RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Muc3aQ3U5A2 218 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Nlrp4eQ66X19 978 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Wasf2Q8BH43 497 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Scfd2Q8BTY8 684 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Tph2Q8CGV2 488 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Afg3l2Q8JZQ2 802 aaKnown RBP11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Vmn1r213Q8R278 384 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Otud7aQ8R554 926 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Lrrc57Q9D1G5 239 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Rexo2Q9D8S4 237 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 NagaQ9QWR8 415 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Bub1bQ9Z1S0 1052 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 CluhQ5SW19 1315 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 4930523C07RikE9Q2T4 99 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Vmn2r71L7N2D8 855 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 AgxtO35423 414 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Eno3P21550 434 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Epha3P29319 983 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Znf746Q3U133 652 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Lrrc43Q3V0L5 667 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Usp1Q8BJQ2 784 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Usp37Q8C0R0 979 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ino80bQ99PT3 375 aaKnown RBP11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Cpne8Q9DC53 577 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ankrd63A2ARS0 390 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gm1758F6VZZ1 202 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Zfp212G3X8R7 492 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Usp35M0QWN7 1009 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Rag1P15919 1040 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Fmr1P35922 614 aaKnown RBP11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 FerP70451 823 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 9130409I23RikQ3TS87 320 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Kif11Q6P9P6 1052 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gxylt2Q810K9 444 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Efl1Q8C0D5 1127 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 CenpuQ8C4M7 410 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gnl3Q8CI11 538 aaKnown RBP11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gtpbp10Q8K013 366 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Kiaa0319lQ8K135 1048 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 E2f4Q8R0K9 410 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Acot11Q8VHQ9 594 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Trpv6Q91WD2 767 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 St5Q924W7 1134 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 MmadhcQ99LS1 296 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Trim54Q9ERP3 366 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Capn10Q9ESK3 666 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ing2Q9ESK4 281 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Adarb2Q9JI20 745 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Diaph3Q9Z207 1171 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Arap2Q8BZ05 1703 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ube4aE9Q735 1028 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Mylk3Q3UIZ8 795 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Prr7Q3V0I2 269 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Cyfip1Q7TMB8 1253 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Pja2Q80U04 707 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ppp4r4Q8C0Y0 875 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Pkn3Q8K045 878 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Pdik1lQ8QZR7 341 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Bbs5Q9CZQ9 341 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 March8Q9DBD2 286 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Kat2aQ9JHD2 830 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ltbp1Q8CG19 1712 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Esr2O08537 530 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Trim43bP86448 445 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gsdmc4Q3TR54 480 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Garnl3Q3V0G7 1038 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 E2f5Q61502 335 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Oca2Q62052 833 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Usp6nlQ80XC3 819 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gbp5Q8CFB4 590 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 PdxkQ8K183 312 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Q8K2W9 541 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Lzts2Q91YU6 671 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Rfc4Q99J62 364 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Med21Q9CQ39 144 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Alpk1Q9CXB8 1231 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Hsd3b7Q9EQC1 369 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Eif2ak1Q9Z2R9 619 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Rhbdl2A2AGA4 302 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Adcy1O88444 1118 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Slurp2P0DP59 97 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Kcnma1Q08460 1209 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Rasip1Q3U0S6 961 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Nuak1Q641K5 658 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Mettl25Q6NXH8 597 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Nop9Q8BMC4 636 aaKnown RBP11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Sox30Q8CGW4 782 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 NcaldQ91X97 193 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Taf7lQ9D3R9 471 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ccdc103Q9D9P2 237 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Prkab1Q9R078 270 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Foxo4Q9WVH3 505 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Bnip3lQ9Z2F7 218 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Tbc1d10aP58802 500 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ext2P70428 718 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Xxylt1Q3U4G3 392 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Heatr9Q5QNV8 569 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Xlr3cQ61806 226 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Arl13bQ640N2 427 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Smndc1Q8BGT7 238 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms