RNA–Protein interactions for RNA: YMR224C

MRE11, Transcript of Nuclease subunit of the MRX complex with Rad50p and Xrs2p, yeast

Gene MRE11, Length 2,079 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRE11	YMR224C	YHR127W	P38833	243 aa	Known RBP	4.25	□□□□□ -1.73
MRE11	YMR224C	MRS2	Q01926	470 aa		4.25	□□□□□ -1.73
MRE11	YMR224C	HEM25	Q07534	307 aa		4.25	□□□□□ -1.73
MRE11	YMR224C	YOR376W	Q08900	122 aa		4.25	□□□□□ -1.73
MRE11	YMR224C	TUS1	Q06412	1307 aa		4.25	□□□□□ -1.73
MRE11	YMR224C	BGL2	P15703	313 aa	Known RBP	4.24	□□□□□ -1.73
MRE11	YMR224C	SNF6	P18888	332 aa		4.24	□□□□□ -1.73
MRE11	YMR224C	YBL059W	P34224	193 aa		4.24	□□□□□ -1.73
MRE11	YMR224C	SEN34	P39707	275 aa		4.24	□□□□□ -1.73
MRE11	YMR224C	YJR149W	P47177	404 aa		4.24	□□□□□ -1.73
MRE11	YMR224C	SNZ2	P53824	298 aa		4.24	□□□□□ -1.73
MRE11	YMR224C	ASP3-2	P0CX77	362 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	ASP3-3	P0CX78	362 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	ASP3-4	P0CX79	362 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	ASP3-1	P0CZ17	362 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	YCR025C	P25352	136 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	BAT1	P38891	393 aa	Known RBP	4.23	□□□□□ -1.73
MRE11	YMR224C	OXA1	P39952	402 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	AVT7	P40501	490 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	SNZ3	P43545	298 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	MCM22	P47167	239 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	YLR152C	P54072	576 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	SPG4	Q04438	115 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	RPL21B	Q12672	160 aa	Known RBP	4.23	□□□□□ -1.73
MRE11	YMR224C	SIR4	P11978	1358 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	YMR316C-A	I2HB70	103 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	YKR104W	P0CE69	306 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	SPT15	P13393	240 aa	Known RBP	4.23	□□□□□ -1.73
MRE11	YMR224C	SNA3	P14359	133 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	DPB2	P24482	689 aa	Predicted RBP	4.23	□□□□□ -1.73
MRE11	YMR224C	CAM1	P29547	415 aa	Known RBP	4.23	□□□□□ -1.73
MRE11	YMR224C	EFM1	P38732	585 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	STB1	P42845	420 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	IRC18	P47056	224 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	YGL039W	P53183	348 aa	Known RBP	4.23	□□□□□ -1.73
MRE11	YMR224C	FYV6	P53913	173 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	YPL278C	Q08990	100 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	YBR298C-A	Q8TGK4	73 aa		4.23	□□□□□ -1.73
MRE11	YMR224C	FBA1	P14540	359 aa	Known RBP	4.22	□□□□□ -1.73
MRE11	YMR224C	CDC50	P25656	391 aa		4.22	□□□□□ -1.73
MRE11	YMR224C	RFS1	P38234	210 aa	Known RBP	4.22	□□□□□ -1.73
MRE11	YMR224C	YHL049C	P38722	271 aa		4.22	□□□□□ -1.73
MRE11	YMR224C	UTP18	P40362	594 aa	Predicted RBP	4.22	□□□□□ -1.73
MRE11	YMR224C	RNH201	P53942	307 aa		4.22	□□□□□ -1.73
MRE11	YMR224C	YPL113C	Q02961	396 aa		4.22	□□□□□ -1.73
MRE11	YMR224C	SEI1	Q06058	285 aa		4.22	□□□□□ -1.73
MRE11	YMR224C	YDL144C	Q07589	356 aa		4.22	□□□□□ -1.73
MRE11	YMR224C	PPH21	P23594	369 aa		4.22	□□□□□ -1.73
MRE11	YMR224C	ARO2	P28777	376 aa	Known RBP	4.22	□□□□□ -1.73
MRE11	YMR224C	MRPL3	P36516	390 aa		4.22	□□□□□ -1.73
MRE11	YMR224C	SOL2	P37262	315 aa		4.22	□□□□□ -1.73
MRE11	YMR224C	YFL064C	P43540	174 aa		4.22	□□□□□ -1.73
MRE11	YMR224C	TPO4	Q12256	659 aa		4.22	□□□□□ -1.73
MRE11	YMR224C	PHO80	P20052	293 aa		4.21	□□□□□ -1.74
MRE11	YMR224C	AAT2	P23542	418 aa	Known RBP	4.21	□□□□□ -1.74
MRE11	YMR224C	RFT1	P38206	574 aa	Predicted RBP	4.21	□□□□□ -1.74
MRE11	YMR224C	TIM17	P39515	158 aa		4.21	□□□□□ -1.74
MRE11	YMR224C	CPR7	P47103	393 aa		4.21	□□□□□ -1.74
MRE11	YMR224C	OST3	P48439	350 aa		4.21	□□□□□ -1.74
MRE11	YMR224C	BRR6	P53062	197 aa		4.21	□□□□□ -1.74
MRE11	YMR224C	FMP41	P53889	259 aa	Known RBP	4.21	□□□□□ -1.74
MRE11	YMR224C	SUR2	P38992	349 aa		4.2	□□□□□ -1.74
MRE11	YMR224C	POG1	P40473	351 aa		4.2	□□□□□ -1.74
MRE11	YMR224C	PRP24	P49960	444 aa	Known RBP	4.2	□□□□□ -1.74
MRE11	YMR224C	YGL159W	P53110	370 aa		4.2	□□□□□ -1.74
MRE11	YMR224C	RMI1	Q02685	241 aa		4.2	□□□□□ -1.74
MRE11	YMR224C	DXO1	Q06349	442 aa		4.2	□□□□□ -1.74
MRE11	YMR224C	YPR147C	Q06522	304 aa	Known RBP	4.2	□□□□□ -1.74
MRE11	YMR224C	NDD1	Q08887	554 aa		4.2	□□□□□ -1.74
MRE11	YMR224C	URA6	P15700	204 aa		4.2	□□□□□ -1.74
MRE11	YMR224C	DRE2	P36152	348 aa		4.2	□□□□□ -1.74
MRE11	YMR224C	YCR087C-A	P37263	153 aa		4.2	□□□□□ -1.74
MRE11	YMR224C	SHE3	P38272	425 aa	Known RBP	4.2	□□□□□ -1.74
MRE11	YMR224C	YIP3	P53633	176 aa		4.2	□□□□□ -1.74
MRE11	YMR224C	YAK1	P14680	807 aa		4.19	□□□□□ -1.74
MRE11	YMR224C	IMP1	P28627	190 aa		4.19	□□□□□ -1.74
MRE11	YMR224C	VPH2	P32341	215 aa		4.19	□□□□□ -1.74
MRE11	YMR224C	MIG3	P39943	394 aa		4.19	□□□□□ -1.74
MRE11	YMR224C	YJR141W	P47172	347 aa	Predicted RBP	4.19	□□□□□ -1.74
MRE11	YMR224C	TOS8	P53147	276 aa		4.19	□□□□□ -1.74
MRE11	YMR224C	FMP48	P53233	369 aa		4.19	□□□□□ -1.74
MRE11	YMR224C	MRX11	Q03079	207 aa		4.19	□□□□□ -1.74
MRE11	YMR224C	YDR018C	Q12185	396 aa		4.19	□□□□□ -1.74
MRE11	YMR224C	POP8	P38208	133 aa		4.18	□□□□□ -1.74
MRE11	YMR224C	OM14	P38325	134 aa		4.18	□□□□□ -1.74
MRE11	YMR224C	PRM15	Q03262	622 aa		4.18	□□□□□ -1.74
MRE11	YMR224C	RRP40	Q08285	240 aa	Known RBP	4.18	□□□□□ -1.74
MRE11	YMR224C	CAT2	P32796	670 aa	Known RBP	4.18	□□□□□ -1.74
MRE11	YMR224C	SRY1	P36007	326 aa		4.18	□□□□□ -1.74
MRE11	YMR224C	MRPL39	P36533	70 aa		4.18	□□□□□ -1.74
MRE11	YMR224C	YMR144W	P40214	342 aa	Known RBP	4.18	□□□□□ -1.74
MRE11	YMR224C	YDR115W	Q04598	105 aa		4.18	□□□□□ -1.74
MRE11	YMR224C	YMR317W	Q04893	1140 aa		4.18	□□□□□ -1.74
MRE11	YMR224C	MRX4	Q12467	430 aa		4.18	□□□□□ -1.74
MRE11	YMR224C	TIP20	P33891	701 aa		4.17	□□□□□ -1.74
MRE11	YMR224C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
MRE11	YMR224C	SLX9	P53251	210 aa	Predicted RBP	4.17	□□□□□ -1.74
MRE11	YMR224C	SYF2	P53277	215 aa	Predicted RBP	4.17	□□□□□ -1.74
MRE11	YMR224C	PDR17	P53844	350 aa		4.17	□□□□□ -1.74
MRE11	YMR224C	GGC1	P38988	300 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms