RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W SYS1P41544 203 aa5.23□□□□□ -1.57
ATG4YNL223W AIM25P47140 327 aa5.23□□□□□ -1.57
ATG4YNL223W PCP1P53259 346 aa5.23□□□□□ -1.57
ATG4YNL223W SCW4P53334 386 aaKnown RBP5.23□□□□□ -1.57
ATG4YNL223W GAS2Q06135 555 aa5.23□□□□□ -1.57
ATG4YNL223W RRI1Q12468 440 aa5.23□□□□□ -1.57
ATG4YNL223W YLR358CO13565 187 aa5.22□□□□□ -1.57
ATG4YNL223W RAD52P06778 471 aaKnown RBP5.22□□□□□ -1.57
ATG4YNL223W SGA1P08019 549 aa5.22□□□□□ -1.57
ATG4YNL223W NHP6BP11633 99 aaKnown RBP5.22□□□□□ -1.57
ATG4YNL223W SAR1P20606 190 aaKnown RBP5.22□□□□□ -1.57
ATG4YNL223W PCL1P24867 279 aa5.22□□□□□ -1.57
ATG4YNL223W YCP4P25349 247 aaKnown RBP5.22□□□□□ -1.57
ATG4YNL223W PET18P25362 215 aa5.22□□□□□ -1.57
ATG4YNL223W DBF20P32328 564 aa5.22□□□□□ -1.57
ATG4YNL223W SNC2P33328 115 aa5.22□□□□□ -1.57
ATG4YNL223W UTP30P36144 274 aaKnown RBP5.22□□□□□ -1.57
ATG4YNL223W BUD8P41698 603 aa5.22□□□□□ -1.57
ATG4YNL223W ERJ5P43613 295 aaPredicted RBP5.22□□□□□ -1.57
ATG4YNL223W ADO1P47143 340 aaKnown RBP5.22□□□□□ -1.57
ATG4YNL223W POP6P53218 158 aa5.22□□□□□ -1.57
ATG4YNL223W YGR042WP53227 271 aa5.22□□□□□ -1.57
ATG4YNL223W SLI1P53304 468 aa5.22□□□□□ -1.57
ATG4YNL223W AAH1P53909 347 aa5.22□□□□□ -1.57
ATG4YNL223W CTF19Q02732 369 aa5.22□□□□□ -1.57
ATG4YNL223W UTP15Q04305 513 aaKnown RBP5.22□□□□□ -1.57
ATG4YNL223W CHO1P08456 276 aa5.21□□□□□ -1.58
ATG4YNL223W RPL3P14126 387 aaKnown RBP5.21□□□□□ -1.58
ATG4YNL223W CDC23P16522 626 aa5.21□□□□□ -1.58
ATG4YNL223W STF2P16965 84 aa5.21□□□□□ -1.58
ATG4YNL223W RNA14P25298 677 aaKnown RBP5.21□□□□□ -1.58
ATG4YNL223W TAT1P38085 619 aa5.21□□□□□ -1.58
ATG4YNL223W TCM62P38228 572 aaKnown RBP5.21□□□□□ -1.58
ATG4YNL223W CIN2P46670 268 aa5.21□□□□□ -1.58
ATG4YNL223W UBX6P47049 396 aa5.21□□□□□ -1.58
ATG4YNL223W LOH1P47055 219 aa5.21□□□□□ -1.58
ATG4YNL223W GPI14P47088 403 aaKnown RBP5.21□□□□□ -1.58
ATG4YNL223W NGL2Q03264 515 aaKnown RBP5.21□□□□□ -1.58
ATG4YNL223W YMR265CQ03508 461 aaKnown RBP5.21□□□□□ -1.58
ATG4YNL223W RVB1Q03940 463 aaKnown RBP5.21□□□□□ -1.58
ATG4YNL223W TY1A-MR1Q04215 440 aa5.21□□□□□ -1.58
ATG4YNL223W RSC58Q07979 502 aa5.21□□□□□ -1.58
ATG4YNL223W FRE3Q08905 711 aa5.21□□□□□ -1.58
ATG4YNL223W Q0144Q9ZZW2 109 aa5.21□□□□□ -1.58
ATG4YNL223W MES1P00958 751 aaKnown RBP5.2□□□□□ -1.58
ATG4YNL223W RPL6BP05739 176 aaKnown RBP5.2□□□□□ -1.58
ATG4YNL223W CBP6P07253 162 aaPredicted RBP5.2□□□□□ -1.58
ATG4YNL223W DIT1P21623 536 aa5.2□□□□□ -1.58
ATG4YNL223W SED4P25365 1065 aa5.2□□□□□ -1.58
ATG4YNL223W NAB2P32505 525 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
ATG4YNL223W MTC7P32633 139 aa5.2□□□□□ -1.58
ATG4YNL223W KAE1P36132 386 aa5.2□□□□□ -1.58
ATG4YNL223W MGE1P38523 228 aa5.2□□□□□ -1.58
ATG4YNL223W VMA22P38784 181 aa5.2□□□□□ -1.58
ATG4YNL223W SEC24P40482 926 aaKnown RBP5.2□□□□□ -1.58
ATG4YNL223W OTU1P43558 301 aa5.2□□□□□ -1.58
ATG4YNL223W BXI1P48558 297 aa5.2□□□□□ -1.58
ATG4YNL223W NIT3P49954 291 aa5.2□□□□□ -1.58
ATG4YNL223W SOK2P53438 785 aaPredicted RBP5.2□□□□□ -1.58
ATG4YNL223W YNL165WP53891 406 aa5.2□□□□□ -1.58
ATG4YNL223W MRP51Q02950 344 aa5.2□□□□□ -1.58
ATG4YNL223W TY1A-DR2Q03964 440 aaKnown RBP5.2□□□□□ -1.58
ATG4YNL223W COQ11Q05892 277 aa5.2□□□□□ -1.58
ATG4YNL223W TGS1Q12052 315 aa5.2□□□□□ -1.58
ATG4YNL223W ISA2Q12425 185 aa5.2□□□□□ -1.58
ATG4YNL223W ODC2Q99297 307 aa5.2□□□□□ -1.58
ATG4YNL223W FSH3Q99369 266 aa5.2□□□□□ -1.58
ATG4YNL223W COX5BP00425 151 aa5.2□□□□□ -1.58
ATG4YNL223W CDC36P06100 191 aaPredicted RBP5.2□□□□□ -1.58
ATG4YNL223W RPS16AP0CX51 143 aaKnown RBP5.2□□□□□ -1.58
ATG4YNL223W RPS16BP0CX52 143 aaKnown RBP5.2□□□□□ -1.58
ATG4YNL223W NAM2P11325 894 aa5.2□□□□□ -1.58
ATG4YNL223W RPB10P22139 70 aa5.2□□□□□ -1.58
ATG4YNL223W HXT2P23585 541 aa5.2□□□□□ -1.58
ATG4YNL223W RPS26AP39938 119 aaKnown RBP5.2□□□□□ -1.58
ATG4YNL223W RPS26BP39939 119 aaKnown RBP5.2□□□□□ -1.58
ATG4YNL223W YEL057CP39983 233 aa5.2□□□□□ -1.58
ATG4YNL223W AVT7P40501 490 aa5.2□□□□□ -1.58
ATG4YNL223W PHB1P40961 287 aa5.2□□□□□ -1.58
ATG4YNL223W CTK2P46962 323 aa5.2□□□□□ -1.58
ATG4YNL223W HSV2P50079 448 aaPredicted RBP5.2□□□□□ -1.58
ATG4YNL223W PHB2P50085 310 aa5.2□□□□□ -1.58
ATG4YNL223W GPG1P53130 126 aa5.2□□□□□ -1.58
ATG4YNL223W MRPL19P53875 158 aa5.2□□□□□ -1.58
ATG4YNL223W NRK1P53915 240 aa5.2□□□□□ -1.58
ATG4YNL223W RNH201P53942 307 aa5.2□□□□□ -1.58
ATG4YNL223W YLR031WQ07978 186 aa5.2□□□□□ -1.58
ATG4YNL223W YOL024WQ08172 172 aa5.2□□□□□ -1.58
ATG4YNL223W YOR385WQ08909 290 aa5.2□□□□□ -1.58
ATG4YNL223W YPL278CQ08990 100 aa5.2□□□□□ -1.58
ATG4YNL223W TMS1Q12116 473 aa5.2□□□□□ -1.58
ATG4YNL223W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
ATG4YNL223W MCT1Q12283 360 aa5.2□□□□□ -1.58
ATG4YNL223W RDI1Q12434 202 aa5.2□□□□□ -1.58
ATG4YNL223W TDH2P00358 332 aaKnown RBP5.19□□□□□ -1.58
ATG4YNL223W GCD1P09032 578 aaPredicted RBP5.19□□□□□ -1.58
ATG4YNL223W URA6P15700 204 aa5.19□□□□□ -1.58
ATG4YNL223W ADH7P25377 361 aa5.19□□□□□ -1.58
ATG4YNL223W AFG1P32317 509 aa5.19□□□□□ -1.58
ATG4YNL223W ARO4P32449 370 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms