RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 SAM4Q08985 325 aaKnown RBP-0.31□□□□□ -2.46
snR49snR49 YPL119C-AQ3E751 87 aa-0.31□□□□□ -2.46
snR49snR49 NBL1Q3E7Y6 73 aa-0.31□□□□□ -2.46
snR49snR49 SLH1P53327 1967 aaKnown RBP-0.32□□□□□ -2.46
snR49snR49 CAM1P29547 415 aaKnown RBP-0.32□□□□□ -2.46
snR49snR49 SPT4P32914 102 aaPredicted RBP-0.32□□□□□ -2.46
snR49snR49 ERV15P38312 142 aa-0.32□□□□□ -2.46
snR49snR49 RCY1P39531 840 aa-0.32□□□□□ -2.46
snR49snR49 AGE2P40529 298 aa-0.32□□□□□ -2.46
snR49snR49 YKE4P40544 346 aa-0.32□□□□□ -2.46
snR49snR49 DBP6P53734 629 aaKnown RBP-0.32□□□□□ -2.46
snR49snR49 ASI3P53983 676 aa-0.32□□□□□ -2.46
snR49snR49 TAF9Q05027 157 aa-0.32□□□□□ -2.46
snR49snR49 OAC1P32332 324 aa-0.33□□□□□ -2.46
snR49snR49 UIP5P36137 443 aa-0.33□□□□□ -2.46
snR49snR49 CTR2P38865 189 aa-0.33□□□□□ -2.46
snR49snR49 NPT1P39683 429 aaKnown RBP-0.33□□□□□ -2.46
snR49snR49 YGR219WP53307 113 aa-0.33□□□□□ -2.46
snR49snR49 APC9Q12107 265 aa-0.33□□□□□ -2.46
snR49snR49 SKS1Q12505 502 aa-0.33□□□□□ -2.46
snR49snR49 Q0255P03881 472 aa-0.34□□□□□ -2.46
snR49snR49 AQY2P0CD90 149 aa-0.34□□□□□ -2.46
snR49snR49 AKR2Q12013 749 aa-0.34□□□□□ -2.46
snR49snR49 USB1Q12208 290 aaKnown RBP-0.34□□□□□ -2.46
snR49snR49 UGA1P17649 471 aa-0.35□□□□□ -2.47
snR49snR49 YKL063CP35725 167 aa-0.35□□□□□ -2.47
snR49snR49 RCN1P36054 211 aa-0.35□□□□□ -2.47
snR49snR49 YER076CP40049 302 aa-0.35□□□□□ -2.47
snR49snR49 ATC1Q04005 294 aa-0.35□□□□□ -2.47
snR49snR49 SLD7Q08457 257 aa-0.35□□□□□ -2.47
snR49snR49 RPC37P36121 282 aa-0.36□□□□□ -2.47
snR49snR49 PRS4P38063 326 aaPredicted RBP-0.36□□□□□ -2.47
snR49snR49 ARC15P40518 154 aaRIP-Chip data-0.36□□□□□ -2.47not detected
snR49snR49 MAL13P53338 473 aa-0.36□□□□□ -2.47
snR49snR49 RNR2P09938 399 aaKnown RBP-0.37□□□□□ -2.47
snR49snR49 SWD2P36104 329 aaPredicted RBP-0.37□□□□□ -2.47
snR49snR49 SVP26P38869 228 aa-0.37□□□□□ -2.47
snR49snR49 EOS1P53938 366 aa-0.37□□□□□ -2.47
snR49snR49 DBP9Q06218 594 aaKnown RBP-0.37□□□□□ -2.47
snR49snR49 TAL1P15019 335 aaKnown RBP-0.38□□□□□ -2.47
snR49snR49 CWP1P28319 239 aa-0.38□□□□□ -2.47
snR49snR49 LIN1P38852 340 aaPredicted RBP-0.38□□□□□ -2.47
snR49snR49 FET3P38993 636 aa-0.38□□□□□ -2.47
snR49snR49 IBA57P47158 497 aa-0.38□□□□□ -2.47
snR49snR49 CUE3P53137 624 aaKnown RBP-0.38□□□□□ -2.47
snR49snR49 YGR026WP53217 278 aa-0.38□□□□□ -2.47
snR49snR49 CTF19Q02732 369 aa-0.38□□□□□ -2.47
snR49snR49 FRE6Q12473 712 aa-0.38□□□□□ -2.47
snR49snR49 RPC40P07703 335 aaKnown RBP-0.39□□□□□ -2.47
snR49snR49 GAL3P13045 520 aa-0.39□□□□□ -2.47
snR49snR49 YHR125WP38831 101 aa-0.39□□□□□ -2.47
snR49snR49 SER33P40510 469 aa-0.39□□□□□ -2.47
snR49snR49 YPL077CQ02831 240 aa-0.39□□□□□ -2.47
snR49snR49 YMR111CQ04461 462 aaPredicted RBP-0.39□□□□□ -2.47
snR49snR49 ASR1Q06834 288 aa-0.39□□□□□ -2.47
snR49snR49 EMP46Q12396 444 aa-0.39□□□□□ -2.47
snR49snR49 YAL064W-BO13512 126 aa-0.4□□□□□ -2.47
snR49snR49 RNA15P25299 296 aaPredicted RBP-0.4□□□□□ -2.47
snR49snR49 COS8P38723 381 aa-0.4□□□□□ -2.47
snR49snR49 PEX18P38855 283 aa-0.4□□□□□ -2.47
snR49snR49 YIL001WP40560 513 aa-0.4□□□□□ -2.47
snR49snR49 VPS20Q04272 221 aa-0.4□□□□□ -2.47
snR49snR49 YPL162CQ12042 273 aa-0.4□□□□□ -2.47
snR49snR49 BBP1Q12365 385 aa-0.4□□□□□ -2.47
snR49snR49 PAA1Q12447 191 aaKnown RBP-0.4□□□□□ -2.47
snR49snR49 MSB2P32334 1306 aa-0.4□□□□□ -2.47
snR49snR49 COX5AP00424 153 aa-0.41□□□□□ -2.48
snR49snR49 SWC5P38326 303 aa-0.41□□□□□ -2.48
snR49snR49 SSH1P38353 490 aaKnown RBP-0.41□□□□□ -2.48
snR49snR49 YHL049CP38722 271 aa-0.41□□□□□ -2.48
snR49snR49 PRM9P39551 298 aa-0.41□□□□□ -2.48
snR49snR49 ARP5P53946 755 aa-0.41□□□□□ -2.48
snR49snR49 YMR279CQ03263 540 aa-0.41□□□□□ -2.48
snR49snR49 NEJ1Q06148 342 aa-0.41□□□□□ -2.48
snR49snR49 AI5_BETAQ9ZZX0 354 aa-0.41□□□□□ -2.48
snR49snR49 RPL4AP10664 362 aaKnown RBP-0.42□□□□□ -2.48
snR49snR49 MSS116P15424 664 aaKnown RBP-0.42□□□□□ -2.48
snR49snR49 PET9P18239 318 aaKnown RBP-0.42□□□□□ -2.48
snR49snR49 SEC22P22214 214 aa-0.42□□□□□ -2.48
snR49snR49 PBN1P25580 416 aa-0.42□□□□□ -2.48
snR49snR49 SWE1P32944 819 aa-0.42□□□□□ -2.48
snR49snR49 EBP2P36049 427 aaKnown RBP-0.42□□□□□ -2.48
snR49snR49 YHR180WP38868 163 aa-0.42□□□□□ -2.48
snR49snR49 RIO2P40160 425 aaKnown RBP-0.42□□□□□ -2.48
snR49snR49 COX16P47081 118 aa-0.42□□□□□ -2.48
snR49snR49 GTO1P48239 356 aa-0.42□□□□□ -2.48
snR49snR49 RPL4BP49626 362 aaKnown RBP-0.42□□□□□ -2.48
snR49snR49 TOS8P53147 276 aa-0.42□□□□□ -2.48
snR49snR49 SLX9P53251 210 aaPredicted RBP-0.42□□□□□ -2.48
snR49snR49 PML1Q07930 204 aaPredicted RBP-0.42□□□□□ -2.48
snR49snR49 NFI1Q12216 726 aa-0.42□□□□□ -2.48
snR49snR49 YPR011CQ12251 326 aa-0.42□□□□□ -2.48
snR49snR49 ATP6P00854 259 aa-0.43□□□□□ -2.48
snR49snR49 RSR1P13856 272 aa-0.43□□□□□ -2.48
snR49snR49 PEX3P28795 441 aa-0.43□□□□□ -2.48
snR49snR49 VMA11P32842 164 aa-0.43□□□□□ -2.48
snR49snR49 YIA6P40556 373 aa-0.43□□□□□ -2.48
snR49snR49 JHD2P47156 728 aaPredicted RBP-0.43□□□□□ -2.48
snR49snR49 PEX31P53203 462 aa-0.43□□□□□ -2.48
snR49snR49 SEC10Q06245 871 aa-0.43□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms