RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 MAP3K13O43283 966 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 SLC26A4O43511 780 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 SMIM24O75264 130 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 EEF2P13639 858 aaKnown RBP22.1■■□□□ 1.13
COL13A1-208ENST00000479733 IVDP26440 423 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 POLGP54098 1239 aaPredicted RBP22.1■■□□□ 1.13
COL13A1-208ENST00000479733 AP3B2Q13367 1082 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 C2CD6Q53TS8 623 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 STK32AQ8WU08 396 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 SLC5A5Q92911 643 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 SH3GL3Q99963 347 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 SRCAPQ6ZRS2 3230 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 TBX3O15119 743 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 TPBGLP0DKB5 382 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 MXRA7P84157 204 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 POC1B-GALNT4F8VUJ3 575 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 CDH16O75309 829 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 EPC2Q52LR7 807 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 AP1ARQ63HQ0 302 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 C4orf33Q8N1A6 199 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 C7orf43Q8WVR3 580 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 POLR3CQ9BUI4 534 aaPredicted RBP22.09■■□□□ 1.13
COL13A1-208ENST00000479733 CYP39A1Q9NYL5 469 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 GGA1Q9UJY5 639 aa22.09■■□□□ 1.13
COL13A1-208ENST00000479733 CCNG1P51959 295 aa22.08■■□□□ 1.13
COL13A1-208ENST00000479733 CETN1Q12798 172 aa22.08■■□□□ 1.13
COL13A1-208ENST00000479733 PPP1R21Q6ZMI0 780 aa22.08■■□□□ 1.13
COL13A1-208ENST00000479733 FAM163AQ96GL9 167 aaPredicted RBP22.08■■□□□ 1.13
COL13A1-208ENST00000479733 HSD17B14Q9BPX1 270 aa22.08■■□□□ 1.13
COL13A1-208ENST00000479733 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.08■■□□□ 1.13
COL13A1-208ENST00000479733 GAKO14976 1311 aa22.08■■□□□ 1.13
COL13A1-208ENST00000479733 FAM47DPA6NHR8 397 aa22.08■■□□□ 1.12
COL13A1-208ENST00000479733 RRM1P23921 792 aa22.08■■□□□ 1.12
COL13A1-208ENST00000479733 SKIV2L2P42285 1042 aaKnown RBP22.08■■□□□ 1.12
COL13A1-208ENST00000479733 MOXD1Q6UVY6 613 aa22.08■■□□□ 1.12
COL13A1-208ENST00000479733 CBWD1Q9BRT8 395 aa22.08■■□□□ 1.12
COL13A1-208ENST00000479733 AMNQ9BXJ7 453 aa22.08■■□□□ 1.12
COL13A1-208ENST00000479733 LRMDAQ9H2I8 198 aa22.08■■□□□ 1.12
COL13A1-208ENST00000479733 WRAP73Q9P2S5 460 aaPredicted RBP22.08■■□□□ 1.12
COL13A1-208ENST00000479733 GOLGA8IPA6NC78 632 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 GOLGA8JA6NMD2 632 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 PTDSS1P48651 473 aaKnown RBP22.07■■□□□ 1.12
COL13A1-208ENST00000479733 VAMP7P51809 220 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 TCP10Q12799 353 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 LRRC42Q9Y546 428 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 LIN7AO14910 233 aaPredicted RBP22.07■■□□□ 1.12
COL13A1-208ENST00000479733 MAPK13O15264 365 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 GJC1P36383 396 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 CACNB3P54284 484 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 LLGL2Q6P1M3 1020 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 FBXO11Q86XK2 927 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 ZFPM1Q8IX07 1006 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 LMNTD2Q8IXW0 634 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 ANKRD35Q8N283 1001 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 PSPC1Q8WXF1 523 aaKnown RBP22.07■■□□□ 1.12
COL13A1-208ENST00000479733 SYT15Q9BQS2 421 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 SH2D3AQ9BRG2 576 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 PIDD1Q9HB75 910 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 ANAPC7Q9UJX3 599 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 FSCN2O14926 492 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 GAS8O95995 478 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 SREBF1P36956 1147 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 C12orf50Q8NA57 414 aaPredicted RBP22.07■■□□□ 1.12
COL13A1-208ENST00000479733 TSC22D3Q99576 134 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 CCDC77Q9BR77 488 aa22.07■■□□□ 1.12
COL13A1-208ENST00000479733 NOCTQ9UK39 431 aaKnown RBP22.07■■□□□ 1.12
COL13A1-208ENST00000479733 CDK5RAP2Q96SN8 1893 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 K7ENM7 598 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 T-ENOLP0DO92 83 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 IL1R1P14778 569 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 FMO1Q01740 532 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 RASA3Q14644 834 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 AGGF1Q8N302 714 aaeCLIP22.06■■□□□ 1.12
COL13A1-208ENST00000479733 CNBD1Q8NA66 436 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 RPGRQ92834 1020 aaKnown RBP22.06■■□□□ 1.12
COL13A1-208ENST00000479733 ARHGEF1Q92888 912 aaKnown RBP22.06■■□□□ 1.12
COL13A1-208ENST00000479733 GRAMD1AQ96CP6 724 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 TRAIPQ9BWF2 469 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 MOV10L1Q9BXT6 1211 aaKnown RBP22.06■■□□□ 1.12
COL13A1-208ENST00000479733 DENND2DQ9H6A0 471 aaPredicted RBP22.06■■□□□ 1.12
COL13A1-208ENST00000479733 USH1CQ9Y6N9 552 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 LRRD1A4D1F6 860 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 WFS1O76024 890 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 ICA1Q05084 483 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 NFIAQ12857 509 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 ACVR2BQ13705 512 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 STXBP4Q6ZWJ1 553 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 SLC7A6OSQ96CW6 309 aaPredicted RBP22.06■■□□□ 1.12
COL13A1-208ENST00000479733 POLLQ9UGP5 575 aa22.06■■□□□ 1.12
COL13A1-208ENST00000479733 NHSQ6T4R5 1651 aa22.05■■□□□ 1.12
COL13A1-208ENST00000479733 ADGRA3Q8IWK6 1321 aa22.05■■□□□ 1.12
COL13A1-208ENST00000479733 KRT15P19012 456 aa22.05■■□□□ 1.12
COL13A1-208ENST00000479733 CCDC15Q0P6D6 951 aa22.05■■□□□ 1.12
COL13A1-208ENST00000479733 PARP6Q2NL67 630 aa22.05■■□□□ 1.12
COL13A1-208ENST00000479733 TMEM154Q6P9G4 183 aa22.05■■□□□ 1.12
COL13A1-208ENST00000479733 SAMD1Q6SPF0 538 aaPredicted RBP22.05■■□□□ 1.12
COL13A1-208ENST00000479733 OTOP1Q7RTM1 612 aa22.05■■□□□ 1.12
COL13A1-208ENST00000479733 KREMEN1Q96MU8 473 aa22.05■■□□□ 1.12
COL13A1-208ENST00000479733 LRRC4BQ9NT99 713 aa22.05■■□□□ 1.12
COL13A1-208ENST00000479733 GRID1Q9ULK0 1009 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms