RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 AEBP2Q6ZN18 517 aaPredicted RBP31.85■■■□□ 2.69
NSMCE1-205ENST00000563512 CHIC1Q5VXU3 224 aa31■■■□□ 2.55
NSMCE1-205ENST00000563512 PHF23Q9BUL5 403 aaPredicted RBP27.18■■□□□ 1.94
NSMCE1-205ENST00000563512 SENP3Q9H4L4 574 aaPredicted RBP27.18■■□□□ 1.94
NSMCE1-205ENST00000563512 FOXD1Q16676 465 aa25.17■■□□□ 1.62
NSMCE1-205ENST00000563512 PLPPR3Q6T4P5 718 aa25.16■■□□□ 1.62
NSMCE1-205ENST00000563512 ADRA2BP18089 450 aa24.08■■□□□ 1.45
NSMCE1-205ENST00000563512 PPP6R1Q9UPN7 881 aa24.05■■□□□ 1.44
NSMCE1-205ENST00000563512 PIAS4Q8N2W9 510 aaPredicted RBP23.78■■□□□ 1.4
NSMCE1-205ENST00000563512 MSH5O43196 834 aa23.37■■□□□ 1.33
NSMCE1-205ENST00000563512 SCAF1Q9H7N4 1312 aaKnown RBP22.15■■□□□ 1.14
NSMCE1-205ENST00000563512 PPP4R3CPQ6ZMV5 832 aa22.12■■□□□ 1.13
NSMCE1-205ENST00000563512 POTEDQ86YR6 584 aa22.11■■□□□ 1.13
NSMCE1-205ENST00000563512 MAPK8IP2Q13387 824 aaPredicted RBP21.87■■□□□ 1.09
NSMCE1-205ENST00000563512 DMRT2Q9Y5R5 561 aa21.62■■□□□ 1.05
NSMCE1-205ENST00000563512 NCBP3Q53F19 620 aaKnown RBP21.59■■□□□ 1.05
NSMCE1-205ENST00000563512 CNKSR2Q8WXI2 1034 aa21.56■■□□□ 1.04
NSMCE1-205ENST00000563512 KCNA4P22459 653 aa21.38■■□□□ 1.01
NSMCE1-205ENST00000563512 RNF216Q9NWF9 866 aaPredicted RBP21.16■□□□□ 0.98
NSMCE1-205ENST00000563512 NPM3O75607 178 aaKnown RBP21.15■□□□□ 0.98
NSMCE1-205ENST00000563512 HOXD11P31277 338 aaPredicted RBP21.09■□□□□ 0.97
NSMCE1-205ENST00000563512 DCAF8L1A6NGE4 600 aa20.84■□□□□ 0.93
NSMCE1-205ENST00000563512 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
NSMCE1-205ENST00000563512 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
NSMCE1-205ENST00000563512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.83
NSMCE1-205ENST00000563512 SLC4A2P04920 1241 aa19.97■□□□□ 0.79
NSMCE1-205ENST00000563512 RNF39Q9H2S5 420 aa19.94■□□□□ 0.78
NSMCE1-205ENST00000563512 FOXD4L1Q9NU39 408 aa19.77■□□□□ 0.76
NSMCE1-205ENST00000563512 U3KPZ7 1027 aaPredicted RBP19.76■□□□□ 0.75
NSMCE1-205ENST00000563512 C1QBPQ07021 282 aaKnown RBP19.75■□□□□ 0.75
NSMCE1-205ENST00000563512 CACNB1Q02641 598 aaPredicted RBP19.65■□□□□ 0.74
NSMCE1-205ENST00000563512 EHMT2Q96KQ7 1210 aa19.63■□□□□ 0.73
NSMCE1-205ENST00000563512 ZBTB22O15209 634 aa19.61■□□□□ 0.73
NSMCE1-205ENST00000563512 MYCNP04198 464 aaPredicted RBP19.61■□□□□ 0.73
NSMCE1-205ENST00000563512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
NSMCE1-205ENST00000563512 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
NSMCE1-205ENST00000563512 NISCHQ9Y2I1 1504 aa19.5■□□□□ 0.71
NSMCE1-205ENST00000563512 SAMD1Q6SPF0 538 aaPredicted RBP19.47■□□□□ 0.71
NSMCE1-205ENST00000563512 APLP2Q06481 763 aa19.45■□□□□ 0.7
NSMCE1-205ENST00000563512 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
NSMCE1-205ENST00000563512 CAPN15O75808 1086 aa19.3■□□□□ 0.68
NSMCE1-205ENST00000563512 SPINK5Q9NQ38 1064 aaPredicted RBP19.27■□□□□ 0.68
NSMCE1-205ENST00000563512 TRHP20396 242 aaPredicted RBP19.16■□□□□ 0.66
NSMCE1-205ENST00000563512 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
NSMCE1-205ENST00000563512 ATXN8OSP0DMR3 200 aa19.11■□□□□ 0.65
NSMCE1-205ENST00000563512 ATF5Q9Y2D1 282 aaPredicted RBP19■□□□□ 0.63
NSMCE1-205ENST00000563512 DSG3P32926 999 aa18.92■□□□□ 0.62
NSMCE1-205ENST00000563512 ABCB7O75027 752 aa18.88■□□□□ 0.61
NSMCE1-205ENST00000563512 POLA2Q14181 598 aa18.78■□□□□ 0.6
NSMCE1-205ENST00000563512 ZBTB12Q9Y330 459 aaPredicted RBP18.51■□□□□ 0.55
NSMCE1-205ENST00000563512 FBLN2P98095 1184 aa18.38■□□□□ 0.53
NSMCE1-205ENST00000563512 MKRN4PQ13434 485 aaPredicted RBP18.16■□□□□ 0.5
NSMCE1-205ENST00000563512 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
NSMCE1-205ENST00000563512 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
NSMCE1-205ENST00000563512 SPDYE2BA6NHP3 402 aa17.95■□□□□ 0.46
NSMCE1-205ENST00000563512 SPDYE6P0CI01 402 aa17.95■□□□□ 0.46
NSMCE1-205ENST00000563512 SPDYE2Q495Y8 402 aa17.95■□□□□ 0.46
NSMCE1-205ENST00000563512 ZNF692Q9BU19 519 aaPredicted RBP17.88■□□□□ 0.45
NSMCE1-205ENST00000563512 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
NSMCE1-205ENST00000563512 SPDYE4A6NLX3 237 aa17.78■□□□□ 0.44
NSMCE1-205ENST00000563512 SSUH2Q9Y2M2 353 aa17.72■□□□□ 0.43
NSMCE1-205ENST00000563512 REM2Q8IYK8 340 aaPredicted RBP17.64■□□□□ 0.41
NSMCE1-205ENST00000563512 FKBP8Q14318 412 aa17.63■□□□□ 0.41
NSMCE1-205ENST00000563512 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
NSMCE1-205ENST00000563512 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.41
NSMCE1-205ENST00000563512 SPDYE1Q8NFV5 336 aaPredicted RBP17.49■□□□□ 0.39
NSMCE1-205ENST00000563512 CLEC11AQ9Y240 323 aa17.44■□□□□ 0.38
NSMCE1-205ENST00000563512 PITPNM1O00562 1244 aa17.43■□□□□ 0.38
NSMCE1-205ENST00000563512 CHRDL2Q6WN34 429 aa17.4■□□□□ 0.38
NSMCE1-205ENST00000563512 PROM2Q8N271 834 aa17.34■□□□□ 0.37
NSMCE1-205ENST00000563512 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
NSMCE1-205ENST00000563512 POTEHQ6S545 545 aa17.3■□□□□ 0.36
NSMCE1-205ENST00000563512 PRR29P0C7W0 189 aa17.25■□□□□ 0.35
NSMCE1-205ENST00000563512 FXR2P51116 673 aaKnown RBP eCLIP17.11■□□□□ 0.33
NSMCE1-205ENST00000563512 PIP4P2Q8N4L2 257 aa17.11■□□□□ 0.33
NSMCE1-205ENST00000563512 FBXO3Q9UK99 471 aa17.11■□□□□ 0.33
NSMCE1-205ENST00000563512 PRKAR2AP13861 404 aaKnown RBP17.03■□□□□ 0.32
NSMCE1-205ENST00000563512 CHADLQ6NUI6 762 aa16.96■□□□□ 0.31
NSMCE1-205ENST00000563512 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
NSMCE1-205ENST00000563512 MIER1Q8N108 512 aa16.93■□□□□ 0.3
NSMCE1-205ENST00000563512 PLCD3Q8N3E9 789 aa16.9■□□□□ 0.3
NSMCE1-205ENST00000563512 CREBZFQ9NS37 354 aa16.9■□□□□ 0.3
NSMCE1-205ENST00000563512 ABCC9O60706 1549 aa16.83■□□□□ 0.28
NSMCE1-205ENST00000563512 VASPP50552 380 aaPredicted RBP16.81■□□□□ 0.28
NSMCE1-205ENST00000563512 FARP1Q9Y4F1 1045 aaPredicted RBP16.8■□□□□ 0.28
NSMCE1-205ENST00000563512 NPM1P06748 294 aaKnown RBP eCLIP16.74■□□□□ 0.27
NSMCE1-205ENST00000563512 ZBTB47Q9UFB7 747 aaPredicted RBP16.74■□□□□ 0.27
NSMCE1-205ENST00000563512 HAX1O00165 279 aa16.7■□□□□ 0.26
NSMCE1-205ENST00000563512 KLHL34Q8N239 644 aa16.66■□□□□ 0.26
NSMCE1-205ENST00000563512 MNX1P50219 401 aaPredicted RBP16.65■□□□□ 0.26
NSMCE1-205ENST00000563512 C19orf67A6NJJ6 358 aa16.54■□□□□ 0.24
NSMCE1-205ENST00000563512 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
NSMCE1-205ENST00000563512 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
NSMCE1-205ENST00000563512 IFNLR1Q8IU57 520 aaPredicted RBP16.53■□□□□ 0.24
NSMCE1-205ENST00000563512 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
NSMCE1-205ENST00000563512 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
NSMCE1-205ENST00000563512 TSPYL2Q9H2G4 693 aaPredicted RBP16.42■□□□□ 0.22
NSMCE1-205ENST00000563512 RB1CC1Q8TDY2 1594 aa16.4■□□□□ 0.22
NSMCE1-205ENST00000563512 NUBP1P53384 320 aa16.4■□□□□ 0.22
NSMCE1-205ENST00000563512 EVX2Q03828 476 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms