RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 AmphQ7TQF7 686 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ahcyl1Q80SW1 530 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Elmo3Q8BYZ7 720 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Vmn1r199Q8R280 367 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ube2sQ921J4 223 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 HgsQ99LI8 775 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Uchl3Q9JKB1 230 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Cntn6Q9JMB8 1028 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Itgb1bp2Q9R000 350 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tjp2Q9Z0U1 1167 aaKnown RBP12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Sh2d4bA6X942 431 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 DgkkE9Q7N4 1118 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Zfp105G3X9I0 524 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Rps6ka1P18653 724 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Lrch1P62046 709 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Hdhd2Q3UGR5 259 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ccdc157Q5SPX1 718 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Cyp3a11Q64459 504 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 KaznQ69ZS8 779 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Lrig3Q6P1C6 1117 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tmem117Q8BH18 514 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Morc4Q8BMD7 928 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Pgm5Q8BZF8 567 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Fbxl5Q8C2S5 690 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Dact1Q8R4A3 778 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 NwcQ9CQI4 244 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Olr1Q9EQ09 363 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Usp29Q9ES63 869 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Myh9Q8VDD5 1960 aaKnown RBP12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Taf1Q80UV9 1891 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Gm10110D3Z5M2 615 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Gm21973F6WEZ7 68 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Pja1O55176 578 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 CraddO88843 199 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Usp4P35123 962 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Znf367Q0VDT2 340 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Trip13Q3UA06 432 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Kctd19Q562E2 927 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 PapolaQ61183 739 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Sin3bQ62141 1098 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Mcf2lQ64096 1149 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Cspg5Q71M36 566 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 F13a1Q8BH61 732 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Depdc1bQ8BH88 529 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Anapc5Q8BTZ4 740 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ccdc169Q8BXX9 214 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tmem161bQ8C2L6 487 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Lin9Q8C735 542 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 CntrobQ8CB62 887 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Mmgt1Q8K273 131 aaKnown RBP12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Cyp4a12aQ91WL5 508 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Il21rQ9JHX3 529 aa12.12□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Gcnt4E9Q649 455 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Nptx2O70340 429 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 PrphP15331 475 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Taf1bP97358 586 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tubb5P99024 444 aaKnown RBP12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ccdc114Q3UX62 658 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Spdye4aQ5IBH6 268 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 GcgrQ61606 485 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Srd5a1Q68FF9 255 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Q6PD19 689 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Dcaf15Q6PFH3 600 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Psmd5Q8BJY1 504 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Klhl7Q8BUL5 586 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 GlmnQ8BZM1 596 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Kcnv1Q8BZN2 503 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Epc2Q8C0I4 808 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 4921504E06RikQ8CET2 560 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Spata2Q8K004 515 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tex13bQ99MW5 186 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Vta1Q9CR26 309 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ergic2Q9CR89 377 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 PrameQ9D4Z5 464 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Rnf103Q9R1W3 683 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Pacsin2Q9WVE8 486 aaKnown RBP12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 TprnA2AI08 749 aaKnown RBP12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Mt-CybP00158 381 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 P01734 135 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 FechP22315 420 aaKnown RBP12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Specc1Q5SXY1 1067 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 NrcamQ810U4 1256 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Oscp1Q8BHW2 379 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ttc16Q8C1F5 767 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tldc1Q8K0P3 455 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 FktnQ8R507 461 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Spats2lQ91WJ7 558 aaKnown RBP12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Slc15a2Q9ES07 729 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Sfmbt1Q9JMD1 863 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Gyg1Q9R062 333 aa12.11□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Osbpl7A2A716 963 aa12.1□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Fam71aB7XG49 585 aa12.1□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Vmn2r63E9Q0K5 859 aa12.1□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Gm9268E9Q0M3 861 aa12.1□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Sec24cG3X972 1096 aaKnown RBP12.1□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Vmn2r62K7N712 859 aa12.1□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Stra6O70491 670 aa12.1□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Apba3O88888 571 aa12.1□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Slc3a2P10852 526 aaKnown RBP12.1□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Bcat1P24288 386 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms