RNA–Protein interactions for RNA: YPL226W

NEW1, Transcript of ATP binding cassette protein, yeast

Gene NEW1, Length 3,591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEW1	YPL226W	NHP6A	P11632	93 aa	Known RBP	2.24	□□□□□ -2.05
NEW1	YPL226W	RPL3	P14126	387 aa	Known RBP	2.24	□□□□□ -2.05
NEW1	YPL226W	SAR1	P20606	190 aa	Known RBP	2.24	□□□□□ -2.05
NEW1	YPL226W	SOF1	P33750	489 aa	Known RBP	2.24	□□□□□ -2.05
NEW1	YPL226W	YHL044W	P38727	235 aa		2.24	□□□□□ -2.05
NEW1	YPL226W	RRP4	P38792	359 aa	Known RBP	2.24	□□□□□ -2.05
NEW1	YPL226W	UIP3	P39547	235 aa		2.24	□□□□□ -2.05
NEW1	YPL226W	SNM1	P40993	198 aa		2.24	□□□□□ -2.05
NEW1	YPL226W	MOG1	P47123	218 aa		2.24	□□□□□ -2.05
NEW1	YPL226W	NSA1	P53136	463 aa	Predicted RBP	2.24	□□□□□ -2.05
NEW1	YPL226W	ERV14	P53173	138 aa		2.24	□□□□□ -2.05
NEW1	YPL226W	OKP1	P53298	406 aa		2.24	□□□□□ -2.05
NEW1	YPL226W	APM1	Q00776	475 aa	Predicted RBP	2.24	□□□□□ -2.05
NEW1	YPL226W	AIM36	Q03798	255 aa		2.24	□□□□□ -2.05
NEW1	YPL226W	DPB4	Q04603	196 aa	Known RBP	2.24	□□□□□ -2.05
NEW1	YPL226W	RRT8	Q08219	342 aa		2.24	□□□□□ -2.05
NEW1	YPL226W	NIP7	Q08962	181 aa	Known RBP	2.24	□□□□□ -2.05
NEW1	YPL226W	REP2	P03872	296 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	TPK3	P05986	398 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	RNA14	P25298	677 aa	Known RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	COS9	P36034	407 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	SRP102	P36057	244 aa	Predicted RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	AVT5	P38176	459 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	TSL1	P38427	1098 aa	Known RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	YHR097C	P38809	366 aa	Known RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	KRE29	P40026	464 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	PRE6	P40303	254 aa	Known RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	YIL012W	P40551	113 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	MOB2	P43563	287 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	ECM27	P47144	725 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	VOA1	P53262	265 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	TNA1	P53322	534 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	YNL181W	P53878	407 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	YAP6	Q03935	383 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	HSP31	Q04432	237 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	HOF1	Q05080	669 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	BTS1	Q12051	335 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	COA6	Q3E846	104 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	PEP4	P07267	405 aa	Known RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	GIT1	P25346	518 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	not detected
NEW1	YPL226W	LDS1	P31379	325 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	APE2	P32454	952 aa	Known RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	MTC2	P34246	357 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	GPX1	P36014	167 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	FIG1	P38224	298 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	YNL195C	P40168	261 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	PGD1	P40356	397 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	POP1	P41812	875 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	NUP57	P48837	541 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	DOC1	P53068	250 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	MPC1	P53157	130 aa	Known RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	MRPS16	Q02608	121 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	YDC1	Q02896	317 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	RTT103	Q05543	409 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	NEJ1	Q06148	342 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	URA2	P07259	2214 aa	Known RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	YCR101C	P25607	182 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	SNC1	P31109	117 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	SAC1	P32368	623 aa	Known RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	RNP1	P32385	249 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	SPT10	P35208	640 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	ELF1	P36053	145 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	MBA1	P38300	278 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	SAE3	P89114	91 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	RCE1	Q03530	315 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	COQ10	Q08058	207 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	DIA2	Q08496	732 aa	Predicted RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	LYS21	Q12122	440 aa	Known RBP	2.23	□□□□□ -2.05
NEW1	YPL226W	RLM1	Q12224	676 aa		2.23	□□□□□ -2.05
NEW1	YPL226W	RPL31A	P0C2H8	113 aa	Known RBP	2.22	□□□□□ -2.05
NEW1	YPL226W	RPL31B	P0C2H9	113 aa	Known RBP	2.22	□□□□□ -2.05
NEW1	YPL226W	YOL163W	P0CF20	169 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	ENA1	P13587	1091 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	APA2	P22108	325 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	PRP21	P32524	280 aa	Predicted RBP	2.22	□□□□□ -2.05
NEW1	YPL226W	TRS65	P32893	560 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	MDL1	P33310	695 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	SKG1	P36169	355 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	SHM2	P37291	469 aa	Known RBP	2.22	□□□□□ -2.05
NEW1	YPL226W	YBR285W	P38354	144 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	FET3	P38993	636 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	SBH2	P52871	88 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	YGL204C	P53089	101 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	YGL101W	P53144	215 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	POP6	P53218	158 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	IGO1	P53897	168 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	ENA2	Q01896	1091 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	MRPL13	Q02204	264 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	MRP51	Q02950	344 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	YPR147C	Q06522	304 aa	Known RBP	2.22	□□□□□ -2.05
NEW1	YPL226W	MHR1	Q06630	226 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	TRM10	Q12400	293 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	YOR343C	Q12484	108 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	ENA5	Q12691	1091 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	SAM35	P14693	329 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	NUP1	P20676	1076 aa		2.22	□□□□□ -2.05
NEW1	YPL226W	IDP1	P21954	428 aa	Known RBP	2.22	□□□□□ -2.05
NEW1	YPL226W	URE2	P23202	354 aa	Known RBP	2.22	□□□□□ -2.05
NEW1	YPL226W	PRP28	P23394	588 aa		2.22	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms