GDE1-203ENST00000564172 FAM49AQ9H0Q0 323 aaPredicted RBP19.08■□□□□ 0.65
GDE1-203ENST00000564172 PTPRHQ9HD43 1115 aa19.08■□□□□ 0.65
GDE1-203ENST00000564172 FBXL5Q9UKA1 691 aa19.08■□□□□ 0.65
GDE1-203ENST00000564172 PMM2O15305 246 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 TREHO43280 583 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 ZEB2O60315 1214 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 CYP2C9P11712 490 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 PROZP22891 400 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 MCL1Q07820 350 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 ZBTB41Q5SVQ8 909 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 ATF7IP2Q5U623 682 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 ZBTB33Q86T24 672 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 LRRN4CLQ8ND94 238 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 LMO3Q8TAP4 145 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 SAGE1Q9NXZ1 904 aa19.08■□□□□ 0.64
GDE1-203ENST00000564172 H3BQF6 201 aa19.07■□□□□ 0.64
GDE1-203ENST00000564172 DLATP10515 647 aaKnown RBP19.07■□□□□ 0.64
GDE1-203ENST00000564172 HARSP12081 509 aaKnown RBP19.07■□□□□ 0.64
GDE1-203ENST00000564172 HOXC8P31273 242 aa19.07■□□□□ 0.64
GDE1-203ENST00000564172 MXI1P50539 228 aa19.07■□□□□ 0.64
GDE1-203ENST00000564172 ZNF200P98182 395 aaPredicted RBP19.07■□□□□ 0.64
GDE1-203ENST00000564172 CDK17Q00537 523 aa19.07■□□□□ 0.64
GDE1-203ENST00000564172 CETN1Q12798 172 aa19.07■□□□□ 0.64
GDE1-203ENST00000564172 PSMD6Q15008 389 aa19.07■□□□□ 0.64
GDE1-203ENST00000564172 AMHR2Q16671 573 aa19.07■□□□□ 0.64
GDE1-203ENST00000564172 RUFY4Q6ZNE9 571 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms