RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W BSC5P53755 489 aa4.02□□□□□ -1.77
CBF5YLR175W CIK1Q01649 594 aa4.02□□□□□ -1.77
CBF5YLR175W MSS11Q03825 758 aa4.02□□□□□ -1.77
CBF5YLR175W YMR252CQ04814 134 aa4.02□□□□□ -1.77
CBF5YLR175W CTS2Q06350 511 aa4.02□□□□□ -1.77
CBF5YLR175W MRPL35Q06678 367 aa4.02□□□□□ -1.77
CBF5YLR175W SYC1Q08553 188 aaPredicted RBP4.02□□□□□ -1.77
CBF5YLR175W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
CBF5YLR175W RCN2Q12044 265 aa4.02□□□□□ -1.77
CBF5YLR175W TGS1Q12052 315 aa4.02□□□□□ -1.77
CBF5YLR175W RTN2Q12443 393 aa4.02□□□□□ -1.77
CBF5YLR175W RRI1Q12468 440 aa4.02□□□□□ -1.77
CBF5YLR175W YLR099W-AQ3E798 87 aa4.02□□□□□ -1.77
CBF5YLR175W MEC1P38111 2368 aa4.01□□□□□ -1.77
CBF5YLR175W SEC16P48415 2195 aaKnown RBP4.01□□□□□ -1.77
CBF5YLR175W CYC1P00044 109 aaPredicted RBP4.01□□□□□ -1.77
CBF5YLR175W DBF2P22204 572 aa4.01□□□□□ -1.77
CBF5YLR175W CPR2P23285 205 aa4.01□□□□□ -1.77
CBF5YLR175W MEK1P24719 497 aaPredicted RBP4.01□□□□□ -1.77
CBF5YLR175W ERG9P29704 444 aa4.01□□□□□ -1.77
CBF5YLR175W SOF1P33750 489 aaKnown RBP4.01□□□□□ -1.77
CBF5YLR175W TMA19P35691 167 aaKnown RBP4.01□□□□□ -1.77
CBF5YLR175W CHS7P38843 316 aa4.01□□□□□ -1.77
CBF5YLR175W SLZ1P40167 298 aa4.01□□□□□ -1.77
CBF5YLR175W YIL169CP40442 995 aa4.01□□□□□ -1.77
CBF5YLR175W AIM20P40451 204 aa4.01□□□□□ -1.77
CBF5YLR175W SER2P42941 309 aa4.01□□□□□ -1.77
CBF5YLR175W GZF3P42944 551 aaKnown RBP4.01□□□□□ -1.77
CBF5YLR175W ATG18P43601 500 aa4.01□□□□□ -1.77
CBF5YLR175W IMD3P50095 523 aaKnown RBP4.01□□□□□ -1.77
CBF5YLR175W KAP120Q02932 1032 aa4.01□□□□□ -1.77
CBF5YLR175W NNT1Q05874 261 aa4.01□□□□□ -1.77
CBF5YLR175W GAS2Q06135 555 aa4.01□□□□□ -1.77
CBF5YLR175W GCN4P03069 281 aa4□□□□□ -1.77
CBF5YLR175W CDC36P06100 191 aaPredicted RBP4□□□□□ -1.77
CBF5YLR175W HIS3P06633 220 aa4□□□□□ -1.77
CBF5YLR175W PHO2P07269 559 aa4□□□□□ -1.77
CBF5YLR175W MATALPHA1P0CY06 175 aa4□□□□□ -1.77
CBF5YLR175W HMLALPHA1P0CY07 175 aa4□□□□□ -1.77
CBF5YLR175W STE18P18852 110 aa4□□□□□ -1.77
CBF5YLR175W SPT14P32363 452 aa4□□□□□ -1.77
CBF5YLR175W SPT10P35208 640 aa4□□□□□ -1.77
CBF5YLR175W YBR137WP38276 179 aa4□□□□□ -1.77
CBF5YLR175W YMR262WP38430 313 aa4□□□□□ -1.77
CBF5YLR175W YHK8P38776 514 aa4□□□□□ -1.77
CBF5YLR175W IPI1P38803 334 aaPredicted RBP4□□□□□ -1.77
CBF5YLR175W PTI1P39927 425 aaPredicted RBP4□□□□□ -1.77
CBF5YLR175W PUG1P40100 303 aa4□□□□□ -1.77
CBF5YLR175W YJL055WP47044 245 aa4□□□□□ -1.77
CBF5YLR175W BNA2P47125 453 aa4□□□□□ -1.77
CBF5YLR175W CWC23P52868 283 aaPredicted RBP4□□□□□ -1.77
CBF5YLR175W MRH4P53166 561 aa4□□□□□ -1.77
CBF5YLR175W SLI1P53304 468 aa4□□□□□ -1.77
CBF5YLR175W PET191Q02772 108 aa4□□□□□ -1.77
CBF5YLR175W YDR102CQ03864 110 aa4□□□□□ -1.77
CBF5YLR175W YMR130WQ04223 302 aa4□□□□□ -1.77
CBF5YLR175W RBS1Q05672 457 aaKnown RBP4□□□□□ -1.77
CBF5YLR175W CRR1Q05790 422 aa4□□□□□ -1.77
CBF5YLR175W RGC1Q06108 1083 aaKnown RBP4□□□□□ -1.77
CBF5YLR175W YDL218WQ07629 317 aa4□□□□□ -1.77
CBF5YLR175W BRE4Q07660 1125 aa4□□□□□ -1.77
CBF5YLR175W FRE3Q08905 711 aa4□□□□□ -1.77
CBF5YLR175W YRM1Q12340 786 aa4□□□□□ -1.77
CBF5YLR175W NOP56Q12460 504 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
CBF5YLR175W SOD2P00447 233 aa3.99□□□□□ -1.77
CBF5YLR175W PRB1P09232 635 aa3.99□□□□□ -1.77
CBF5YLR175W NAM2P11325 894 aa3.99□□□□□ -1.77
CBF5YLR175W KRR1P25586 316 aaPredicted RBP3.99□□□□□ -1.77
CBF5YLR175W PTC6P25646 442 aa3.99□□□□□ -1.77
CBF5YLR175W ITR1P30605 584 aa3.99□□□□□ -1.77
CBF5YLR175W HOM6P31116 359 aaKnown RBP3.99□□□□□ -1.77
CBF5YLR175W ERG24P32462 438 aaKnown RBP3.99□□□□□ -1.77
CBF5YLR175W RPC34P32910 317 aa3.99□□□□□ -1.77
CBF5YLR175W FRM2P37261 193 aa3.99□□□□□ -1.77
CBF5YLR175W SMB1P40018 196 aaKnown RBP3.99□□□□□ -1.77
CBF5YLR175W PAM16P42949 149 aa3.99□□□□□ -1.77
CBF5YLR175W DPB11P47027 764 aaPredicted RBP3.99□□□□□ -1.77
CBF5YLR175W IRC18P47056 224 aa3.99□□□□□ -1.77
CBF5YLR175W LYS20P48570 428 aaKnown RBP3.99□□□□□ -1.77
CBF5YLR175W YGL260WP53056 76 aa3.99□□□□□ -1.77
CBF5YLR175W DOC1P53068 250 aa3.99□□□□□ -1.77
CBF5YLR175W ARO8P53090 500 aaKnown RBP3.99□□□□□ -1.77
CBF5YLR175W TPN1P53099 579 aa3.99□□□□□ -1.77
CBF5YLR175W SAM50P53969 484 aa3.99□□□□□ -1.77
CBF5YLR175W YLR152CP54072 576 aa3.99□□□□□ -1.77
CBF5YLR175W YDR387CQ04162 555 aa3.99□□□□□ -1.77
CBF5YLR175W COQ11Q05892 277 aa3.99□□□□□ -1.77
CBF5YLR175W PEX30Q06169 523 aa3.99□□□□□ -1.77
CBF5YLR175W TPO3Q06451 622 aa3.99□□□□□ -1.77
CBF5YLR175W PEX27Q08580 376 aa3.99□□□□□ -1.77
CBF5YLR175W ATG41Q12048 136 aa3.99□□□□□ -1.77
CBF5YLR175W RTC5Q12108 567 aaKnown RBP3.99□□□□□ -1.77
CBF5YLR175W LYS21Q12122 440 aaKnown RBP3.99□□□□□ -1.77
CBF5YLR175W YDL180WQ12301 547 aa3.99□□□□□ -1.77
CBF5YLR175W YLR358CO13565 187 aa3.98□□□□□ -1.77
CBF5YLR175W IPP1P00817 287 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W RPP2AP05319 106 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W RPS16AP0CX51 143 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W RPS16BP0CX52 143 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W CAP2P13517 287 aa3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms