RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 SRBD1Q8N5C6 995 aaKnown RBP9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 SYTL5Q8TDW5 730 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 SCFD2Q8WU76 684 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 CCDC12Q8WUD4 166 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 TMEM40Q8WWA1 233 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 CUL5Q93034 780 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 ZNF274Q96GC6 653 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 RMDN3Q96TC7 470 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 RNF26Q9BY78 433 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 C11orf49Q9H6J7 331 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 SPC25Q9HBM1 224 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 XPNPEP3Q9NQH7 507 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 KIAA1522Q9P206 1035 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 Q9Y3F1 56 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 GCOM1H8Y6P7 765 aaPredicted RBP9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 LRRN2O75325 713 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 CFBP00751 764 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 POLR2MP0CAP2 368 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 TPP2P29144 1249 aaPredicted RBP9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 RAD51AP2Q09MP3 1159 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 TOB2Q14106 344 aaPredicted RBP9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 LRRC41Q15345 812 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 CLEC16AQ2KHT3 1053 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 IQSEC1Q6DN90 963 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 KCNV1Q6PIU1 500 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 ATG4DQ86TL0 474 aaPredicted RBP9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 NT5DC4Q86YG4 428 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 CREG2Q8IUH2 290 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 PCSK9Q8NBP7 692 aaKnown RBP9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 CCDC120Q96HB5 630 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 PAWRQ96IZ0 340 aaKnown RBP9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 SEZ6LQ9BYH1 1024 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 UPF3BQ9BZI7 483 aaKnown RBP9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 GPR62Q9BZJ7 368 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 DUSP15Q9H1R2 295 aaPredicted RBP9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 PXMP2Q9NR77 195 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 RNF114Q9Y508 228 aa9.15□□□□□ -0.94
NSMCE1-205ENST00000563512 BRWD1Q9NSI6 2320 aa9.15□□□□□ -0.95
NSMCE1-205ENST00000563512 PTPRSQ13332 1948 aa9.15□□□□□ -0.95
NSMCE1-205ENST00000563512 NLRC5Q86WI3 1866 aa9.15□□□□□ -0.95
NSMCE1-205ENST00000563512 ESYT2A0FGR8 921 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 CDKL5O76039 1030 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 CPA1P15085 419 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 IFNAR1P17181 557 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 ITGB5P18084 799 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 GJA9P57773 515 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 TNFAIP2Q03169 654 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 SNX17Q15036 470 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 STXBP2Q15833 593 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 PFKFB3Q16875 520 aaPredicted RBP9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 DUSP28Q4G0W2 176 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 PRAMEF19Q5SWL8 479 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 ARHGEF16Q5VV41 709 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 MCTP2Q6DN12 878 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 TAPT1Q6NXT6 567 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 XRRA1Q6P2D8 792 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 CPLX2Q6PUV4 134 aaKnown RBP9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 TLK2Q86UE8 772 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 FBXO16Q8IX29 292 aaPredicted RBP9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 DIS3LQ8TF46 1054 aaKnown RBP9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 PDCD2LQ9BRP1 358 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 UPF2Q9HAU5 1272 aaKnown RBP9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 BARHL2Q9NY43 387 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 COL20A1Q9P218 1284 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 NR2E3Q9Y5X4 410 aa9.14□□□□□ -0.95
NSMCE1-205ENST00000563512 CDH23Q9H251 3354 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 MROH7Q68CQ1 1323 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 STK36Q9NRP7 1315 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 RBAK-RBAKDNI3L0D1 243 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 PRPF3O43395 683 aaKnown RBP9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 CLEC3AO75596 197 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 EIF3JO75822 258 aaKnown RBP9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 CABYRO75952 493 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 UBOX5O94941 541 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 FOSP01100 380 aaPredicted RBP9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 SCG2P13521 617 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 PDIA3P30101 505 aaKnown RBP9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 CCND2P30279 289 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 POLR2BP30876 1174 aaKnown RBP9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 CCNFP41002 786 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 ADCYAP1R1P41586 468 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 RBM25P49756 843 aaKnown RBP9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 CPT1AP50416 773 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 AKAP17AQ02040 695 aaKnown RBP9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 NTRK3Q16288 839 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 GNPTABQ3T906 1256 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 BRDTQ58F21 947 aaPredicted RBP9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 WWC2Q6AWC2 1192 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 HEATR3Q7Z4Q2 680 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 KLHDC9Q8NEP7 349 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 CCDC148Q8NFR7 591 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 SMARCC2Q8TAQ2 1214 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 SPATA32Q96LK8 384 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 PSTPIP2Q9H939 334 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 PDRG1Q9NUG6 133 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 DUSP13Q9UII6 198 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 NAP1L2Q9ULW6 460 aaPredicted RBP9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 TTC3P53804 2025 aa9.13□□□□□ -0.95
NSMCE1-205ENST00000563512 CHD7Q9P2D1 2997 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms