RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 H0Y626 953 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 TXNP10599 105 aaKnown RBP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 MARCH10Q8NA82 808 aaPredicted RBP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 TMEM260Q9NX78 707 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 SCAF8Q9UPN6 1271 aaKnown RBP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 SNAPC2Q13487 334 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 VN1R5Q7Z5H4 357 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 SYT2Q8N9I0 419 aaPredicted RBP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 RBM41Q96IZ5 413 aaKnown RBP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 AAASQ9NRG9 546 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 CLASP1Q7Z460 1538 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 USP17L15C9J2P7 530 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 USP17L13C9JLJ4 530 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 USP17L11C9JVI0 530 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 USP17L18D6R9N7 530 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 USP17L22D6RA61 530 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 USP17L17D6RBQ6 530 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 USP17L19D6RCP7 530 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 USP17L20D6RJB6 530 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 KRT14P02533 472 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 USP17L24Q0WX57 530 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 ALS2CLQ60I27 953 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 USP17L6PQ6QN14 398 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 IGFLR1Q9H665 355 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 RWDD2AQ9UIY3 292 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 COL15A1P39059 1388 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 NLRP11P59045 1033 aaKnown RBP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 SEPT2Q15019 361 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 NOVA2Q9UNW9 492 aaKnown RBP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 MAP3K4Q9Y6R4 1608 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 TARSL2A2RTX5 802 aaKnown RBP11.83□□□□□ -0.51
PRPF40A-202ENST00000410080 ERVV-1B6SEH8 477 aa11.83□□□□□ -0.51
PRPF40A-202ENST00000410080 CLMNQ96JQ2 1002 aa11.83□□□□□ -0.51
PRPF40A-202ENST00000410080 JPH1Q9HDC5 661 aaPredicted RBP11.83□□□□□ -0.51
PRPF40A-202ENST00000410080 MAGI3Q5TCQ9 1506 aa11.83□□□□□ -0.51
PRPF40A-202ENST00000410080 SKAP2O75563 359 aaPredicted RBP11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 HPGDP15428 266 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 HMGCS2P54868 508 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 C6orf118Q5T5N4 469 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 ST13P4Q8IZP2 240 aaPredicted RBP11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 RNF149Q8NC42 400 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 SCFD1Q8WVM8 642 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 PITPNM3Q9BZ71 974 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 SPON1Q9HCB6 807 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 SPATS2LQ9NUQ6 558 aaKnown RBP11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 WDR47O94967 919 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 SEC31AO94979 1220 aaKnown RBP11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 CHRNA5P30532 468 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 CDH6P55285 790 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 ZRANB3Q5FWF4 1079 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 TMEM35BQ8NCS4 154 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 COG1Q8WTW3 980 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 NDEL1Q9GZM8 345 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 SLC39A10Q9ULF5 831 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 RPS6KA5O75582 802 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 STAT3P40763 770 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 EPHB4P54760 987 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 NCKAP1LP55160 1127 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 SNX17Q15036 470 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 DUOXA2Q1HG44 320 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 ZNF746Q6NUN9 644 aaPredicted RBP11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 CASZ1Q86V15 1759 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 ACAD9Q9H845 621 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 COMMD2Q86X83 199 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 FOXP4Q8IVH2 680 aaPredicted RBP11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 SLC25A41Q8N5S1 370 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 SLC44A5Q8NCS7 719 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 PAGE5Q96GU1 130 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 DYRK3O43781 588 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 SYNCRIPO60506 623 aaKnown RBP11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 PALMO75781 387 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 GUCY1A2P33402 732 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 SEMA3FQ13275 785 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 DDX42Q86XP3 938 aaKnown RBP eCLIP11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 ZNF555Q8NEP9 628 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 NEUROD4Q9HD90 331 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 IGSF1Q8N6C5 1336 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 POTEMA6NI47 508 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 PDHA1P08559 390 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 PTPN12Q05209 780 aaKnown RBP11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 NUGGCQ68CJ6 796 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 CENPPQ6IPU0 288 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 KRT78Q8N1N4 520 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 KIAA1586Q9HCI6 787 aa11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 ABI2Q9NYB9 513 aaPredicted RBP11.83□□□□□ -0.52
PRPF40A-202ENST00000410080 POTEFA5A3E0 1075 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 POTEIP0CG38 1075 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 ADRA2BP18089 450 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 PRDX5P30044 214 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 ALDH18A1P54886 795 aaKnown RBP11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 CCDC15Q0P6D6 951 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 TRIM32Q13049 653 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 TP53BP2Q13625 1128 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 SLC39A14Q15043 492 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 POTEGQ6S5H5 508 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 POTEEQ6S8J3 1075 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 HORMAD1Q86X24 394 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 LXNQ9BS40 222 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 ZNF229Q9UJW7 825 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms