RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W DSN1P40568 576 aa3.18□□□□□ -1.9
VPS28YPL065W OST3P48439 350 aa3.18□□□□□ -1.9
VPS28YPL065W PEX10Q05568 337 aa3.18□□□□□ -1.9
VPS28YPL065W MET2P08465 486 aa3.17□□□□□ -1.9
VPS28YPL065W IME2P32581 645 aa3.17□□□□□ -1.9
VPS28YPL065W SMB1P40018 196 aaKnown RBP3.17□□□□□ -1.9
VPS28YPL065W SPO73P40031 143 aa3.17□□□□□ -1.9
VPS28YPL065W YER084WP40057 128 aa3.17□□□□□ -1.9
VPS28YPL065W YDR209CQ03480 137 aa3.17□□□□□ -1.9
VPS28YPL065W YDR114CQ04597 100 aa3.17□□□□□ -1.9
VPS28YPL065W GLG2P47011 380 aa3.16□□□□□ -1.9
VPS28YPL065W NIF3P53081 288 aa3.16□□□□□ -1.9
VPS28YPL065W SLX9P53251 210 aaPredicted RBP3.16□□□□□ -1.9
VPS28YPL065W TIM22Q12328 207 aa3.16□□□□□ -1.9
VPS28YPL065W YEL009C-AA0A023PZF2 135 aa3.15□□□□□ -1.91
VPS28YPL065W ZWF1P11412 505 aaKnown RBP3.15□□□□□ -1.91
VPS28YPL065W KRE1P17260 313 aa3.15□□□□□ -1.91
VPS28YPL065W VPS3P23643 1011 aa3.15□□□□□ -1.91
VPS28YPL065W EHD3P28817 500 aa3.15□□□□□ -1.91
VPS28YPL065W JEN1P36035 616 aa3.15□□□□□ -1.91
VPS28YPL065W MRX3P38172 270 aa3.15□□□□□ -1.91
VPS28YPL065W HSH155P49955 971 aaKnown RBP3.15□□□□□ -1.91
VPS28YPL065W RLP24Q07915 199 aaKnown RBP3.15□□□□□ -1.91
VPS28YPL065W TY3A-GQ12173 290 aa3.15□□□□□ -1.91
VPS28YPL065W MSH5Q12175 901 aa3.15□□□□□ -1.91
VPS28YPL065W ISD11Q6Q560 94 aa3.15□□□□□ -1.91
VPS28YPL065W TY3A-IQ99219 290 aa3.15□□□□□ -1.91
VPS28YPL065W TDH2P00358 332 aaKnown RBP3.14□□□□□ -1.91
VPS28YPL065W HIS3P06633 220 aa3.14□□□□□ -1.91
VPS28YPL065W POX1P13711 748 aa3.14□□□□□ -1.91
VPS28YPL065W YJL144WP47009 104 aa3.14□□□□□ -1.91
VPS28YPL065W YJL028WP47062 111 aa3.14□□□□□ -1.91
VPS28YPL065W AAH1P53909 347 aa3.14□□□□□ -1.91
VPS28YPL065W CTF19Q02732 369 aa3.14□□□□□ -1.91
VPS28YPL065W FCF1Q05498 189 aaPredicted RBP3.14□□□□□ -1.91
VPS28YPL065W MED4Q12343 284 aa3.14□□□□□ -1.91
VPS28YPL065W ATG31Q12421 196 aa3.14□□□□□ -1.91
VPS28YPL065W TOM40P23644 387 aaKnown RBP3.13□□□□□ -1.91
VPS28YPL065W MIG1P27705 504 aa3.13□□□□□ -1.91
VPS28YPL065W SDH4P37298 181 aa3.13□□□□□ -1.91
VPS28YPL065W YBR096WP38256 230 aa3.13□□□□□ -1.91
VPS28YPL065W YGL088WP53151 121 aa3.13□□□□□ -1.91
VPS28YPL065W ASI3P53983 676 aa3.13□□□□□ -1.91
VPS28YPL065W FEX1Q08913 375 aa3.13□□□□□ -1.91
VPS28YPL065W FEX2Q08991 375 aa3.13□□□□□ -1.91
VPS28YPL065W RNA15P25299 296 aaPredicted RBP3.12□□□□□ -1.91
VPS28YPL065W HOM6P31116 359 aaKnown RBP3.12□□□□□ -1.91
VPS28YPL065W AGX1P43567 385 aa3.12□□□□□ -1.91
VPS28YPL065W PIR5P46999 287 aa3.12□□□□□ -1.91
VPS28YPL065W EMI1Q04406 187 aa3.12□□□□□ -1.91
VPS28YPL065W SNF8Q12483 233 aa3.12□□□□□ -1.91
VPS28YPL065W YPL247CQ12523 523 aa3.12□□□□□ -1.91
VPS28YPL065W TCP1P12612 559 aaKnown RBP3.11□□□□□ -1.91
VPS28YPL065W CAB3P36076 571 aa3.11□□□□□ -1.91
VPS28YPL065W YER188WP40103 239 aa3.11□□□□□ -1.91
VPS28YPL065W SNZ3P43545 298 aa3.11□□□□□ -1.91
VPS28YPL065W YGL034CP53186 121 aa3.11□□□□□ -1.91
VPS28YPL065W PAM18Q07914 168 aa3.11□□□□□ -1.91
VPS28YPL065W HRT1Q08273 121 aa3.11□□□□□ -1.91
VPS28YPL065W AGC1Q12482 902 aa3.11□□□□□ -1.91
VPS28YPL065W NOT5Q12514 560 aaPredicted RBP3.11□□□□□ -1.91
VPS28YPL065W YPR096CO13587 100 aa3.1□□□□□ -1.91
VPS28YPL065W DPB2P24482 689 aaPredicted RBP3.1□□□□□ -1.91
VPS28YPL065W BMH1P29311 267 aaKnown RBP3.1□□□□□ -1.91
VPS28YPL065W USE1P53146 245 aa3.1□□□□□ -1.91
VPS28YPL065W PET117Q02771 107 aa3.1□□□□□ -1.91
VPS28YPL065W SRL4Q03085 281 aa3.1□□□□□ -1.91
VPS28YPL065W BOP2Q06150 570 aa3.1□□□□□ -1.91
VPS28YPL065W YPR147CQ06522 304 aaKnown RBP3.1□□□□□ -1.91
VPS28YPL065W COQ10Q08058 207 aa3.1□□□□□ -1.91
VPS28YPL065W YPR011CQ12251 326 aa3.1□□□□□ -1.91
VPS28YPL065W RAD10P06838 210 aa3.09□□□□□ -1.91
VPS28YPL065W SFC1P33303 322 aa3.09□□□□□ -1.91
VPS28YPL065W JHD2P47156 728 aaPredicted RBP3.09□□□□□ -1.91
VPS28YPL065W MDM34P53083 459 aa3.09□□□□□ -1.91
VPS28YPL065W YPR098CQ06089 161 aa3.09□□□□□ -1.91
VPS28YPL065W ATG17Q06410 417 aa3.09□□□□□ -1.91
VPS28YPL065W YBL008W-AQ3E821 79 aa3.09□□□□□ -1.91
VPS28YPL065W CFT1Q06632 1357 aaKnown RBP3.09□□□□□ -1.92
VPS28YPL065W RSA4P25382 515 aaKnown RBP3.08□□□□□ -1.92
VPS28YPL065W GDH2P33327 1092 aaKnown RBP3.08□□□□□ -1.92
VPS28YPL065W MAL32P38158 584 aa3.08□□□□□ -1.92
VPS28YPL065W TEM1P38987 245 aa3.08□□□□□ -1.92
VPS28YPL065W FMC1P40491 155 aa3.08□□□□□ -1.92
VPS28YPL065W NUP84P52891 726 aa3.08□□□□□ -1.92
VPS28YPL065W MAL12P53341 584 aa3.08□□□□□ -1.92
VPS28YPL065W CSM4Q08955 156 aa3.08□□□□□ -1.92
VPS28YPL065W SMT3Q12306 101 aaKnown RBP3.08□□□□□ -1.92
VPS28YPL065W YKR104WP0CE69 306 aa3.07□□□□□ -1.92
VPS28YPL065W ECM13P38195 257 aa3.07□□□□□ -1.92
VPS28YPL065W LDB7P38210 180 aa3.07□□□□□ -1.92
VPS28YPL065W GOS1P38736 223 aa3.07□□□□□ -1.92
VPS28YPL065W HOC1P47124 396 aa3.07□□□□□ -1.92
VPS28YPL065W SSU72P53538 206 aaPredicted RBP3.07□□□□□ -1.92
VPS28YPL065W MRPL50P53724 139 aa3.07□□□□□ -1.92
VPS28YPL065W SNZ2P53824 298 aa3.07□□□□□ -1.92
VPS28YPL065W MYO5Q04439 1219 aaKnown RBP3.07□□□□□ -1.92
VPS28YPL065W SLD7Q08457 257 aa3.07□□□□□ -1.92
VPS28YPL065W CLP1Q08685 445 aaPredicted RBP3.07□□□□□ -1.92
VPS28YPL065W RRS1Q08746 203 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms