RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W MPA43P53583 542 aaPredicted RBP3.94□□□□□ -1.78
RRP40YOL142W YNL095CP53932 642 aa3.94□□□□□ -1.78
RRP40YOL142W MTQ1P53944 314 aa3.94□□□□□ -1.78
RRP40YOL142W ATG38Q05789 226 aaKnown RBP3.94□□□□□ -1.78
RRP40YOL142W RRP9Q06506 573 aaKnown RBP3.94□□□□□ -1.78
RRP40YOL142W YPR172WQ06608 200 aa3.94□□□□□ -1.78
RRP40YOL142W RRT8Q08219 342 aa3.94□□□□□ -1.78
RRP40YOL142W DCI1Q08558 271 aa3.94□□□□□ -1.78
RRP40YOL142W RAX1Q08760 435 aa3.94□□□□□ -1.78
RRP40YOL142W AKR2Q12013 749 aa3.94□□□□□ -1.78
RRP40YOL142W YDL199CQ12407 687 aa3.94□□□□□ -1.78
RRP40YOL142W PFK27Q12471 397 aaPredicted RBP3.94□□□□□ -1.78
RRP40YOL142W ADF1Q2V2Q1 113 aa3.94□□□□□ -1.78
RRP40YOL142W MTR10Q99189 972 aa3.94□□□□□ -1.78
RRP40YOL142W TRA1P38811 3744 aa3.94□□□□□ -1.78
RRP40YOL142W MEC1P38111 2368 aa3.94□□□□□ -1.78
RRP40YOL142W YSF3P0C074 85 aaPredicted RBP3.93□□□□□ -1.78
RRP40YOL142W NAM2P11325 894 aa3.93□□□□□ -1.78
RRP40YOL142W GPI12P23797 304 aa3.93□□□□□ -1.78
RRP40YOL142W PCL1P24867 279 aa3.93□□□□□ -1.78
RRP40YOL142W YOR062CP36025 268 aa3.93□□□□□ -1.78
RRP40YOL142W ZTA1P38230 334 aaKnown RBP3.93□□□□□ -1.78
RRP40YOL142W AIM10P39965 576 aaKnown RBP3.93□□□□□ -1.78
RRP40YOL142W YIL029CP40538 142 aa3.93□□□□□ -1.78
RRP40YOL142W CUP9P41817 306 aa3.93□□□□□ -1.78
RRP40YOL142W RPS12P48589 143 aaKnown RBP3.93□□□□□ -1.78
RRP40YOL142W RMR1P53060 241 aa3.93□□□□□ -1.78
RRP40YOL142W HAL1Q01766 294 aa3.93□□□□□ -1.78
RRP40YOL142W TSA2Q04120 196 aa3.93□□□□□ -1.78
RRP40YOL142W PEX12Q04370 399 aa3.93□□□□□ -1.78
RRP40YOL142W SPO77Q06134 477 aa3.93□□□□□ -1.78
RRP40YOL142W REX3Q12090 404 aa3.93□□□□□ -1.78
RRP40YOL142W IZH2Q12442 317 aa3.93□□□□□ -1.78
RRP40YOL142W PAR32Q12515 295 aaKnown RBP3.93□□□□□ -1.78
RRP40YOL142W MHF2Q3E829 80 aa3.93□□□□□ -1.78
RRP40YOL142W YAK1P14680 807 aa3.92□□□□□ -1.78
RRP40YOL142W ARO3P14843 370 aaKnown RBP3.92□□□□□ -1.78
RRP40YOL142W PBN1P25580 416 aa3.92□□□□□ -1.78
RRP40YOL142W VPS51P36116 164 aa3.92□□□□□ -1.78
RRP40YOL142W SIM1P40472 476 aa3.92□□□□□ -1.78
RRP40YOL142W YGR201CP42936 225 aa3.92□□□□□ -1.78
RRP40YOL142W YJR141WP47172 347 aaPredicted RBP3.92□□□□□ -1.78
RRP40YOL142W SWP1Q02795 286 aa3.92□□□□□ -1.78
RRP40YOL142W NAT4Q04751 285 aa3.92□□□□□ -1.78
RRP40YOL142W YLR345WQ06137 509 aa3.92□□□□□ -1.78
RRP40YOL142W YOR376WQ08900 122 aa3.92□□□□□ -1.78
RRP40YOL142W YDL211CQ12121 372 aa3.92□□□□□ -1.78
RRP40YOL142W TPO4Q12256 659 aa3.92□□□□□ -1.78
RRP40YOL142W TIM9O74700 87 aa3.91□□□□□ -1.78
RRP40YOL142W AST1P35183 429 aa3.91□□□□□ -1.78
RRP40YOL142W BIG1P38813 335 aa3.91□□□□□ -1.78
RRP40YOL142W COX14P39103 70 aa3.91□□□□□ -1.78
RRP40YOL142W RCY1P39531 840 aa3.91□□□□□ -1.78
RRP40YOL142W SER3P40054 469 aa3.91□□□□□ -1.78
RRP40YOL142W GAT2P40209 560 aa3.91□□□□□ -1.78
RRP40YOL142W VHS2P40463 436 aa3.91□□□□□ -1.78
RRP40YOL142W AGP3P43548 558 aa3.91□□□□□ -1.78
RRP40YOL142W FMP33P46998 180 aa3.91□□□□□ -1.78
RRP40YOL142W APS3P47064 194 aa3.91□□□□□ -1.78
RRP40YOL142W GPI8P49018 411 aa3.91□□□□□ -1.78
RRP40YOL142W TOS2P50078 622 aa3.91□□□□□ -1.78
RRP40YOL142W SEH1P53011 349 aaKnown RBP3.91□□□□□ -1.78
RRP40YOL142W SYF2P53277 215 aaPredicted RBP3.91□□□□□ -1.78
RRP40YOL142W COS6P53344 381 aa3.91□□□□□ -1.78
RRP40YOL142W STD1Q02794 444 aa3.91□□□□□ -1.78
RRP40YOL142W NCE101Q02820 53 aa3.91□□□□□ -1.78
RRP40YOL142W YPL107WQ02873 248 aa3.91□□□□□ -1.78
RRP40YOL142W YDR541CQ03049 344 aa3.91□□□□□ -1.78
RRP40YOL142W INP1Q03694 420 aa3.91□□□□□ -1.78
RRP40YOL142W SEI1Q06058 285 aa3.91□□□□□ -1.78
RRP40YOL142W NDE2Q07500 545 aa3.91□□□□□ -1.78
RRP40YOL142W YOL024WQ08172 172 aa3.91□□□□□ -1.78
RRP40YOL142W YOR342CQ12182 319 aa3.91□□□□□ -1.78
RRP40YOL142W SFM1Q12314 213 aa3.91□□□□□ -1.78
RRP40YOL142W PSY3Q12318 242 aa3.91□□□□□ -1.78
RRP40YOL142W PSF1Q12488 208 aa3.91□□□□□ -1.78
RRP40YOL142W KSS1P14681 368 aa3.9□□□□□ -1.79
RRP40YOL142W DBP3P20447 523 aaKnown RBP3.9□□□□□ -1.79
RRP40YOL142W CPR2P23285 205 aa3.9□□□□□ -1.79
RRP40YOL142W IDH1P28834 360 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
RRP40YOL142W NTG1P31378 399 aa3.9□□□□□ -1.79
RRP40YOL142W ALP1P38971 573 aa3.9□□□□□ -1.79
RRP40YOL142W RBG1P39729 369 aa3.9□□□□□ -1.79
RRP40YOL142W PRE6P40303 254 aaKnown RBP3.9□□□□□ -1.79
RRP40YOL142W ILM1P47155 203 aa3.9□□□□□ -1.79
RRP40YOL142W YGR016WP53209 190 aa3.9□□□□□ -1.79
RRP40YOL142W YLR460CP54007 376 aa3.9□□□□□ -1.79
RRP40YOL142W SKI8Q02793 397 aaPredicted RBP3.9□□□□□ -1.79
RRP40YOL142W RRN5Q02983 363 aa3.9□□□□□ -1.79
RRP40YOL142W RNH202Q05635 350 aa3.9□□□□□ -1.79
RRP40YOL142W DBP9Q06218 594 aaKnown RBP3.9□□□□□ -1.79
RRP40YOL142W PRP46Q12417 451 aaPredicted RBP3.9□□□□□ -1.79
RRP40YOL142W MRX4Q12467 430 aa3.9□□□□□ -1.79
RRP40YOL142W SNF4P12904 322 aa3.89□□□□□ -1.79
RRP40YOL142W YCR102CP25608 368 aa3.89□□□□□ -1.79
RRP40YOL142W HSP150P32478 413 aa3.89□□□□□ -1.79
RRP40YOL142W ATP3P38077 311 aaKnown RBP3.89□□□□□ -1.79
RRP40YOL142W OM14P38325 134 aa3.89□□□□□ -1.79
RRP40YOL142W ECM34P38728 170 aa3.89□□□□□ -1.79
RRP40YOL142W SNL1P40548 159 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 84 ms