RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC48	YDL126C	GNA1	P43577	159 aa	Predicted RBP	4.12	□□□□□ -1.75
CDC48	YDL126C	BOL2	P53082	120 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	ROG1	P53118	685 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	CLD1	P53264	445 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	RSM27	P53305	110 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	SLM2	P53955	656 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	MRP51	Q02950	344 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	CTL1	Q03220	320 aa	Known RBP	4.12	□□□□□ -1.75
CDC48	YDL126C	IZH1	Q03419	316 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	YMR130W	Q04223	302 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	TVP18	Q04767	167 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	YDL086W	Q07505	273 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	RFU1	Q08003	200 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	ATX2	Q12067	313 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	YOR342C	Q12182	319 aa		4.12	□□□□□ -1.75
CDC48	YDL126C	PRP46	Q12417	451 aa	Predicted RBP	4.12	□□□□□ -1.75
CDC48	YDL126C	PUT2	P07275	575 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	EPT1	P22140	391 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	AIM17	P23180	465 aa	Known RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	RBK1	P25332	333 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	DEG1	P31115	442 aa	Known RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	AEP1	P32493	518 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	PRP21	P32524	280 aa	Predicted RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	YMR144W	P40214	342 aa	Known RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	LSM3	P57743	89 aa	Known RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	YPL014W	Q02606	381 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	OST6	Q03723	332 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	NEJ1	Q06148	342 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	FRQ1	Q06389	190 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	CYK3	Q07533	885 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	YPR202W	Q08993	238 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	MDM32	Q12171	622 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	SPO24	Q3E752	67 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	COX1	P00401	534 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	AMD1	P15274	810 aa	Known RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	CPR4	P25334	318 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	YCR099C	P25657	155 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	CYS4	P32582	507 aa	Known RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	COA1	P40452	197 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	SPG5	P42933	373 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	YFR057W	P43625	151 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	MRX5	P47007	382 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	VPS73	P53142	486 aa	Known RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	MPC1	P53157	130 aa	Known RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	SMX3	P54999	86 aa	Predicted RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	PRP38	Q00723	242 aa	Predicted RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	AAT1	Q01802	451 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	YOR283W	Q12040	230 aa	Known RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	SPC3	Q12133	184 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	PEX11	Q12462	236 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.11	□□□□□ -1.75
CDC48	YDL126C	YBR298C-A	Q8TGK4	73 aa		4.11	□□□□□ -1.75
CDC48	YDL126C	QCR7	P00128	127 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	MRP1	P10662	321 aa	Known RBP	4.1	□□□□□ -1.75
CDC48	YDL126C	SNF4	P12904	322 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	CCA1	P21269	546 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	SRB6	P32570	121 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	YBR144C	P34215	104 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	TCM62	P38228	572 aa	Known RBP	4.1	□□□□□ -1.75
CDC48	YDL126C	ICS2	P38284	255 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	ELO1	P39540	310 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	ERG28	P40030	148 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	TES1	P41903	349 aa	Known RBP	4.1	□□□□□ -1.75
CDC48	YDL126C	AIM23	P47015	356 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	MNN10	P50108	393 aa	Known RBP	4.1	□□□□□ -1.75
CDC48	YDL126C	FMP48	P53233	369 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	IBD2	P53892	351 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	YMR206W	Q03695	313 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	YDR387C	Q04162	555 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	YET2	Q04210	160 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	HRD1	Q08109	551 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	NDD1	Q08887	554 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	YPL247C	Q12523	523 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	YKL183C-A	Q3E765	70 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	YER175W-A	Q8TGU4	54 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	UBA3	Q99344	299 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	HEM2	P05373	342 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	QCR2	P07257	368 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	SEC59	P20048	519 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	RPS1B	P23248	255 aa	Known RBP	4.1	□□□□□ -1.75
CDC48	YDL126C	PEX34	P25584	144 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	LAC1	P28496	418 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	PRS4	P38063	326 aa	Predicted RBP	4.1	□□□□□ -1.75
CDC48	YDL126C	ARN1	P38731	627 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	YJL016W	P47072	561 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	PIR1	Q03178	341 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	CCE1	Q03702	353 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	YMR087W	Q04299	284 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	YPR114W	Q06107	315 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	MRH1	Q12117	320 aa	Predicted RBP	4.1	□□□□□ -1.75
CDC48	YDL126C	RNH203	Q12338	110 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	ICT1	Q12385	394 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	WIP1	Q2V2P8	89 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	RIB3	Q99258	208 aa		4.1	□□□□□ -1.75
CDC48	YDL126C	YDR157W	A0A023PZE8	133 aa		4.09	□□□□□ -1.75
CDC48	YDL126C	ALG7	P07286	448 aa		4.09	□□□□□ -1.75
CDC48	YDL126C	NAM2	P11325	894 aa		4.09	□□□□□ -1.75
CDC48	YDL126C	PRE7	P23724	241 aa	Known RBP	4.09	□□□□□ -1.75
CDC48	YDL126C	GPI12	P23797	304 aa		4.09	□□□□□ -1.75
CDC48	YDL126C	PRP18	P33411	251 aa	Predicted RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms