RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	CDC36	P06100	191 aa	Predicted RBP	3.87	□□□□□ -1.79
SKI8	YGL213C	PBN1	P25580	416 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	SGE1	P33335	543 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	MIC12	P38341	106 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	YHL049C	P38722	271 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	SEO1	P39709	593 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	BDH1	P39714	382 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	RPE1	P46969	238 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	ZRG17	P53735	605 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	SWT21	P53873	357 aa	Predicted RBP	3.87	□□□□□ -1.79
SKI8	YGL213C	ACT1	P60010	375 aa	Known RBP	3.87	□□□□□ -1.79
SKI8	YGL213C	RHO3	Q00245	231 aa	Known RBP	3.87	□□□□□ -1.79
SKI8	YGL213C	BNA7	Q04066	261 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	MRX8	Q05473	314 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	DCR2	Q05924	578 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	PLB3	Q08108	686 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	YDL211C	Q12121	372 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	RFM1	Q12192	310 aa		3.87	□□□□□ -1.79
SKI8	YGL213C	CKA2	P19454	339 aa		3.86	□□□□□ -1.79
SKI8	YGL213C	RPO26	P20435	155 aa		3.86	□□□□□ -1.79
SKI8	YGL213C	ERG2	P32352	222 aa		3.86	□□□□□ -1.79
SKI8	YGL213C	VPS21	P36017	210 aa	Known RBP	3.86	□□□□□ -1.79
SKI8	YGL213C	SIP3	P38717	1229 aa		3.86	□□□□□ -1.79
SKI8	YGL213C	COX15	P40086	486 aa		3.86	□□□□□ -1.79
SKI8	YGL213C	RPC17	P47076	161 aa		3.86	□□□□□ -1.79
SKI8	YGL213C	CTF19	Q02732	369 aa		3.86	□□□□□ -1.79
SKI8	YGL213C	HMT1	P38074	348 aa		3.85	□□□□□ -1.79
SKI8	YGL213C	MAL32	P38158	584 aa		3.85	□□□□□ -1.79
SKI8	YGL213C	YBR096W	P38256	230 aa		3.85	□□□□□ -1.79
SKI8	YGL213C	CUE1	P38428	203 aa		3.85	□□□□□ -1.79
SKI8	YGL213C	SYS1	P41544	203 aa		3.85	□□□□□ -1.79
SKI8	YGL213C	YGR067C	P53243	804 aa		3.85	□□□□□ -1.79
SKI8	YGL213C	MAL12	P53341	584 aa		3.85	□□□□□ -1.79
SKI8	YGL213C	DXO1	Q06349	442 aa		3.85	□□□□□ -1.79
SKI8	YGL213C	YPR147C	Q06522	304 aa	Known RBP	3.85	□□□□□ -1.79
SKI8	YGL213C	YPL150W	Q12152	901 aa		3.85	□□□□□ -1.79
SKI8	YGL213C	FUS3	P16892	353 aa	Known RBP	3.84	□□□□□ -1.79
SKI8	YGL213C	YHI9	P38765	294 aa		3.84	□□□□□ -1.79
SKI8	YGL213C	COQ10	Q08058	207 aa		3.84	□□□□□ -1.79
SKI8	YGL213C	YKR104W	P0CE69	306 aa		3.83	□□□□□ -1.8
SKI8	YGL213C	CPT1	P17898	393 aa		3.83	□□□□□ -1.8
SKI8	YGL213C	STE18	P18852	110 aa		3.83	□□□□□ -1.8
SKI8	YGL213C	YCR102C	P25608	368 aa		3.83	□□□□□ -1.8
SKI8	YGL213C	SNZ3	P43545	298 aa		3.83	□□□□□ -1.8
SKI8	YGL213C	SNZ2	P53824	298 aa		3.83	□□□□□ -1.8
SKI8	YGL213C	AAH1	P53909	347 aa		3.83	□□□□□ -1.8
SKI8	YGL213C	YMR31	P19955	123 aa		3.82	□□□□□ -1.8
SKI8	YGL213C	EHD3	P28817	500 aa		3.82	□□□□□ -1.8
SKI8	YGL213C	MRPL39	P36533	70 aa		3.82	□□□□□ -1.8
SKI8	YGL213C	RIB1	P38066	345 aa		3.82	□□□□□ -1.8
SKI8	YGL213C	GOS1	P38736	223 aa		3.82	□□□□□ -1.8
SKI8	YGL213C	UFD1	P53044	361 aa		3.82	□□□□□ -1.8
SKI8	YGL213C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
SKI8	YGL213C	SMD1	Q02260	146 aa	Predicted RBP	3.82	□□□□□ -1.8
SKI8	YGL213C	ECM11	Q04110	302 aa		3.82	□□□□□ -1.8
SKI8	YGL213C	SPG4	Q04438	115 aa		3.82	□□□□□ -1.8
SKI8	YGL213C	PIN3	Q06449	215 aa		3.82	□□□□□ -1.8
SKI8	YGL213C	ATG5	Q12380	294 aa		3.82	□□□□□ -1.8
SKI8	YGL213C	PRP18	P33411	251 aa	Predicted RBP	3.81	□□□□□ -1.8
SKI8	YGL213C	MID2	P36027	376 aa		3.81	□□□□□ -1.8
SKI8	YGL213C	CBT1	P36038	271 aa	Predicted RBP	3.81	□□□□□ -1.8
SKI8	YGL213C	YBL081W	P38180	368 aa	Known RBP	3.81	□□□□□ -1.8
SKI8	YGL213C	ARN2	P38724	620 aa		3.81	□□□□□ -1.8
SKI8	YGL213C	YHR127W	P38833	243 aa	Known RBP	3.81	□□□□□ -1.8
SKI8	YGL213C	YRB1	P41920	201 aa	Known RBP	3.81	□□□□□ -1.8
SKI8	YGL213C	FLC3	P53121	802 aa		3.81	□□□□□ -1.8
SKI8	YGL213C	RRP40	Q08285	240 aa	Known RBP	3.81	□□□□□ -1.8
SKI8	YGL213C	YLR126C	Q12288	251 aa		3.81	□□□□□ -1.8
SKI8	YGL213C	NCB2	Q92317	146 aa		3.81	□□□□□ -1.8
SKI8	YGL213C	SEY1	Q99287	776 aa		3.81	□□□□□ -1.8
SKI8	YGL213C	YBR121C-A	P0C5L4	52 aa		3.8	□□□□□ -1.8
SKI8	YGL213C	CSG2	P35206	410 aa		3.8	□□□□□ -1.8
SKI8	YGL213C	YHL044W	P38727	235 aa		3.8	□□□□□ -1.8
SKI8	YGL213C	RAD17	P48581	401 aa		3.8	□□□□□ -1.8
SKI8	YGL213C	OSH6	Q02201	448 aa		3.8	□□□□□ -1.8
SKI8	YGL213C	YMR166C	Q03829	368 aa		3.8	□□□□□ -1.8
SKI8	YGL213C	SSQ1	Q05931	657 aa	Predicted RBP	3.8	□□□□□ -1.8
SKI8	YGL213C	CDC33	P07260	213 aa	Known RBP	3.79	□□□□□ -1.8
SKI8	YGL213C	CUP2	P15315	225 aa		3.79	□□□□□ -1.8
SKI8	YGL213C	PRE7	P23724	241 aa	Known RBP	3.79	□□□□□ -1.8
SKI8	YGL213C	CDC10	P25342	322 aa	Known RBP	3.79	□□□□□ -1.8
SKI8	YGL213C	SSO1	P32867	290 aa		3.79	□□□□□ -1.8
SKI8	YGL213C	RTC3	P38804	111 aa	Predicted RBP	3.79	□□□□□ -1.8
SKI8	YGL213C	ERG28	P40030	148 aa		3.79	□□□□□ -1.8
SKI8	YGL213C	PRE6	P40303	254 aa	Known RBP	3.79	□□□□□ -1.8
SKI8	YGL213C	NIF3	P53081	288 aa		3.79	□□□□□ -1.8
SKI8	YGL213C	RSM27	P53305	110 aa		3.79	□□□□□ -1.8
SKI8	YGL213C	TVP15	Q03860	143 aa		3.79	□□□□□ -1.8
SKI8	YGL213C	YPS3	Q12303	508 aa		3.79	□□□□□ -1.8
SKI8	YGL213C	YBL008W-A	Q3E821	79 aa		3.79	□□□□□ -1.8
SKI8	YGL213C	SAC3	P46674	1301 aa		3.78	□□□□□ -1.8
SKI8	YGL213C	YEL009C-A	A0A023PZF2	135 aa		3.78	□□□□□ -1.8
SKI8	YGL213C	SOD1	P00445	154 aa	Known RBP	3.78	□□□□□ -1.8
SKI8	YGL213C	YAK1	P14680	807 aa		3.78	□□□□□ -1.8
SKI8	YGL213C	YKL075C	P36083	450 aa		3.78	□□□□□ -1.8
SKI8	YGL213C	DRE2	P36152	348 aa		3.78	□□□□□ -1.8
SKI8	YGL213C	TRR2	P38816	342 aa		3.78	□□□□□ -1.8
SKI8	YGL213C	GIM3	P53900	129 aa		3.78	□□□□□ -1.8
SKI8	YGL213C	YPL039W	Q03080	316 aa		3.78	□□□□□ -1.8
SKI8	YGL213C	MRPS17	Q03246	237 aa	Predicted RBP	3.78	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms