RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W YML108WQ03759 105 aa5.39□□□□□ -1.55
RPN11YFR004W SSY1Q03770 852 aa5.39□□□□□ -1.55
RPN11YFR004W VBA1Q04301 562 aa5.39□□□□□ -1.55
RPN11YFR004W SMA2Q04658 369 aa5.39□□□□□ -1.55
RPN11YFR004W HRT1Q08273 121 aa5.39□□□□□ -1.55
RPN11YFR004W YOR365CQ08844 703 aa5.39□□□□□ -1.55
RPN11YFR004W YOR097CQ12274 175 aaPredicted RBP5.39□□□□□ -1.55
RPN11YFR004W QCR7P00128 127 aa5.38□□□□□ -1.55
RPN11YFR004W URA3P03962 267 aa5.38□□□□□ -1.55
RPN11YFR004W RPL20AP0CX23 172 aaKnown RBP5.38□□□□□ -1.55
RPN11YFR004W RPL20BP0CX24 172 aaPredicted RBP5.38□□□□□ -1.55
RPN11YFR004W GLK1P17709 500 aaKnown RBP5.38□□□□□ -1.55
RPN11YFR004W CPR2P23285 205 aa5.38□□□□□ -1.55
RPN11YFR004W FUN19P28003 413 aaPredicted RBP5.38□□□□□ -1.55
RPN11YFR004W ATS1P31386 333 aa5.38□□□□□ -1.55
RPN11YFR004W MDH3P32419 343 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
RPN11YFR004W ERG24P32462 438 aaKnown RBP5.38□□□□□ -1.55
RPN11YFR004W APL3P38065 1025 aa5.38□□□□□ -1.55
RPN11YFR004W CHK1P38147 527 aa5.38□□□□□ -1.55
RPN11YFR004W RRF1P38771 230 aa5.38□□□□□ -1.55
RPN11YFR004W RPP1P38786 293 aa5.38□□□□□ -1.55
RPN11YFR004W SKN7P38889 622 aa5.38□□□□□ -1.55
RPN11YFR004W YEL057CP39983 233 aa5.38□□□□□ -1.55
RPN11YFR004W YNL208WP40159 199 aaKnown RBP5.38□□□□□ -1.55
RPN11YFR004W UTP25P40498 721 aaKnown RBP5.38□□□□□ -1.55
RPN11YFR004W ICE2P40499 491 aa5.38□□□□□ -1.55
RPN11YFR004W ECM27P47144 725 aa5.38□□□□□ -1.55
RPN11YFR004W LYS20P48570 428 aaKnown RBP5.38□□□□□ -1.55
RPN11YFR004W YGL235WP53071 178 aa5.38□□□□□ -1.55
RPN11YFR004W YGR042WP53227 271 aa5.38□□□□□ -1.55
RPN11YFR004W SCS7Q03529 384 aa5.38□□□□□ -1.55
RPN11YFR004W YMR210WQ03649 449 aa5.38□□□□□ -1.55
RPN11YFR004W UTP21Q06078 939 aaPredicted RBP5.38□□□□□ -1.55
RPN11YFR004W AIM6Q07716 390 aa5.38□□□□□ -1.55
RPN11YFR004W YOR376WQ08900 122 aa5.38□□□□□ -1.55
RPN11YFR004W FRE3Q08905 711 aa5.38□□□□□ -1.55
RPN11YFR004W RTC5Q12108 567 aaKnown RBP5.38□□□□□ -1.55
RPN11YFR004W LYS21Q12122 440 aaKnown RBP5.38□□□□□ -1.55
RPN11YFR004W GLT1Q12680 2145 aaKnown RBP5.38□□□□□ -1.55
RPN11YFR004W AAC1P04710 309 aa5.37□□□□□ -1.55
RPN11YFR004W BAR1P12630 587 aa5.37□□□□□ -1.55
RPN11YFR004W GAS1P22146 559 aaKnown RBP5.37□□□□□ -1.55
RPN11YFR004W CNE1P27825 502 aa5.37□□□□□ -1.55
RPN11YFR004W ACB1P31787 87 aa5.37□□□□□ -1.55
RPN11YFR004W SFK1P35735 353 aa5.37□□□□□ -1.55
RPN11YFR004W ALB1P47019 175 aaPredicted RBP5.37□□□□□ -1.55
RPN11YFR004W PRY1P47032 299 aa5.37□□□□□ -1.55
RPN11YFR004W FMP48P53233 369 aa5.37□□□□□ -1.55
RPN11YFR004W YGR067CP53243 804 aa5.37□□□□□ -1.55
RPN11YFR004W OGG1P53397 376 aaPredicted RBP5.37□□□□□ -1.55
RPN11YFR004W ASI3P53983 676 aa5.37□□□□□ -1.55
RPN11YFR004W GAS2Q06135 555 aa5.37□□□□□ -1.55
RPN11YFR004W KEI1Q06346 221 aa5.37□□□□□ -1.55
RPN11YFR004W YLR352WQ06479 807 aa5.37□□□□□ -1.55
RPN11YFR004W YPR127WQ06494 345 aa5.37□□□□□ -1.55
RPN11YFR004W YPR174CQ06616 221 aaPredicted RBP5.37□□□□□ -1.55
RPN11YFR004W RDR1Q08904 546 aa5.37□□□□□ -1.55
RPN11YFR004W PSF1Q12488 208 aa5.37□□□□□ -1.55
RPN11YFR004W COX9P07255 59 aa5.36□□□□□ -1.55
RPN11YFR004W GCD1P09032 578 aaPredicted RBP5.36□□□□□ -1.55
RPN11YFR004W DSF1P0CX08 502 aa5.36□□□□□ -1.55
RPN11YFR004W YNR073CP0CX09 502 aa5.36□□□□□ -1.55
RPN11YFR004W NHP6BP11633 99 aaKnown RBP5.36□□□□□ -1.55
RPN11YFR004W CDC23P16522 626 aa5.36□□□□□ -1.55
RPN11YFR004W CKS1P20486 150 aaKnown RBP5.36□□□□□ -1.55
RPN11YFR004W RPS0AP32905 252 aaKnown RBP5.36□□□□□ -1.55
RPN11YFR004W YKL071WP36086 256 aa5.36□□□□□ -1.55
RPN11YFR004W NAT2P37293 288 aa5.36□□□□□ -1.55
RPN11YFR004W GEP4P38812 185 aa5.36□□□□□ -1.55
RPN11YFR004W PEX7P39108 375 aa5.36□□□□□ -1.55
RPN11YFR004W VHT1P53241 593 aa5.36□□□□□ -1.55
RPN11YFR004W SLI1P53304 468 aa5.36□□□□□ -1.55
RPN11YFR004W BUD25P85052 153 aa5.36□□□□□ -1.55
RPN11YFR004W ARG5,6Q01217 863 aa5.36□□□□□ -1.55
RPN11YFR004W UTP15Q04305 513 aaKnown RBP5.36□□□□□ -1.55
RPN11YFR004W ASM4Q05166 528 aa5.36□□□□□ -1.55
RPN11YFR004W DCR2Q05924 578 aa5.36□□□□□ -1.55
RPN11YFR004W YPR172WQ06608 200 aa5.36□□□□□ -1.55
RPN11YFR004W YEH1Q07804 573 aa5.36□□□□□ -1.55
RPN11YFR004W FEX1Q08913 375 aa5.36□□□□□ -1.55
RPN11YFR004W BTS1Q12051 335 aa5.36□□□□□ -1.55
RPN11YFR004W ATP14Q12349 124 aa5.36□□□□□ -1.55
RPN11YFR004W PRB1P09232 635 aa5.35□□□□□ -1.55
RPN11YFR004W UTR1P21373 530 aa5.35□□□□□ -1.55
RPN11YFR004W DCG1P32460 244 aa5.35□□□□□ -1.55
RPN11YFR004W OM14P38325 134 aa5.35□□□□□ -1.55
RPN11YFR004W VBA2P38358 474 aaKnown RBP5.35□□□□□ -1.55
RPN11YFR004W BRR6P53062 197 aa5.35□□□□□ -1.55
RPN11YFR004W MPA43P53583 542 aaPredicted RBP5.35□□□□□ -1.55
RPN11YFR004W NCE101Q02820 53 aa5.35□□□□□ -1.55
RPN11YFR004W PRM15Q03262 622 aa5.35□□□□□ -1.55
RPN11YFR004W PEX30Q06169 523 aa5.35□□□□□ -1.55
RPN11YFR004W STP4Q07351 490 aa5.35□□□□□ -1.55
RPN11YFR004W YLR031WQ07978 186 aa5.35□□□□□ -1.55
RPN11YFR004W REX3Q12090 404 aa5.35□□□□□ -1.55
RPN11YFR004W YDL109CQ12103 647 aa5.35□□□□□ -1.55
RPN11YFR004W YDR215CQ12240 137 aa5.35□□□□□ -1.55
RPN11YFR004W ARG80P07249 177 aa5.34□□□□□ -1.55
RPN11YFR004W YSF3P0C074 85 aaPredicted RBP5.34□□□□□ -1.55
RPN11YFR004W RPB8P20436 146 aa5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms