RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C RRF1P38771 230 aa2.97□□□□□ -1.93
RPA43YOR340C SBE22P38814 852 aa2.97□□□□□ -1.93
RPA43YOR340C COX14P39103 70 aa2.97□□□□□ -1.93
RPA43YOR340C MTW1P39731 289 aa2.97□□□□□ -1.93
RPA43YOR340C YNL208WP40159 199 aaKnown RBP2.97□□□□□ -1.93
RPA43YOR340C ALB1P47019 175 aaPredicted RBP2.97□□□□□ -1.93
RPA43YOR340C TMA22P47089 198 aaPredicted RBP2.97□□□□□ -1.93
RPA43YOR340C GIS2P53849 153 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
RPA43YOR340C SUR7P54003 302 aa2.97□□□□□ -1.93
RPA43YOR340C ABZ2Q03266 374 aa2.97□□□□□ -1.93
RPA43YOR340C YDR209CQ03480 137 aa2.97□□□□□ -1.93
RPA43YOR340C INP1Q03694 420 aa2.97□□□□□ -1.93
RPA43YOR340C DYN3Q04949 312 aa2.97□□□□□ -1.93
RPA43YOR340C ARR1Q06596 294 aa2.97□□□□□ -1.93
RPA43YOR340C YOL024WQ08172 172 aa2.97□□□□□ -1.93
RPA43YOR340C YOR376WQ08900 122 aa2.97□□□□□ -1.93
RPA43YOR340C RPN6Q12377 434 aa2.97□□□□□ -1.93
RPA43YOR340C PRP46Q12417 451 aaPredicted RBP2.97□□□□□ -1.93
RPA43YOR340C RRP36Q12481 300 aaPredicted RBP2.97□□□□□ -1.93
RPA43YOR340C YER078W-AQ3E7A2 54 aa2.97□□□□□ -1.93
RPA43YOR340C IPP1P00817 287 aaKnown RBP2.96□□□□□ -1.94
RPA43YOR340C CYC3P06182 269 aa2.96□□□□□ -1.94
RPA43YOR340C YSF3P0C074 85 aaPredicted RBP2.96□□□□□ -1.94
RPA43YOR340C RPS16AP0CX51 143 aaKnown RBP2.96□□□□□ -1.94
RPA43YOR340C RPS16BP0CX52 143 aaKnown RBP2.96□□□□□ -1.94
RPA43YOR340C CBS2P14905 389 aa2.96□□□□□ -1.94
RPA43YOR340C RPB5P20434 215 aa2.96□□□□□ -1.94
RPA43YOR340C GRR1P24814 1151 aa2.96□□□□□ -1.94
RPA43YOR340C RVS161P25343 265 aaKnown RBP2.96□□□□□ -1.94
RPA43YOR340C HSP150P32478 413 aa2.96□□□□□ -1.94
RPA43YOR340C GPX2P38143 162 aa2.96□□□□□ -1.94
RPA43YOR340C TRR2P38816 342 aa2.96□□□□□ -1.94
RPA43YOR340C PTI1P39927 425 aaPredicted RBP2.96□□□□□ -1.94
RPA43YOR340C ABM1P47146 123 aa2.96□□□□□ -1.94
RPA43YOR340C PAC10P48363 199 aa2.96□□□□□ -1.94
RPA43YOR340C GPI8P49018 411 aa2.96□□□□□ -1.94
RPA43YOR340C COS1P53822 381 aa2.96□□□□□ -1.94
RPA43YOR340C IGO1P53897 168 aa2.96□□□□□ -1.94
RPA43YOR340C YDR476CQ03362 224 aa2.96□□□□□ -1.94
RPA43YOR340C SEI1Q06058 285 aa2.96□□□□□ -1.94
RPA43YOR340C GMC2Q06201 188 aa2.96□□□□□ -1.94
RPA43YOR340C MDM36Q06820 579 aa2.96□□□□□ -1.94
RPA43YOR340C SPO24Q3E752 67 aa2.96□□□□□ -1.94
RPA43YOR340C FSH3Q99369 266 aa2.96□□□□□ -1.94
RPA43YOR340C BLM10P43583 2143 aa2.96□□□□□ -1.94
RPA43YOR340C MER1P16523 270 aa2.95□□□□□ -1.94
RPA43YOR340C HXT2P23585 541 aa2.95□□□□□ -1.94
RPA43YOR340C YCR102CP25608 368 aa2.95□□□□□ -1.94
RPA43YOR340C CSM1P25651 190 aa2.95□□□□□ -1.94
RPA43YOR340C DPH5P32469 300 aaPredicted RBP2.95□□□□□ -1.94
RPA43YOR340C NUP2P32499 720 aa2.95□□□□□ -1.94
RPA43YOR340C GEP4P38812 185 aa2.95□□□□□ -1.94
RPA43YOR340C YHR122WP38829 231 aa2.95□□□□□ -1.94
RPA43YOR340C TDA11P38854 504 aa2.95□□□□□ -1.94
RPA43YOR340C ALP1P38971 573 aa2.95□□□□□ -1.94
RPA43YOR340C MAM33P40513 266 aa2.95□□□□□ -1.94
RPA43YOR340C YIL029CP40538 142 aa2.95□□□□□ -1.94
RPA43YOR340C KEL2P50090 882 aa2.95□□□□□ -1.94
RPA43YOR340C SEH1P53011 349 aaKnown RBP2.95□□□□□ -1.94
RPA43YOR340C MIG2P53035 382 aa2.95□□□□□ -1.94
RPA43YOR340C SYF2P53277 215 aaPredicted RBP2.95□□□□□ -1.94
RPA43YOR340C MTQ1P53944 314 aa2.95□□□□□ -1.94
RPA43YOR340C YNL033WP53964 284 aa2.95□□□□□ -1.94
RPA43YOR340C YNL019CP53975 284 aa2.95□□□□□ -1.94
RPA43YOR340C SKI8Q02793 397 aaPredicted RBP2.95□□□□□ -1.94
RPA43YOR340C SMP3Q04174 516 aa2.95□□□□□ -1.94
RPA43YOR340C YPR091CQ06833 770 aa2.95□□□□□ -1.94
RPA43YOR340C NDE2Q07500 545 aa2.95□□□□□ -1.94
RPA43YOR340C YLL007CQ07799 665 aa2.95□□□□□ -1.94
RPA43YOR340C FDH1Q08911 376 aa2.95□□□□□ -1.94
RPA43YOR340C NSL1Q12143 216 aa2.95□□□□□ -1.94
RPA43YOR340C MDM32Q12171 622 aa2.95□□□□□ -1.94
RPA43YOR340C THP2O13539 261 aaKnown RBP2.94□□□□□ -1.94
RPA43YOR340C VAM7P32912 316 aa2.94□□□□□ -1.94
RPA43YOR340C TIR2P33890 251 aa2.94□□□□□ -1.94
RPA43YOR340C MNN9P39107 395 aaKnown RBP2.94□□□□□ -1.94
RPA43YOR340C YFR054CP43622 192 aa2.94□□□□□ -1.94
RPA43YOR340C RPE1P46969 238 aa2.94□□□□□ -1.94
RPA43YOR340C YJR141WP47172 347 aaPredicted RBP2.94□□□□□ -1.94
RPA43YOR340C YGL114WP53134 725 aa2.94□□□□□ -1.94
RPA43YOR340C MTM1P53320 366 aa2.94□□□□□ -1.94
RPA43YOR340C NUP116Q02630 1113 aa2.94□□□□□ -1.94
RPA43YOR340C NAT4Q04751 285 aa2.94□□□□□ -1.94
RPA43YOR340C PAL1Q05518 499 aaKnown RBP2.94□□□□□ -1.94
RPA43YOR340C PBA1Q05778 276 aa2.94□□□□□ -1.94
RPA43YOR340C GGA1Q06336 557 aa2.94□□□□□ -1.94
RPA43YOR340C YPR172WQ06608 200 aa2.94□□□□□ -1.94
RPA43YOR340C MFG1Q07684 458 aa2.94□□□□□ -1.94
RPA43YOR340C ERV2Q12284 196 aa2.94□□□□□ -1.94
RPA43YOR340C WTM1Q12363 437 aaKnown RBP2.94□□□□□ -1.94
RPA43YOR340C YCR024C-BQ3E7Z8 88 aa2.94□□□□□ -1.94
RPA43YOR340C VPS63O13549 108 aa2.93□□□□□ -1.94
RPA43YOR340C RPL43AP0CX25 92 aaKnown RBP2.93□□□□□ -1.94
RPA43YOR340C RPL43BP0CX26 92 aa2.93□□□□□ -1.94
RPA43YOR340C ZWF1P11412 505 aaKnown RBP2.93□□□□□ -1.94
RPA43YOR340C GAL3P13045 520 aa2.93□□□□□ -1.94
RPA43YOR340C CTA1P15202 515 aa2.93□□□□□ -1.94
RPA43YOR340C RPS1BP23248 255 aaKnown RBP2.93□□□□□ -1.94
RPA43YOR340C VPS51P36116 164 aa2.93□□□□□ -1.94
RPA43YOR340C SKG1P36169 355 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms