RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W CTS2Q06350 511 aa2.03□□□□□ -2.08
SMD2YLR275W SUE1Q06524 206 aa2.03□□□□□ -2.08
SMD2YLR275W ISD11Q6Q560 94 aa2.03□□□□□ -2.08
SMD2YLR275W COX2P00410 251 aa2.02□□□□□ -2.09
SMD2YLR275W MRP1P10662 321 aaKnown RBP2.02□□□□□ -2.09
SMD2YLR275W DPM1P14020 267 aaKnown RBP2.02□□□□□ -2.09
SMD2YLR275W HMT1P38074 348 aa2.02□□□□□ -2.09
SMD2YLR275W ARN2P38724 620 aa2.02□□□□□ -2.09
SMD2YLR275W YJR012CP47087 207 aa2.02□□□□□ -2.09
SMD2YLR275W NBP1P52919 319 aaPredicted RBP2.02□□□□□ -2.09
SMD2YLR275W SWS2P53937 143 aa2.02□□□□□ -2.09
SMD2YLR275W ALG11P53954 548 aaKnown RBP2.02□□□□□ -2.09
SMD2YLR275W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
SMD2YLR275W YPL039WQ03080 316 aa2.02□□□□□ -2.09
SMD2YLR275W YMR166CQ03829 368 aa2.02□□□□□ -2.09
SMD2YLR275W GRH1Q04410 372 aaKnown RBP2.02□□□□□ -2.09
SMD2YLR275W BTS1Q12051 335 aa2.02□□□□□ -2.09
SMD2YLR275W SME1Q12330 94 aaPredicted RBP2.02□□□□□ -2.09
SMD2YLR275W AI5_BETAQ9ZZX0 354 aa2.02□□□□□ -2.09
SMD2YLR275W STH1P32597 1359 aa2.01□□□□□ -2.09
SMD2YLR275W POL30P15873 258 aaKnown RBP2.01□□□□□ -2.09
SMD2YLR275W DAL82P21705 255 aa2.01□□□□□ -2.09
SMD2YLR275W YUH1P35127 236 aa2.01□□□□□ -2.09
SMD2YLR275W CSG2P35206 410 aa2.01□□□□□ -2.09
SMD2YLR275W HEK2P38199 381 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
SMD2YLR275W PRM9P39551 298 aa2.01□□□□□ -2.09
SMD2YLR275W NBP35P52920 328 aa2.01□□□□□ -2.09
SMD2YLR275W MAL13P53338 473 aa2.01□□□□□ -2.09
SMD2YLR275W ADH6Q04894 360 aaKnown RBP2.01□□□□□ -2.09
SMD2YLR275W SPO77Q06134 477 aa2.01□□□□□ -2.09
SMD2YLR275W YOL019WQ08157 551 aa2.01□□□□□ -2.09
SMD2YLR275W INO80P53115 1489 aa2.01□□□□□ -2.09
SMD2YLR275W BEM2P39960 2167 aaKnown RBP2□□□□□ -2.09
SMD2YLR275W BMH1P29311 267 aaKnown RBP2□□□□□ -2.09
SMD2YLR275W YHL049CP38722 271 aa2□□□□□ -2.09
SMD2YLR275W RPL10P41805 221 aaKnown RBP2□□□□□ -2.09
SMD2YLR275W YAR1P46683 200 aa2□□□□□ -2.09
SMD2YLR275W SLX9P53251 210 aaPredicted RBP2□□□□□ -2.09
SMD2YLR275W PEX10Q05568 337 aa2□□□□□ -2.09
SMD2YLR275W YOR268CQ08734 132 aa2□□□□□ -2.09
SMD2YLR275W YOL107WQ12239 342 aa2□□□□□ -2.09
SMD2YLR275W YBL112CQ3E7Y4 105 aa2□□□□□ -2.09
SMD2YLR275W RSR1P13856 272 aa1.99□□□□□ -2.09
SMD2YLR275W SCO1P23833 295 aa1.99□□□□□ -2.09
SMD2YLR275W DAN1P47178 298 aa1.99□□□□□ -2.09
SMD2YLR275W NIF3P53081 288 aa1.99□□□□□ -2.09
SMD2YLR275W EBS1Q03466 884 aaKnown RBP1.99□□□□□ -2.09
SMD2YLR275W RRT8Q08219 342 aa1.99□□□□□ -2.09
SMD2YLR275W COS2P0CX12 379 aa1.98□□□□□ -2.09
SMD2YLR275W COS3P0CX13 379 aa1.98□□□□□ -2.09
SMD2YLR275W TOM40P23644 387 aaKnown RBP1.98□□□□□ -2.09
SMD2YLR275W NRG2P38082 220 aa1.98□□□□□ -2.09
SMD2YLR275W PRS2P38620 318 aaKnown RBP1.98□□□□□ -2.09
SMD2YLR275W YHR045WP38775 560 aa1.98□□□□□ -2.09
SMD2YLR275W YDR209CQ03480 137 aa1.98□□□□□ -2.09
SMD2YLR275W YPL119C-AQ3E751 87 aa1.98□□□□□ -2.09
SMD2YLR275W RAD3P06839 778 aa1.97□□□□□ -2.09
SMD2YLR275W MSF1P08425 469 aa1.97□□□□□ -2.09
SMD2YLR275W VPS3P23643 1011 aa1.97□□□□□ -2.09
SMD2YLR275W QRI5P32344 111 aa1.97□□□□□ -2.09
SMD2YLR275W DSN1P40568 576 aa1.97□□□□□ -2.09
SMD2YLR275W AGX1P43567 385 aa1.97□□□□□ -2.09
SMD2YLR275W YJL028WP47062 111 aa1.97□□□□□ -2.09
SMD2YLR275W BAT2P47176 376 aaKnown RBP1.97□□□□□ -2.09
SMD2YLR275W AAH1P53909 347 aa1.97□□□□□ -2.09
SMD2YLR275W SLM2P53955 656 aa1.97□□□□□ -2.09
SMD2YLR275W RAD10P06838 210 aa1.96□□□□□ -2.1
SMD2YLR275W POX1P13711 748 aa1.96□□□□□ -2.1
SMD2YLR275W DPB2P24482 689 aaPredicted RBP1.96□□□□□ -2.1
SMD2YLR275W CWP1P28319 239 aa1.96□□□□□ -2.1
SMD2YLR275W RPT5P33297 434 aaKnown RBP1.96□□□□□ -2.1
SMD2YLR275W SFC1P33303 322 aa1.96□□□□□ -2.1
SMD2YLR275W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
SMD2YLR275W PRS4P38063 326 aaPredicted RBP1.96□□□□□ -2.1
SMD2YLR275W BIG1P38813 335 aa1.96□□□□□ -2.1
SMD2YLR275W SPT8P38915 602 aa1.96□□□□□ -2.1
SMD2YLR275W TEM1P38987 245 aa1.96□□□□□ -2.1
SMD2YLR275W COG3P40094 801 aa1.96□□□□□ -2.1
SMD2YLR275W SDO1Q07953 250 aaKnown RBP1.96□□□□□ -2.1
SMD2YLR275W SLD7Q08457 257 aa1.96□□□□□ -2.1
SMD2YLR275W SMT3Q12306 101 aaKnown RBP1.96□□□□□ -2.1
SMD2YLR275W PST1Q12355 444 aa1.96□□□□□ -2.1
SMD2YLR275W NOT5Q12514 560 aaPredicted RBP1.96□□□□□ -2.1
SMD2YLR275W MAL32P38158 584 aa1.95□□□□□ -2.1
SMD2YLR275W BNA6P43619 295 aa1.95□□□□□ -2.1
SMD2YLR275W MAL12P53341 584 aa1.95□□□□□ -2.1
SMD2YLR275W COS6P53344 381 aa1.95□□□□□ -2.1
SMD2YLR275W ASI3P53983 676 aa1.95□□□□□ -2.1
SMD2YLR275W BOP2Q06150 570 aa1.95□□□□□ -2.1
SMD2YLR275W ATG17Q06410 417 aa1.95□□□□□ -2.1
SMD2YLR275W SNF8Q12483 233 aa1.95□□□□□ -2.1
SMD2YLR275W RNA15P25299 296 aaPredicted RBP1.94□□□□□ -2.1
SMD2YLR275W RNP1P32385 249 aa1.94□□□□□ -2.1
SMD2YLR275W JEN1P36035 616 aa1.94□□□□□ -2.1
SMD2YLR275W MRX3P38172 270 aa1.94□□□□□ -2.1
SMD2YLR275W SMB1P40018 196 aaKnown RBP1.94□□□□□ -2.1
SMD2YLR275W YJL016WP47072 561 aa1.94□□□□□ -2.1
SMD2YLR275W CAB4P53332 305 aa1.94□□□□□ -2.1
SMD2YLR275W YNL134CP53912 376 aaKnown RBP1.94□□□□□ -2.1
SMD2YLR275W RRN5Q02983 363 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms