RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W RPL4AP10664 362 aaKnown RBP2.24□□□□□ -2.05
VAM3YOR106W YCR102CP25608 368 aa2.24□□□□□ -2.05
VAM3YOR106W FCY21P40039 528 aa2.24□□□□□ -2.05
VAM3YOR106W RPL4BP49626 362 aaKnown RBP2.24□□□□□ -2.05
VAM3YOR106W TIM21P53220 239 aa2.24□□□□□ -2.05
VAM3YOR106W PEX12Q04370 399 aa2.24□□□□□ -2.05
VAM3YOR106W GEP5Q12393 293 aa2.24□□□□□ -2.05
VAM3YOR106W AI5_BETAQ9ZZX0 354 aa2.24□□□□□ -2.05
VAM3YOR106W RPC40P07703 335 aaKnown RBP2.23□□□□□ -2.05
VAM3YOR106W COS2P0CX12 379 aa2.23□□□□□ -2.05
VAM3YOR106W COS3P0CX13 379 aa2.23□□□□□ -2.05
VAM3YOR106W PPH21P23594 369 aa2.23□□□□□ -2.05
VAM3YOR106W MDM34P53083 459 aa2.23□□□□□ -2.05
VAM3YOR106W EBS1Q03466 884 aaKnown RBP2.23□□□□□ -2.05
VAM3YOR106W ERV41Q04651 352 aa2.23□□□□□ -2.05
VAM3YOR106W BOP2Q06150 570 aa2.23□□□□□ -2.05
VAM3YOR106W SLD7Q08457 257 aa2.23□□□□□ -2.05
VAM3YOR106W FRS2P15625 503 aaKnown RBP2.22□□□□□ -2.05
VAM3YOR106W YSR3P23501 404 aa2.22□□□□□ -2.05
VAM3YOR106W SHC1P39000 512 aa2.22□□□□□ -2.05
VAM3YOR106W ATC1Q04005 294 aa2.22□□□□□ -2.05
VAM3YOR106W HEK2P38199 381 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06 RIP-Chip
VAM3YOR106W GCD14P46959 383 aaPredicted RBP2.21□□□□□ -2.06
VAM3YOR106W SCM4P32564 187 aa2.2□□□□□ -2.06
VAM3YOR106W YGL185CP53100 379 aa2.2□□□□□ -2.06
VAM3YOR106W ARP5P53946 755 aa2.2□□□□□ -2.06
VAM3YOR106W SAS5Q99314 248 aa2.2□□□□□ -2.06
VAM3YOR106W PUT1P09368 476 aa2.19□□□□□ -2.06
VAM3YOR106W POF1P25576 258 aa2.19□□□□□ -2.06
VAM3YOR106W CWP1P28319 239 aa2.19□□□□□ -2.06
VAM3YOR106W YHL049CP38722 271 aa2.19□□□□□ -2.06
VAM3YOR106W PRM9P39551 298 aa2.19□□□□□ -2.06
VAM3YOR106W MRX5P47007 382 aa2.19□□□□□ -2.06
VAM3YOR106W AAH1P53909 347 aa2.19□□□□□ -2.06
VAM3YOR106W MEK1P24719 497 aaPredicted RBP2.18□□□□□ -2.06
VAM3YOR106W DOA4P32571 926 aa2.18□□□□□ -2.06
VAM3YOR106W EMI1Q04406 187 aa2.18□□□□□ -2.06
VAM3YOR106W PEX10Q05568 337 aa2.18□□□□□ -2.06
VAM3YOR106W MRPL40P36534 297 aa2.17□□□□□ -2.06
VAM3YOR106W ECM13P38195 257 aa2.17□□□□□ -2.06
VAM3YOR106W LSM4P40070 187 aaKnown RBP2.17□□□□□ -2.06
VAM3YOR106W SNX4P47057 423 aa2.17□□□□□ -2.06
VAM3YOR106W NBP35P52920 328 aa2.17□□□□□ -2.06
VAM3YOR106W BOL1Q3E793 110 aa2.17□□□□□ -2.06
VAM3YOR106W STH1P32597 1359 aa2.16□□□□□ -2.06
VAM3YOR106W RPP0P05317 312 aaKnown RBP2.16□□□□□ -2.06
VAM3YOR106W HSM3P38348 480 aa2.16□□□□□ -2.06
VAM3YOR106W RPL10P41805 221 aaKnown RBP2.16□□□□□ -2.06
VAM3YOR106W SWS2P53937 143 aa2.16□□□□□ -2.06
VAM3YOR106W CDC14Q00684 551 aa2.16□□□□□ -2.06
VAM3YOR106W CTR3Q06686 241 aa2.16□□□□□ -2.06
VAM3YOR106W MHT1Q12525 324 aa2.16□□□□□ -2.06
VAM3YOR106W YIL002W-AQ3E7Z5 69 aa2.16□□□□□ -2.06
VAM3YOR106W LSB1P53281 241 aa2.15□□□□□ -2.07
VAM3YOR106W MNT4P53745 580 aa2.15□□□□□ -2.07
VAM3YOR106W SPP2Q02521 185 aa2.15□□□□□ -2.07
VAM3YOR106W ARV1Q06541 321 aa2.15□□□□□ -2.07
VAM3YOR106W YLR413WQ06689 675 aa2.15□□□□□ -2.07
VAM3YOR106W MRPL23Q12487 163 aaPredicted RBP2.15□□□□□ -2.07
VAM3YOR106W CCA1P21269 546 aa2.14□□□□□ -2.07
VAM3YOR106W FMP16Q12497 93 aa2.14□□□□□ -2.07
VAM3YOR106W OST2P46964 130 aa2.13□□□□□ -2.07
VAM3YOR106W FMP33P46998 180 aa2.13□□□□□ -2.07
VAM3YOR106W ASI3P53983 676 aa2.13□□□□□ -2.07
VAM3YOR106W SGA1P08019 549 aa2.12□□□□□ -2.07
VAM3YOR106W PRM15Q03262 622 aa2.12□□□□□ -2.07
VAM3YOR106W YPR011CQ12251 326 aa2.12□□□□□ -2.07
VAM3YOR106W SME1Q12330 94 aaPredicted RBP2.12□□□□□ -2.07
VAM3YOR106W MET16P18408 261 aaPredicted RBP2.11□□□□□ -2.07
VAM3YOR106W AYR1P40471 297 aa2.11□□□□□ -2.07
VAM3YOR106W DAD3P69850 94 aa2.11□□□□□ -2.07
VAM3YOR106W RSM10Q03201 203 aa2.11□□□□□ -2.07
VAM3YOR106W YBL008W-AQ3E821 79 aa2.11□□□□□ -2.07
VAM3YOR106W YKL070WP36087 169 aa2.1□□□□□ -2.07
VAM3YOR106W PEX18P38855 283 aa2.1□□□□□ -2.07
VAM3YOR106W YHB1P39676 399 aaKnown RBP2.1□□□□□ -2.07
VAM3YOR106W SSH1P38353 490 aaKnown RBP2.09□□□□□ -2.07
VAM3YOR106W EGD1Q02642 157 aaKnown RBP2.09□□□□□ -2.07
VAM3YOR106W GMC2Q06201 188 aa2.09□□□□□ -2.07
VAM3YOR106W POX1P13711 748 aa2.08□□□□□ -2.08
VAM3YOR106W DBP3P20447 523 aaKnown RBP2.08□□□□□ -2.08
VAM3YOR106W SEC22P22214 214 aa2.08□□□□□ -2.08
VAM3YOR106W DAL80P26343 269 aa2.08□□□□□ -2.08
VAM3YOR106W RCN1P36054 211 aa2.08□□□□□ -2.08
VAM3YOR106W SSK22P25390 1331 aaPredicted RBP2.08□□□□□ -2.08
VAM3YOR106W DDI1P40087 428 aa2.07□□□□□ -2.08
VAM3YOR106W YJR012CP47087 207 aa2.07□□□□□ -2.08
VAM3YOR106W MAL13P53338 473 aa2.07□□□□□ -2.08
VAM3YOR106W BBP1Q12365 385 aa2.07□□□□□ -2.08
VAM3YOR106W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
VAM3YOR106W PRS4P38063 326 aaPredicted RBP2.06□□□□□ -2.08
VAM3YOR106W COS8P38723 381 aa2.06□□□□□ -2.08
VAM3YOR106W COA1P40452 197 aa2.06□□□□□ -2.08
VAM3YOR106W ARC15P40518 154 aaRIP-Chip data2.06□□□□□ -2.08not detected
VAM3YOR106W EMP46Q12396 444 aa2.06□□□□□ -2.08
VAM3YOR106W HIS1P00498 297 aaKnown RBP2.05□□□□□ -2.08
VAM3YOR106W PEP8P40335 379 aa2.05□□□□□ -2.08
VAM3YOR106W YPL119C-AQ3E751 87 aa2.05□□□□□ -2.08
VAM3YOR106W SSA3P09435 649 aaKnown RBP2.04□□□□□ -2.08
VAM3YOR106W YHR032W-AP0C5N6 59 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms