RNA–Protein interactions for RNA: ENSMUST00000052708.6

Ckap2l-201, Transcript of Cytoskeleton-associated protein 2-like, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2l, Length 3,137 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2l-201ENSMUST00000052708 Tbc1d10bQ8BHL3 798 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Olfml3Q8BK62 406 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Zc3h6Q8BYK8 1177 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cyp2c50Q91X77 490 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Sertad2Q9JJG5 309 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Trpm5Q9JJH7 1158 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Egfl6Q9JJZ5 550 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cnbd1B1AWM0 430 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Guca2bO09051 106 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Nap1l1P28656 391 aaKnown RBP9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 SpoplQ2M2N2 392 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Rnf40Q3U319 1001 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Muc3aQ3U5A2 218 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Tp53i13Q5F267 385 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Ccdc85aQ5SP85 500 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 F13a1Q8BH61 732 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Usp37Q8C0R0 979 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Znf131Q8K3J5 619 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Klhl20Q8VCK5 604 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Osbpl1aQ91XL9 950 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Igdcc4Q9EQS9 1252 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Tmod3Q9JHJ0 352 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Gm13084A2A8N0 494 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Ptchd4B9EKX1 904 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Slc6a20bO88575 635 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Calb1P12658 261 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Fam107bQ3TGF2 131 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Dpcr1Q3TNW5 500 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Tsr1Q5SWD9 803 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 WhrnQ80VW5 918 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Fam49aQ8BHZ0 323 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Mettl24Q8CCB5 363 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Kat5Q8CHK4 513 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Tdrd7Q8K1H1 1086 aaKnown RBP9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Sv2aQ9JIS5 742 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Maged1Q9QYH6 775 aaKnown RBP9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Trim10Q9WUH5 489 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Plxna1P70206 1894 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Scn1aA2APX8 2009 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Igkv10-96A0A140T8M1 115 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 C2cd2E9Q3C1 696 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 AfmO89020 608 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Map2k1P31938 393 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Rad23aP54726 363 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Klra9Q2TJJ8 266 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Mief2Q5NCS9 454 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cyp2c29Q64458 490 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Sh3d21Q7TSG5 549 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Znf579Q80VM4 562 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 RragaQ80X95 313 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Erlin2Q8BFZ9 340 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 B3glctQ8BHT6 489 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Pi4kbQ8BKC8 816 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Znf467Q8JZL0 594 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 1700020D05RikQ99PB1 294 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 RpainQ9CWY9 219 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 TtpalQ9D3D0 343 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cep83Q9D5R3 692 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Atp13a1Q9EPE9 1200 aaKnown RBP9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cse1lQ9ERK4 971 aaKnown RBP9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Ccdc152E9PX14 254 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Ifnar1P33896 590 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Hace1Q3U0D9 909 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 LbrQ3U9G9 626 aaKnown RBP9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Clul1Q3ZRW6 464 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Lamb3Q61087 1168 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Tcaf3Q6QR59 914 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Snd1Q78PY7 910 aaKnown RBP9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 PhkbQ7TSH2 1085 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Sdad1Q80UZ2 687 aaKnown RBP9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 OgtQ8CGY8 1046 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 VasnQ9CZT5 673 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 ToporslQ9D2F8 683 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Grtp1Q9D3N8 359 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cfap53Q9D439 514 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Ripk3Q9QZL0 486 aa9.73□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Dock3Q8CIQ7 2027 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Hoxd10P28359 340 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Mmp3P28862 477 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Tmod1P49813 359 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cct5P80316 541 aaKnown RBP9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Meis3P97368 378 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Grm1P97772 1199 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Tmem232Q5K6N0 675 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cep112Q5PR68 954 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Avpr1aQ62463 423 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cyp3a16Q64481 504 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Rnf139Q7TMV1 668 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Trim6Q8BGE7 488 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Klhl11Q8CE33 709 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Zfp64Q99KE8 643 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 4930550L24RikQ99PA7 320 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Rfx5Q9JL61 658 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Prpf40aQ9R1C7 953 aaKnown RBP9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Arih2Q9Z1K6 492 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Lama3Q61789 3330 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Unc13dB2RUP2 1085 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Gm3164L7N2B9 238 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Gm3264L7N2C5 238 aa9.72□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Kpna6O35345 536 aa9.72□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms