RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 GgcxQ9QYC7 757 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Adgrf5G5E8Q8 1348 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Foxm1O08696 760 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Asna1O54984 348 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Soat2O88908 525 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ifnb1P01575 182 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 FynP39688 537 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 GypcQ78HU7 95 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 TdrkhQ80VL1 560 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Tlr3Q99MB1 905 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Zcrb1Q9CZ96 217 aaKnown RBP14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Cyp4f14Q9EP75 524 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Trim30bE9PVL6 203 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm7247Q6UY52 187 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ccdc63Q8CDV6 558 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 B3galt6Q91Z92 325 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Alpk1Q9CXB8 1231 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Morc3F7BJB9 942 aaKnown RBP14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Pik3r1P26450 724 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Smad1P70340 465 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Col6a1Q04857 1025 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Trim63Q38HM4 350 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 LbrQ3U9G9 626 aaKnown RBP14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Lrig2Q52KR2 1054 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Nckap5lQ6GQX2 1323 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Vmn2r79E9Q067 851 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Trim43cP86449 446 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Edem3Q2HXL6 931 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Fam107aQ78TU8 144 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Plekhm3Q8BM47 761 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Epsti1Q8VDI1 314 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 StrbpQ91WM1 672 aaKnown RBP14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ddx28Q9CWT6 540 aaKnown RBP14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Mrpl28Q9D1B9 257 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Cnbd2Q9D5U8 673 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 GdaQ9R111 454 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Zfp626A0A0U1RQ84 676 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Coq8aQ60936 645 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Adgrl3Q80TS3 1537 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Tcp10bE9PYJ0 438 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Zfp277E9Q6D6 583 aaKnown RBP14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Eef2kO08796 724 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 ChrngP04760 519 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 OatP29758 439 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Adrbk2Q3UYH7 688 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Terb1Q8C0V1 768 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Apol9bQ8C7I4 310 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Apol9aQ8VDU3 310 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Kat2bQ9JHD1 813 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 4930469K13RikA0A286YDB2 92 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 PtgdrP70263 357 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Zc3h15Q3TIV5 426 aaKnown RBP14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rhot1Q8BG51 631 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Atg14Q8CDJ3 492 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Micu3Q9CTY5 523 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Abcg8Q9DBM0 673 aa14.64□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ccdc85cE9Q6B2 420 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 PolgP54099 1218 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 HpcaP84075 193 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Atl2Q6PA06 583 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gtse1Q8R080 741 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Eif3hQ91WK2 352 aaKnown RBP14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Zfp655Q9CZP3 541 aaKnown RBP14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ttc33Q9D6K7 262 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ehd4Q9EQP2 541 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm2832F7AEC7 200 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Tfe3Q64092 572 aaKnown RBP14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Atp6v0d2Q80SY3 350 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Trim62Q80V85 475 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Frmd4aQ8BIE6 1020 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Arid5bQ8BM75 1188 aaKnown RBP14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Homer3Q99JP6 356 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Tk2Q9R088 270 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Myl2P51667 166 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Xxylt1Q3U4G3 392 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Cyp3a13Q64464 503 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Trim45Q6PFY8 580 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Slain2Q8CI08 581 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Batf3Q9D275 118 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Tjap1Q9DCD5 539 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Add2Q9QYB8 725 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Zfp882E9Q4R4 555 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Armcx2Q6A058 784 aaKnown RBP14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm3460E9QAI8 215 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gjb6P70689 261 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ccz1Q8C1Y8 480 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 TbccQ8VCN9 341 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rassf7Q9DD19 359 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Zbtb7aO88939 569 aaKnown RBP14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Olfm1O88998 485 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Arhgap45Q3TBD2 1116 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Dcaf5Q80T85 946 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Nme3Q9WV85 169 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Col1a2Q01149 1372 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Cacna1dQ99246 2179 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm8257E9Q8R3 264 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Orm2P07361 207 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gpr182P43142 395 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 PrcpQ7TMR0 491 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rasgrp4Q8BTM9 673 aa14.63□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms