RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W SWS2P53937 143 aa4.5□□□□□ -1.69
PRP40YKL012W LOA1Q06508 300 aa4.5□□□□□ -1.69
PRP40YKL012W ADF1Q2V2Q1 113 aa4.5□□□□□ -1.69
PRP40YKL012W VPS3P23643 1011 aa4.5□□□□□ -1.69
PRP40YKL012W QRI5P32344 111 aa4.5□□□□□ -1.69
PRP40YKL012W MRPL27P36526 146 aaPredicted RBP4.5□□□□□ -1.69
PRP40YKL012W YER184CP39961 794 aa4.5□□□□□ -1.69
PRP40YKL012W RRG9P40156 214 aa4.5□□□□□ -1.69
PRP40YKL012W COG7P53195 279 aa4.5□□□□□ -1.69
PRP40YKL012W EBS1Q03466 884 aaKnown RBP4.5□□□□□ -1.69
PRP40YKL012W INP1Q03694 420 aa4.5□□□□□ -1.69
PRP40YKL012W TRM10Q12400 293 aa4.5□□□□□ -1.69
PRP40YKL012W SNF8Q12483 233 aa4.5□□□□□ -1.69
PRP40YKL012W TPS2P31688 896 aaKnown RBP4.49□□□□□ -1.69
PRP40YKL012W VPH2P32341 215 aa4.49□□□□□ -1.69
PRP40YKL012W ALK2P32789 676 aaPredicted RBP4.49□□□□□ -1.69
PRP40YKL012W VEL1P53058 206 aa4.49□□□□□ -1.69
PRP40YKL012W MRPS16Q02608 121 aa4.49□□□□□ -1.69
PRP40YKL012W MHR1Q06630 226 aa4.49□□□□□ -1.69
PRP40YKL012W YPL278CQ08990 100 aa4.49□□□□□ -1.69
PRP40YKL012W BNI1P41832 1953 aa4.48□□□□□ -1.69
PRP40YKL012W MLP1Q02455 1875 aaKnown RBP4.48□□□□□ -1.69
PRP40YKL012W RPO26P20435 155 aa4.48□□□□□ -1.69
PRP40YKL012W EPT1P22140 391 aa4.48□□□□□ -1.69
PRP40YKL012W ATG15P25641 520 aa4.48□□□□□ -1.69
PRP40YKL012W MRPL3P36516 390 aa4.48□□□□□ -1.69
PRP40YKL012W YFL064CP43540 174 aa4.48□□□□□ -1.69
PRP40YKL012W HOC1P47124 396 aa4.48□□□□□ -1.69
PRP40YKL012W YMR244WQ04018 355 aa4.48□□□□□ -1.69
PRP40YKL012W GIS3Q12418 502 aa4.48□□□□□ -1.69
PRP40YKL012W RAX2Q12465 1220 aa4.48□□□□□ -1.69
PRP40YKL012W DRS2P39524 1355 aa4.48□□□□□ -1.69
PRP40YKL012W YCR025CP25352 136 aa4.48□□□□□ -1.69
PRP40YKL012W SPO77Q06134 477 aa4.48□□□□□ -1.69
PRP40YKL012W YOL029CQ08187 201 aa4.48□□□□□ -1.69
PRP40YKL012W TMC1Q08422 150 aaPredicted RBP4.48□□□□□ -1.69
PRP40YKL012W TCP1P12612 559 aaKnown RBP4.47□□□□□ -1.69
PRP40YKL012W HOM6P31116 359 aaKnown RBP4.47□□□□□ -1.69
PRP40YKL012W MRP21P38175 177 aa4.47□□□□□ -1.69
PRP40YKL012W KRE29P40026 464 aa4.47□□□□□ -1.69
PRP40YKL012W PRE5P40302 234 aaKnown RBP4.47□□□□□ -1.69
PRP40YKL012W YGL262WP53054 175 aa4.47□□□□□ -1.69
PRP40YKL012W LIF1P53150 421 aa4.47□□□□□ -1.69
PRP40YKL012W YPL113CQ02961 396 aa4.47□□□□□ -1.69
PRP40YKL012W GTO3Q04806 366 aa4.47□□□□□ -1.69
PRP40YKL012W PPA2P28239 310 aa4.46□□□□□ -1.7
PRP40YKL012W SEN34P39707 275 aa4.46□□□□□ -1.7
PRP40YKL012W RRT13P40042 185 aa4.46□□□□□ -1.7
PRP40YKL012W AVT7P40501 490 aa4.46□□□□□ -1.7
PRP40YKL012W HSH155P49955 971 aaKnown RBP4.46□□□□□ -1.7
PRP40YKL012W YNL095CP53932 642 aa4.46□□□□□ -1.7
PRP40YKL012W YLR152CP54072 576 aa4.46□□□□□ -1.7
PRP40YKL012W SDC1Q03323 175 aa4.46□□□□□ -1.7
PRP40YKL012W TRM3Q07527 1436 aa4.45□□□□□ -1.7
PRP40YKL012W RHO1P06780 209 aaKnown RBP4.45□□□□□ -1.7
PRP40YKL012W RPL24BP24000 155 aaKnown RBP4.45□□□□□ -1.7
PRP40YKL012W IMP1P28627 190 aa4.45□□□□□ -1.7
PRP40YKL012W MIC19P43594 170 aa4.45□□□□□ -1.7
PRP40YKL012W YAL067W-AQ8TGK6 75 aa4.45□□□□□ -1.7
PRP40YKL012W RPL4AP10664 362 aaKnown RBP4.45□□□□□ -1.7
PRP40YKL012W ZRT3P34240 503 aa4.45□□□□□ -1.7
PRP40YKL012W THO1P40040 218 aaKnown RBP4.45□□□□□ -1.7
PRP40YKL012W RPC17P47076 161 aa4.45□□□□□ -1.7
PRP40YKL012W JHD2P47156 728 aaPredicted RBP4.45□□□□□ -1.7
PRP40YKL012W RPL4BP49626 362 aaKnown RBP4.45□□□□□ -1.7
PRP40YKL012W PRP24P49960 444 aaKnown RBP4.45□□□□□ -1.7
PRP40YKL012W USE1P53146 245 aa4.45□□□□□ -1.7
PRP40YKL012W ASI3P53983 676 aa4.45□□□□□ -1.7
PRP40YKL012W UTP15Q04305 513 aaKnown RBP4.45□□□□□ -1.7
PRP40YKL012W SCW10Q04951 389 aa4.45□□□□□ -1.7
PRP40YKL012W YPL119C-AQ3E751 87 aa4.45□□□□□ -1.7
PRP40YKL012W YOL085CQ99345 113 aa4.45□□□□□ -1.7
PRP40YKL012W AI5_BETAQ9ZZX0 354 aa4.45□□□□□ -1.7
PRP40YKL012W PBN1P25580 416 aa4.44□□□□□ -1.7
PRP40YKL012W JEN1P36035 616 aa4.44□□□□□ -1.7
PRP40YKL012W ECM34P38728 170 aa4.44□□□□□ -1.7
PRP40YKL012W CGR1P53188 120 aa4.44□□□□□ -1.7
PRP40YKL012W TSA2Q04120 196 aa4.44□□□□□ -1.7
PRP40YKL012W ARC18Q05933 178 aaKnown RBP4.44□□□□□ -1.7
PRP40YKL012W YMR316C-AI2HB70 103 aa4.43□□□□□ -1.7
PRP40YKL012W CBP6P07253 162 aaPredicted RBP4.43□□□□□ -1.7
PRP40YKL012W HSP26P15992 214 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
PRP40YKL012W PCL1P24867 279 aa4.43□□□□□ -1.7
PRP40YKL012W CAM1P29547 415 aaKnown RBP4.43□□□□□ -1.7
PRP40YKL012W MED8P38304 223 aa4.43□□□□□ -1.7
PRP40YKL012W YJR079WP47126 109 aa4.43□□□□□ -1.7
PRP40YKL012W HAL1Q01766 294 aa4.43□□□□□ -1.7
PRP40YKL012W ECM19Q06011 112 aa4.43□□□□□ -1.7
PRP40YKL012W YCT1Q12235 531 aa4.43□□□□□ -1.7
PRP40YKL012W DFM1Q12743 341 aaKnown RBP4.43□□□□□ -1.7
PRP40YKL012W YAL063C-AQ3E791 96 aa4.43□□□□□ -1.7
PRP40YKL012W NHP6BP11633 99 aaKnown RBP4.42□□□□□ -1.7
PRP40YKL012W VMA6P32366 345 aaKnown RBP4.42□□□□□ -1.7
PRP40YKL012W YIL012WP40551 113 aa4.42□□□□□ -1.7
PRP40YKL012W THP2O13539 261 aaKnown RBP4.42□□□□□ -1.7
PRP40YKL012W JIP3O13555 125 aa4.42□□□□□ -1.7
PRP40YKL012W TPI1P00942 248 aaKnown RBP4.42□□□□□ -1.7
PRP40YKL012W CDC36P06100 191 aaPredicted RBP4.42□□□□□ -1.7
PRP40YKL012W MRPL25P23369 157 aa4.42□□□□□ -1.7
PRP40YKL012W EHD3P28817 500 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms