RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 TRAIPQ9BWF2 469 aa10.56□□□□□ -0.72
SMARCD1-205ENST00000548573 MOV10L1Q9BXT6 1211 aaKnown RBP10.56□□□□□ -0.72
SMARCD1-205ENST00000548573 ARHGEF3Q9NR81 526 aa10.56□□□□□ -0.72
SMARCD1-205ENST00000548573 BCS1LQ9Y276 419 aa10.56□□□□□ -0.72
SMARCD1-205ENST00000548573 ACTL7BQ9Y614 415 aa10.56□□□□□ -0.72
SMARCD1-205ENST00000548573 ADGRA3Q8IWK6 1321 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 NPR1P16066 1061 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 CREB1P16220 341 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 IBSPP21815 317 aaPredicted RBP10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 ALDH1B1P30837 517 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 PDE6BP35913 854 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 ALDH5A1P51649 535 aaPredicted RBP10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 GPC3P51654 580 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 CLNS1AP54105 237 aaKnown RBP10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 UBXN2AP68543 259 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 ACVR2BQ13705 512 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 ACCSLQ4AC99 568 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 RNF43Q68DV7 783 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 KRT39Q6A163 491 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 ASRGL1Q7L266 308 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 SPICE1Q8N0Z3 855 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 ANKRD31Q8N7Z5 1873 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 BBOF1Q8ND07 529 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 SLC17A8Q8NDX2 589 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 HELQQ8TDG4 1101 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 AGAP11Q8TF27 550 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 C1orf54Q8WWF1 131 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 DDX1Q92499 740 aaKnown RBP10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 KLHL29Q96CT2 875 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 STAMBPL1Q96FJ0 436 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 TMX4Q9H1E5 349 aaPredicted RBP10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 ARHGEF10LQ9HCE6 1279 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 KCNK9Q9NPC2 374 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 NOP53Q9NZM5 478 aaKnown RBP10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 SERPINA10Q9UK55 444 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 C15orf41Q9Y2V0 281 aa10.55□□□□□ -0.72
SMARCD1-205ENST00000548573 IGF2BP3O00425 579 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 THAP12O43422 761 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 CDH16O75309 829 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 ANP32DO95626 131 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 ATF2P15336 505 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 STX2P32856 288 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 SLC1A1P43005 524 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 RARRES1P49788 294 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 ITGA8P53708 1063 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 CENPCQ03188 943 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 CCDC15Q0P6D6 951 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 STRN3Q13033 797 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 PPP1R21Q6ZMI0 780 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 MAEAQ7L5Y9 396 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 MIER3Q7Z3K6 550 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 HAUS6Q7Z4H7 955 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 ANKRD42Q8N9B4 389 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 ATL2Q8NHH9 583 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 CHURC1Q8WUH1 139 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 SEMA4DQ92854 862 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 TGS1Q96RS0 853 aaKnown RBP10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 TRIM7Q9C029 511 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 DCLK3Q9C098 648 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 DEFB129Q9H1M3 183 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 ACP6Q9NPH0 428 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 AVENQ9NQS1 362 aaPredicted RBP10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 BATF3Q9NR55 127 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 CHST7Q9NS84 486 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 NINJ2Q9NZG7 142 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 TMX2Q9Y320 296 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 SLX4Q8IY92 1834 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 GRIN3BO60391 1043 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 PLA2G6O60733 806 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 LYPLA2O95372 231 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 ADRB2P07550 413 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 CCNB1P14635 433 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 MAPK4P31152 587 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 NCKAP1LP55160 1127 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 MYO1EQ12965 1108 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 PTP4A2Q12974 167 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 SNX1Q13596 522 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 MPP2Q14168 576 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 STAT4Q14765 748 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 MTFR1Q15390 333 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 SNRNP35Q16560 246 aaKnown RBP10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 KYNUQ16719 465 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 CLEC16AQ2KHT3 1053 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 DACT2Q5SW24 774 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 CCDC174Q6PII3 467 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 NSMFQ6X4W1 530 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 CEP128Q6ZU80 1094 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 RIBC1Q8N443 379 aaPredicted RBP10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 FITM2Q8N6M3 262 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 ZSWIM2Q8NEG5 633 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 NSMCE1Q8WV22 266 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 NT5C1BQ96P26 610 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 CCDC77Q9BR77 488 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 DBNDD1Q9H9R9 158 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 TMEM8AQ9HCN3 771 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 KLHL14Q9P2G3 628 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 CTNNAL1Q9UBT7 734 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms