RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PLCD3Q8N3E9 789 aa26.56■■□□□ 1.84
HLA-C-209ENST00000495835 C12orf76Q8N812 135 aaPredicted RBP26.56■■□□□ 1.84
HLA-C-209ENST00000495835 PAAF1Q9BRP4 392 aa26.56■■□□□ 1.84
HLA-C-209ENST00000495835 ZSCAN16Q9H4T2 348 aaPredicted RBP26.56■■□□□ 1.84
HLA-C-209ENST00000495835 SLC38A7Q9NVC3 462 aa26.56■■□□□ 1.84
HLA-C-209ENST00000495835 HCN4Q9Y3Q4 1203 aa26.56■■□□□ 1.84
HLA-C-209ENST00000495835 CASTOR2A6NHX0 329 aa26.55■■□□□ 1.84
HLA-C-209ENST00000495835 SPDYE4A6NLX3 237 aa26.55■■□□□ 1.84
HLA-C-209ENST00000495835 ABLIM1O14639 778 aa26.55■■□□□ 1.84
HLA-C-209ENST00000495835 NCKAP1LP55160 1127 aa26.55■■□□□ 1.84
HLA-C-209ENST00000495835 RAD51AP2Q09MP3 1159 aa26.55■■□□□ 1.84
HLA-C-209ENST00000495835 RESTQ13127 1097 aa26.55■■□□□ 1.84
HLA-C-209ENST00000495835 PTPAQ15257 358 aa26.55■■□□□ 1.84
HLA-C-209ENST00000495835 DCLRE1AQ6PJP8 1040 aa26.55■■□□□ 1.84
HLA-C-209ENST00000495835 RIN2Q8WYP3 895 aaPredicted RBP26.55■■□□□ 1.84
HLA-C-209ENST00000495835 ACAP3Q96P50 834 aa26.55■■□□□ 1.84
HLA-C-209ENST00000495835 TTPALQ9BTX7 342 aa26.55■■□□□ 1.84
HLA-C-209ENST00000495835 BLOC1S4Q9NUP1 217 aa26.55■■□□□ 1.84
HLA-C-209ENST00000495835 SRPRBQ9Y5M8 271 aaKnown RBP26.55■■□□□ 1.84
HLA-C-209ENST00000495835 SMIM28A0A1B0GU29 152 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 KIF4AO95239 1232 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 ZNF131P52739 623 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 ZXDAP98168 799 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 TMC5Q6UXY8 1006 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 BMP8AQ7Z5Y6 402 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 GPBP1Q86WP2 473 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 RASSF8Q8NHQ8 419 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 PIK3R5Q8WYR1 880 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 RAD54LQ92698 747 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 SNX21Q969T3 373 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 DDX27Q96GQ7 796 aaKnown RBP26.54■■□□□ 1.84
HLA-C-209ENST00000495835 MAN1C1Q9NR34 630 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 CLIC4Q9Y696 253 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 CITO14578 2027 aa26.54■■□□□ 1.84
HLA-C-209ENST00000495835 PLXNA3P51805 1871 aa26.53■■□□□ 1.84
HLA-C-209ENST00000495835 PDIA4P13667 645 aaKnown RBP26.53■■□□□ 1.84
HLA-C-209ENST00000495835 KCNE1P15382 129 aa26.53■■□□□ 1.84
HLA-C-209ENST00000495835 PLCG1P19174 1290 aa26.53■■□□□ 1.84
HLA-C-209ENST00000495835 DDIT3P35638 169 aa26.53■■□□□ 1.84
HLA-C-209ENST00000495835 LILRA6Q6PI73 481 aa26.53■■□□□ 1.84
HLA-C-209ENST00000495835 ZDHHC14Q8IZN3 488 aa26.53■■□□□ 1.84
HLA-C-209ENST00000495835 LARP4BQ92615 738 aaKnown RBP26.53■■□□□ 1.84
HLA-C-209ENST00000495835 REEP2Q9BRK0 252 aa26.53■■□□□ 1.84
HLA-C-209ENST00000495835 CXCL16Q9H2A7 254 aa26.53■■□□□ 1.84
HLA-C-209ENST00000495835 TRAPPC3O43617 180 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 GRIN1Q05586 938 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 KARSQ15046 597 aaKnown RBP26.52■■□□□ 1.84
HLA-C-209ENST00000495835 PTPN21Q16825 1174 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 UPP1Q16831 310 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 FAM171A1Q5VUB5 890 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 TRIM67Q6ZTA4 783 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 DENND4AQ7Z401 1863 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 HAUS6Q7Z4H7 955 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 CEP120Q8N960 986 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 RABGGTAQ92696 567 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 PARVGQ9HBI0 331 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 CNTN3Q9P232 1028 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 CCDC39Q9UFE4 941 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 CDH22Q9UJ99 828 aa26.52■■□□□ 1.84
HLA-C-209ENST00000495835 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.52■■□□□ 1.84
HLA-C-209ENST00000495835 CLDN3O15551 220 aa26.51■■□□□ 1.83
HLA-C-209ENST00000495835 MCL1Q07820 350 aa26.51■■□□□ 1.83
HLA-C-209ENST00000495835 NOLC1Q14978 699 aaKnown RBP eCLIP26.51■■□□□ 1.831e-8■□□□□ 9.6
HLA-C-209ENST00000495835 RTP2Q5QGT7 225 aa26.51■■□□□ 1.83
HLA-C-209ENST00000495835 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.51■■□□□ 1.83
HLA-C-209ENST00000495835 ZBTB33Q86T24 672 aa26.51■■□□□ 1.83
HLA-C-209ENST00000495835 ACSF2Q96CM8 615 aaPredicted RBP26.51■■□□□ 1.83
HLA-C-209ENST00000495835 B3GALT6Q96L58 329 aa26.51■■□□□ 1.83
HLA-C-209ENST00000495835 SNX27Q96L92 541 aa26.51■■□□□ 1.83
HLA-C-209ENST00000495835 MFSD14AQ96MC6 490 aa26.51■■□□□ 1.83
HLA-C-209ENST00000495835 TSHZ2Q9NRE2 1034 aa26.51■■□□□ 1.83
HLA-C-209ENST00000495835 ZDHHC7Q9NXF8 308 aa26.51■■□□□ 1.83
HLA-C-209ENST00000495835 FBXO2Q9UK22 296 aaPredicted RBP26.51■■□□□ 1.83
HLA-C-209ENST00000495835 MTMR6Q9Y217 621 aa26.51■■□□□ 1.83
HLA-C-209ENST00000495835 NPHP3-ACAD11A0A0J9YXS1 232 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 C2CD4DB7Z1M9 353 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 TGM5O43548 720 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 STX6O43752 255 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 B3GAT3O94766 335 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 FAM13AO94988 1023 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 WEE2P0C1S8 567 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 CLCNKBP51801 687 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 MCM6Q14566 821 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 KYAT1Q16773 422 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 GLRA4Q5JXX5 417 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 KANK3Q6NY19 840 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 CCDC149Q6ZUS6 474 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 OTOP3Q7RTS5 596 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 MYCT1Q8N699 235 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 TDRD5Q8NAT2 981 aaKnown RBP26.5■■□□□ 1.83
HLA-C-209ENST00000495835 LNX1Q8TBB1 728 aaPredicted RBP26.5■■□□□ 1.83
HLA-C-209ENST00000495835 CACNG4Q9UBN1 327 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 STK17AQ9UEE5 414 aa26.5■■□□□ 1.83
HLA-C-209ENST00000495835 TECTAO75443 2155 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 CCDC195A0A1B0GUA6 201 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 KRT18P05783 430 aaKnown RBP26.49■■□□□ 1.83
HLA-C-209ENST00000495835 FGFR3P22607 806 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 RPL9P32969 192 aaKnown RBP26.49■■□□□ 1.83
HLA-C-209ENST00000495835 TXLNAP40222 546 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 OSTNP61366 133 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms