RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 PDXDC1Q6P996 788 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 CYP26C1Q6V0L0 522 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 HAUS6Q7Z4H7 955 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 ZBTB33Q86T24 672 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 KRI1Q8N9T8 703 aaKnown RBP18.9■□□□□ 0.62
CCNC-213ENST00000523541 EPSTI1Q96J88 318 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 ACAP3Q96P50 834 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 REEP2Q9BRK0 252 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 CDT1Q9H211 546 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 SLC38A7Q9NVC3 462 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 USP20Q9Y2K6 914 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 GDAQ9Y2T3 454 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 SF3B1O75533 1304 aaKnown RBP eCLIP18.9■□□□□ 0.62
CCNC-213ENST00000523541 LOC730098B7Z3J9 87 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 TMEM189-UBE2V1I3L0A0 370 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 CLDN3O15551 220 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 PPP6R2O75170 966 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 FAM13AO94988 1023 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 KRT18P05783 430 aaKnown RBP18.89■□□□□ 0.61
CCNC-213ENST00000523541 EPCAMP16422 314 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 MTHFRP42898 656 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 CLCN4P51793 760 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 MCM6Q14566 821 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 RRAGBQ5VZM2 374 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 ATL3Q6DD88 541 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 DCLRE1AQ6PJP8 1040 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 CCDC73Q6ZRK6 1079 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 MYCT1Q8N699 235 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 C12orf76Q8N812 135 aaPredicted RBP18.89■□□□□ 0.61
CCNC-213ENST00000523541 DDX27Q96GQ7 796 aaKnown RBP18.89■□□□□ 0.61
CCNC-213ENST00000523541 RIPOR3Q96MK2 946 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 PPP1R10Q96QC0 940 aaKnown RBP18.89■□□□□ 0.61
CCNC-213ENST00000523541 USP28Q96RU2 1077 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 TSPAN18Q96SJ8 248 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 RHOBTB2Q9BYZ6 727 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 FOXD4L1Q9NU39 408 aa18.89■□□□□ 0.61
CCNC-213ENST00000523541 TDRD15B5MCY1 1934 aaKnown RBP18.88■□□□□ 0.61
CCNC-213ENST00000523541 SMIM28A0A1B0GU29 152 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 ABLIM1O14639 778 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 TRAK2O60296 914 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 KCNE1P15382 129 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 MCL1Q07820 350 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 ATAT1Q5SQI0 421 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 FAM173BQ6P4H8 233 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 SV2BQ7L1I2 683 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 TAS1R1Q7RTX1 841 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 LINC00301Q8NCQ3 95 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 FBXL18Q96ME1 805 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 GPR62Q9BZJ7 368 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 ST6GALNAC4Q9H4F1 302 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 PLEKHA5Q9HAU0 1116 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 NR2E1Q9Y466 385 aa18.88■□□□□ 0.61
CCNC-213ENST00000523541 NPHP3-ACAD11A0A0J9YXS1 232 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 PRR33A8MZF0 331 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 TRAPPC3O43617 180 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 TBCAO75347 108 aaKnown RBP18.87■□□□□ 0.61
CCNC-213ENST00000523541 PIGRP01833 764 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 WEE2P0C1S8 567 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 GTF2BQ00403 316 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 CEBPZQ03701 1054 aaKnown RBP18.87■□□□□ 0.61
CCNC-213ENST00000523541 DHX8Q14562 1220 aaKnown RBP18.87■□□□□ 0.61
CCNC-213ENST00000523541 NOLC1Q14978 699 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCNC-213ENST00000523541 CMASQ8NFW8 434 aaPredicted RBP18.87■□□□□ 0.61
CCNC-213ENST00000523541 RABGGTAQ92696 567 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 PLEKHA4Q9H4M7 779 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 SFXN1Q9H9B4 322 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 C11orf16Q9NQ32 467 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 SEL1LQ9UBV2 794 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 CDH22Q9UJ99 828 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 TBX20Q9UMR3 447 aa18.87■□□□□ 0.61
CCNC-213ENST00000523541 CASTOR2A6NHX0 329 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 F8W810 466 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 TEX28O15482 410 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 YEATS4O95619 227 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 RPL9P32969 192 aaKnown RBP18.86■□□□□ 0.61
CCNC-213ENST00000523541 STK38Q15208 465 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 HERC4Q5GLZ8 1057 aaPredicted RBP18.86■□□□□ 0.61
CCNC-213ENST00000523541 TMC5Q6UXY8 1006 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 C15orf39Q6ZRI6 1047 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 USP49Q70CQ1 688 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 LRRC15Q8TF66 581 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 CLIC6Q96NY7 704 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 TTPALQ9BTX7 342 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 LRRC27Q9C0I9 530 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 CNTN3Q9P232 1028 aa18.86■□□□□ 0.61
CCNC-213ENST00000523541 SPTLC2O15270 562 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 PAPLNO95428 1278 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 CLTAP09496 248 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 ZSCAN22P10073 491 aaPredicted RBP18.85■□□□□ 0.61
CCNC-213ENST00000523541 GAP43P17677 238 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 POU5F1Q01860 360 aaKnown RBP18.85■□□□□ 0.61
CCNC-213ENST00000523541 UPP1Q16831 310 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 SPECC1Q5M775 1068 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 KANK3Q6NY19 840 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 HASPINQ8TF76 798 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 PIK3R5Q8WYR1 880 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 HVCN1Q96D96 273 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 BICD1Q96G01 975 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 SNX27Q96L92 541 aa18.85■□□□□ 0.61
CCNC-213ENST00000523541 PAAF1Q9BRP4 392 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms