RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 CDH7Q9ULB5 785 aa10.93□□□□□ -0.66
SRSF4-205ENST00000497015 KCNJ14Q9UNX9 436 aa10.93□□□□□ -0.66
SRSF4-205ENST00000497015 PCDHB2Q9Y5E7 798 aa10.93□□□□□ -0.66
SRSF4-205ENST00000497015 PCDHA10Q9Y5I2 948 aa10.93□□□□□ -0.66
SRSF4-205ENST00000497015 IGKV6-21A0A0C4DH24 114 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 C1QTNF9BB2RNN3 333 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 PROS1P07225 676 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 RETP07949 1114 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 C1QTNF9P0C862 333 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 FSHRP23945 695 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 TMOD1P28289 359 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 HOXA11P31270 313 aaPredicted RBP10.92□□□□□ -0.66
SRSF4-205ENST00000497015 DMWDQ09019 674 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 SRSF5Q13243 272 aaKnown RBP10.92□□□□□ -0.66
SRSF4-205ENST00000497015 ORC2Q13416 577 aaPredicted RBP10.92□□□□□ -0.66
SRSF4-205ENST00000497015 CSRP2Q16527 193 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 LAIR1Q6GTX8 287 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 RSPO2Q6UXX9 243 aaPredicted RBP10.92□□□□□ -0.66
SRSF4-205ENST00000497015 MAMSTRQ6ZN01 415 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 METTL3Q86U44 580 aaKnown RBP10.92□□□□□ -0.66
SRSF4-205ENST00000497015 GLYCTKQ8IVS8 523 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 DIS3L2Q8IYB7 885 aaKnown RBP10.92□□□□□ -0.66
SRSF4-205ENST00000497015 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 CELF5Q8N6W0 485 aaKnown RBP10.92□□□□□ -0.66
SRSF4-205ENST00000497015 RDM1Q8NG50 284 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 COL26A1Q96A83 441 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 LENG9Q96B70 501 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 KXD1Q9BQD3 176 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 SH2D3AQ9BRG2 576 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 ZNF577Q9BSK1 485 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 GCOM2Q9BZD3 368 aaPredicted RBP10.92□□□□□ -0.66
SRSF4-205ENST00000497015 ZDHHC7Q9NXF8 308 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 CEP131Q9UPN4 1083 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 PRG3Q9Y2Y8 225 aaPredicted RBP10.92□□□□□ -0.66
SRSF4-205ENST00000497015 MIA3Q5JRA6 1907 aa10.92□□□□□ -0.66
SRSF4-205ENST00000497015 CARNS1A5YM72 827 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 MAP3K7O43318 606 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 CD2BP2O95400 341 aaKnown RBP10.91□□□□□ -0.66
SRSF4-205ENST00000497015 URODP06132 367 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 PSAPP07602 524 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 NCLP19338 710 aaKnown RBP10.91□□□□□ -0.66
SRSF4-205ENST00000497015 SFNP31947 248 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 GLUD2P49448 558 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 CUL4AQ13619 759 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 GAS6Q14393 721 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 INF2Q27J81 1249 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 TUSC1Q2TAM9 212 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 PRR16Q569H4 304 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 TPRG1Q6ZUI0 275 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 PIK3AP1Q6ZUJ8 805 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 SMG8Q8ND04 991 aaKnown RBP10.91□□□□□ -0.66
SRSF4-205ENST00000497015 RSPH1Q8WYR4 309 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 SLC5A5Q92911 643 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 SNX21Q969T3 373 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 INTS4Q96HW7 963 aaKnown RBP10.91□□□□□ -0.66
SRSF4-205ENST00000497015 FAM20AQ96MK3 541 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 IFT122Q9HBG6 1241 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 HEBP1Q9NRV9 189 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 ZMIZ1Q9ULJ6 1067 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 PIN4Q9Y237 131 aaKnown RBP10.91□□□□□ -0.66
SRSF4-205ENST00000497015 ZFP37Q9Y6Q3 630 aaPredicted RBP10.91□□□□□ -0.66
SRSF4-205ENST00000497015 MYH15Q9Y2K3 1946 aa10.91□□□□□ -0.66
SRSF4-205ENST00000497015 WDR64B1ANS9 1081 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 BTBD18B2RXH4 712 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 MSH4O15457 936 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 C1RP00736 705 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 MAGEA9P43362 315 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 TRAPPC10P48553 1259 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 JAK3P52333 1124 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 DSC1Q08554 894 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 ADCY1Q08828 1119 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 SLFN12Q8IYM2 578 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 ETNPPLQ8TBG4 499 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 RABGGTAQ92696 567 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 GJA10Q969M2 543 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 SCLT1Q96NL6 688 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 NELL2Q99435 816 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 FAM126AQ9BYI3 521 aaPredicted RBP10.9□□□□□ -0.66
SRSF4-205ENST00000497015 MINDY3Q9H8M7 445 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 RSAD1Q9HA92 442 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 KCNMB3Q9NPA1 279 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 NRBP2Q9NSY0 501 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 BMP2KQ9NSY1 1161 aaPredicted RBP10.9□□□□□ -0.66
SRSF4-205ENST00000497015 HCFC1R1Q9NWW0 138 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 FNIP2Q9P278 1114 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 STK39Q9UEW8 545 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 DDX25Q9UHL0 483 aaKnown RBP10.9□□□□□ -0.66
SRSF4-205ENST00000497015 WASF3Q9UPY6 502 aa10.9□□□□□ -0.66
SRSF4-205ENST00000497015 ADAM12O43184 909 aa10.89□□□□□ -0.67
SRSF4-205ENST00000497015 GAS7O60861 476 aa10.89□□□□□ -0.67
SRSF4-205ENST00000497015 LRP3O75074 770 aa10.89□□□□□ -0.67
SRSF4-205ENST00000497015 PSMD10O75832 226 aa10.89□□□□□ -0.67
SRSF4-205ENST00000497015 BAG4O95429 457 aaKnown RBP10.89□□□□□ -0.67
SRSF4-205ENST00000497015 SKIP12755 728 aa10.89□□□□□ -0.67
SRSF4-205ENST00000497015 U2AF2P26368 475 aaKnown RBP eCLIP10.89□□□□□ -0.672e-12■■■■□ 19.4
SRSF4-205ENST00000497015 ABL2P42684 1182 aa10.89□□□□□ -0.67
SRSF4-205ENST00000497015 OR1G1P47890 313 aa10.89□□□□□ -0.67
SRSF4-205ENST00000497015 PRKCEQ02156 737 aa10.89□□□□□ -0.67
SRSF4-205ENST00000497015 NR5A1Q13285 461 aa10.89□□□□□ -0.67
SRSF4-205ENST00000497015 LRCH2Q5VUJ6 765 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms