RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeast

Gene SDO1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDO1	YLR022C	YNL140C	P53910	189 aa		2.61	□□□□□ -1.99
SDO1	YLR022C	CDC123	Q05791	360 aa		2.61	□□□□□ -1.99
SDO1	YLR022C	FCY22	Q12119	530 aa		2.61	□□□□□ -1.99
SDO1	YLR022C	RNH203	Q12338	110 aa		2.61	□□□□□ -1.99
SDO1	YLR022C	MRPL23	Q12487	163 aa	Predicted RBP	2.61	□□□□□ -1.99
SDO1	YLR022C	TDH1	P00360	332 aa	Known RBP	2.6	□□□□□ -1.99
SDO1	YLR022C	RPB5	P20434	215 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	PBN1	P25580	416 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	YBL059W	P34224	193 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	CLG1	P35190	452 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	BMT2	P38278	337 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	RFC3	P38629	340 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	LCP5	P40079	357 aa	Predicted RBP	2.6	□□□□□ -1.99
SDO1	YLR022C	YMR134W	P40207	237 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	SNL1	P40548	159 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	GCN20	P43535	752 aa	Known RBP	2.6	□□□□□ -1.99
SDO1	YLR022C	LOH1	P47055	219 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	GTO1	P48239	356 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	TAF6	P53040	516 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	PNC1	P53184	216 aa	Known RBP	2.6	□□□□□ -1.99
SDO1	YLR022C	CAF40	P53829	373 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	NCE101	Q02820	53 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	SPO19	Q03029	223 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	RCE1	Q03530	315 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	SNX41	Q04053	625 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	ARV1	Q06541	321 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	RRT8	Q08219	342 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	PEX27	Q08580	376 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	RDL2	Q08742	149 aa	Known RBP	2.6	□□□□□ -1.99
SDO1	YLR022C	FDH1	Q08911	376 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	ATG34	Q12292	412 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	MED4	Q12343	284 aa		2.6	□□□□□ -1.99
SDO1	YLR022C	DCP1	Q12517	231 aa	Predicted RBP	2.6	□□□□□ -1.99
SDO1	YLR022C	RPL24A	P04449	155 aa	Known RBP	2.59	□□□□□ -1.99
SDO1	YLR022C	NFT1	P0CE68	1218 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	HEM15	P16622	393 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	ARO2	P28777	376 aa	Known RBP	2.59	□□□□□ -1.99
SDO1	YLR022C	EHD3	P28817	500 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
SDO1	YLR022C	SOR1	P35497	357 aa	Known RBP	2.59	□□□□□ -1.99
SDO1	YLR022C	YKL070W	P36087	169 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	SPP381	P38282	291 aa	Predicted RBP	2.59	□□□□□ -1.99
SDO1	YLR022C	TCD1	P38756	429 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	NSG1	P38837	291 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	RBG1	P39729	369 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	HYR1	P40581	163 aa	Known RBP	2.59	□□□□□ -1.99
SDO1	YLR022C	MIC19	P43594	170 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	GCD14	P46959	383 aa	Predicted RBP	2.59	□□□□□ -1.99
SDO1	YLR022C	RPS12	P48589	143 aa	Known RBP	2.59	□□□□□ -1.99
SDO1	YLR022C	CGR1	P53188	120 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	CDH1	P53197	566 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	CAB5	Q03941	241 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	PBA1	Q05778	276 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	RRG8	Q06109	277 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	YPR147C	Q06522	304 aa	Known RBP	2.59	□□□□□ -1.99
SDO1	YLR022C	SOR2	Q07786	357 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	MUM3	Q08750	479 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	MHT1	Q12525	324 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	MHF1	Q3E835	90 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	YCL012C	Q8J0M4	134 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	FSH3	Q99369	266 aa		2.59	□□□□□ -1.99
SDO1	YLR022C	MES1	P00958	751 aa	Known RBP	2.58	□□□□□ -2
SDO1	YLR022C	HHF1	P02309	103 aa	Known RBP	2.58	□□□□□ -2
SDO1	YLR022C	RAD57	P25301	460 aa		2.58	□□□□□ -2
SDO1	YLR022C	DEG1	P31115	442 aa	Known RBP	2.58	□□□□□ -2
SDO1	YLR022C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
SDO1	YLR022C	HXT1	P32465	570 aa		2.58	□□□□□ -2
SDO1	YLR022C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
SDO1	YLR022C	QDR3	P38227	689 aa		2.58	□□□□□ -2
SDO1	YLR022C	YHR177W	P38867	453 aa		2.58	□□□□□ -2
SDO1	YLR022C	ALP1	P38971	573 aa		2.58	□□□□□ -2
SDO1	YLR022C	AIM20	P40451	204 aa		2.58	□□□□□ -2
SDO1	YLR022C	SAS2	P40963	338 aa		2.58	□□□□□ -2
SDO1	YLR022C	GLR1	P41921	483 aa	Known RBP	2.58	□□□□□ -2
SDO1	YLR022C	UBC13	P52490	153 aa		2.58	□□□□□ -2
SDO1	YLR022C	LSG1	P53145	640 aa	Known RBP	2.58	□□□□□ -2
SDO1	YLR022C	MTM1	P53320	366 aa		2.58	□□□□□ -2
SDO1	YLR022C	YIF1	P53845	314 aa	Known RBP	2.58	□□□□□ -2
SDO1	YLR022C	APJ1	P53940	528 aa		2.58	□□□□□ -2
SDO1	YLR022C	SWP1	Q02795	286 aa		2.58	□□□□□ -2
SDO1	YLR022C	MRP51	Q02950	344 aa		2.58	□□□□□ -2
SDO1	YLR022C	MMT1	Q03218	510 aa		2.58	□□□□□ -2
SDO1	YLR022C	YDR387C	Q04162	555 aa		2.58	□□□□□ -2
SDO1	YLR022C	GMC1	Q04399	608 aa		2.58	□□□□□ -2
SDO1	YLR022C	COX20	Q04935	205 aa		2.58	□□□□□ -2
SDO1	YLR022C	BCP1	Q06338	283 aa		2.58	□□□□□ -2
SDO1	YLR022C	TAZ1	Q06510	381 aa		2.58	□□□□□ -2
SDO1	YLR022C	VAC14	Q06708	880 aa		2.58	□□□□□ -2
SDO1	YLR022C	SGT1	Q08446	395 aa		2.58	□□□□□ -2
SDO1	YLR022C	GET4	Q12125	312 aa		2.58	□□□□□ -2
SDO1	YLR022C	YCL048W-A	Q2V2Q2	79 aa		2.58	□□□□□ -2
SDO1	YLR022C	RGS2	Q99188	309 aa		2.58	□□□□□ -2
SDO1	YLR022C	DST1	P07273	309 aa		2.57	□□□□□ -2
SDO1	YLR022C	YLL053C	P0CD98	152 aa		2.57	□□□□□ -2
SDO1	YLR022C	RPS23A	P0CX29	145 aa	Known RBP	2.57	□□□□□ -2
SDO1	YLR022C	RPS23B	P0CX30	145 aa		2.57	□□□□□ -2
SDO1	YLR022C	NAM2	P11325	894 aa		2.57	□□□□□ -2
SDO1	YLR022C	PET123	P17558	318 aa		2.57	□□□□□ -2
SDO1	YLR022C	HXT2	P23585	541 aa		2.57	□□□□□ -2
SDO1	YLR022C	MGT1	P26188	188 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms